Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc504.5 Carica papaya HOM05D003663 ORTHO05D005327 1.4e-137 493.0 268 100.0
Duzib177G0557 Durio zibethinus HOM05D003663 ORTHO05D005327 3.7e-53 212.6 238 52.9
Duzib106G1874 Durio zibethinus HOM05D003663 ORTHO05D005327 1.2e-51 207.6 239 51.9
TWI34G0428 Tripterygium wilfordii HOM05D003663 ORTHO05D005327 1.6e-48 197.2 213 54.9
QL09p023778 Quercus lobata HOM05D003663 ORTHO05D005327 2.1e-48 196.8 224 50.4
Rhsim09G0213000 Rhododendron simsii HOM05D003663 ORTHO05D005327 7.9e-48 194.9 221 51.6
Manes.09G126900 Manihot esculenta HOM05D003663 ORTHO05D005327 1.0e-47 194.5 222 52.3
Nitab4.5_0000021g0580 Nicotiana tabacum HOM05D003663 ORTHO05D005327 1.1e-46 191.0 235 47.7
Potri.019G049600 Populus trichocarpa HOM05D003663 ORTHO05D005327 1.5e-46 190.7 239 49.8
Gohir.D11G318900 Gossypium hirsutum HOM05D003663 ORTHO05D005327 4.4e-46 189.1 134 68.7
Gorai.007G348900 Gossypium raimondii HOM05D003663 ORTHO05D005327 4.4e-46 189.1 134 68.7
Gohir.A11G303600 Gossypium hirsutum HOM05D003663 ORTHO05D005327 7.4e-46 188.3 134 67.9
Haze_00422 Corylus avellana HOM05D003663 ORTHO05D005327 1.7e-45 187.2 240 48.8
Peaxi162Scf00815g00311 Petunia axillaris HOM05D003663 ORTHO05D005327 2.2e-45 186.8 181 55.2
CiPaw.06G032900 Carya illinoinensis HOM05D003663 ORTHO05D005327 2.8e-45 186.4 238 47.1
Sabra19G0059300 Salix brachista HOM05D003663 ORTHO05D005327 3.7e-45 186.0 217 49.8
Duzib128G0448 Durio zibethinus HOM05D003663 ORTHO05D005327 1.8e-44 183.7 191 53.9
Nitab4.5_0001762g0070 Nicotiana tabacum HOM05D003663 ORTHO05D005327 2.4e-44 183.3 232 47.8
Lalb_Chr05g0220821 Lupinus albus HOM05D003663 ORTHO05D005327 5.3e-44 182.2 229 48.0
vmacro22176 Vaccinium macrocarpon HOM05D003663 ORTHO05D005327 9.1e-44 181.4 210 49.5
Oeu027885.1 Olea europaea HOM05D003663 ORTHO05D005327 1.5e-43 180.6 199 50.3
Lj4g0026545 Lotus japonicus HOM05D003663 ORTHO05D005327 2.6e-43 179.9 234 45.7
Cfa016035 Carpinus fangiana HOM05D003663 ORTHO05D005327 3.5e-43 179.5 171 55.6
Hma1.2p1_1680F.1_g297170 Hydrangea macrophylla HOM05D003663 ORTHO05D005327 7.7e-43 178.3 238 47.9
Oeu060390.1 Olea europaea HOM05D002083 ORTHO05D000332 1.3e-42 177.6 194 53.1
Psat4g076520 Pisum sativum HOM05D003663 ORTHO05D005327 1.3e-42 177.6 211 48.3
CANSAT21G0248 Cannabis sativa HOM05D003663 ORTHO05D005327 3.8e-42 176.0 232 47.0
Ciclev10021912m.g Citrus clementina HOM05D003663 ORTHO05D005327 6.5e-42 175.3 198 50.5
Lsat_1_v5_gn_2_136720 Lactuca sativa HOM05D003663 ORTHO05D005327 8.5e-42 174.9 196 51.0
COL.COLO4_06064 Corchorus olitorius HOM05D003663 ORTHO05D005327 1.1e-41 174.5 200 52.5
Lj3P887T57 Lonicera japonica HOM05D003663 ORTHO05D005327 1.1e-41 174.5 179 52.5
CAN.G65.131 Capsicum annuum HOM05D003663 ORTHO05D005327 7.2e-41 171.8 230 45.7
CSS0037566 Camellia sinensis var. sinensis HOM05D003663 ORTHO05D005327 9.4e-41 171.4 175 55.4
MBI04_g20973_MAGBIO Magnolia biondii HOM05D003663 ORTHO05D005327 1.6e-40 170.6 211 47.9
Medtr4g099150 Medicago truncatula HOM05D003663 ORTHO05D005327 1.6e-40 170.6 233 42.1
TAR374G1477 Trochodendron aralioides HOM05D003663 ORTHO05D005327 1.6e-40 170.6 199 49.2
VMungo0251G1526 Vigna mungo HOM05D003663 ORTHO05D005327 1.6e-40 170.6 228 44.7
TPR.G17125 Trifolium pratense HOM05D003663 ORTHO05D005327 4.7e-40 169.1 173 52.6
Phvul.003G226500 Phaseolus vulgaris HOM05D003663 ORTHO05D005327 6.1e-40 168.7 211 46.4
Aqoxy3G02161 Aquilegia oxysepala HOM05D003663 ORTHO05D005327 8.0e-40 168.3 159 56.0
Glyma.17G149700 Glycine max HOM05D003663 ORTHO05D005327 1.0e-39 167.9 198 50.0
Nn3g19378 Nelumbo nucifera HOM05D003663 ORTHO05D005327 1.4e-39 167.5 150 59.3
Ah.13g072750 Amaranthus hybridus HOM05D003663 ORTHO05D005327 1.8e-39 167.2 198 48.5
AUR62002065 Chenopodium quinoa HOM05D003663 ORTHO05D005327 3.9e-39 166.0 223 44.8
EL10Ac3g05074 Beta vulgaris HOM05D003663 ORTHO05D005327 5.2e-39 165.6 169 54.4
BolC2t06783H Brassica oleracea HOM05D003663 ORTHO05D005327 2.0e-38 163.7 159 56.0
BcaNung00434 Brassica carinata HOM05D003663 ORTHO05D005327 2.6e-38 163.3 159 56.6
CARHR196240 Cardamine hirsuta HOM05D003663 ORTHO05D005327 3.3e-38 162.9 193 49.2
BcaC03g18525 Brassica carinata HOM05D003663 ORTHO05D005327 5.7e-38 162.2 159 55.3
C02p08670 Brassica napus HOM05D003663 ORTHO05D005327 5.7e-38 162.2 159 55.3
Sopen06g029160 Solanum pennellii HOM05D003663 ORTHO05D005327 5.7e-38 162.2 156 51.9
A02p03870 Brassica napus HOM05D003663 ORTHO05D005327 7.4e-38 161.8 159 55.3
DCAR_010543 Daucus carota HOM05D003663 ORTHO05D005327 7.4e-38 161.8 185 49.7
Rhsim03G0221600 Rhododendron simsii HOM05D003663 ORTHO05D005327 9.7e-38 161.4 178 51.7
PGSC0003DMG400027034 Solanum tuberosum HOM05D003663 ORTHO05D005327 9.7e-38 161.4 189 47.1
Carub.0006s1513 Capsella rubella HOM05D003663 ORTHO05D005327 1.3e-37 161.0 155 53.5
Sc13g0010870 Simmondsia chinensis HOM05D003663 ORTHO05D005327 1.3e-37 161.0 137 58.4
BraA02t05351Z Brassica rapa HOM05D003663 ORTHO05D005327 1.7e-37 160.6 158 55.7
AL6G27920 Arabidopsis lyrata HOM05D003663 ORTHO05D005327 2.2e-37 160.2 189 50.3
Sp6g27190 Schrenkiella parvula HOM05D003663 ORTHO05D005327 4.8e-37 159.1 201 50.2
AT5G16920 Arabidopsis thaliana HOM05D003663 ORTHO05D005327 8.2e-37 158.3 156 54.5
THA.LOC104827213 Tarenaya hassleriana HOM05D003663 ORTHO05D005327 8.2e-37 158.3 200 49.5
HanXRQChr14g0462981 Helianthus annuus HOM05D003663 ORTHO05D005327 1.8e-36 157.1 174 50.6
Thhalv10014405m.g Eutrema salsugineum HOM05D003663 ORTHO05D005327 3.1e-36 156.4 228 43.4
PGR142G2930 Punica granatum HOM05D003663 ORTHO05D005327 4.1e-36 156.0 152 51.3
Eucgr.K00086 Eucalyptus grandis HOM05D003663 ORTHO05D005327 7.0e-36 155.2 167 50.9
ECA233G1163 Erigeron canadensis HOM05D003663 ORTHO05D005327 1.6e-35 154.1 200 46.5
PSO063G6858 Papaver somniferum HOM05D003663 ORTHO05D005327 2.6e-35 153.3 211 45.0
Prupe.2G326500 Prunus persica HOM05D003663 ORTHO05D005327 2.6e-35 153.3 148 56.8
PSO782G5365 Papaver somniferum HOM05D003663 ORTHO05D005327 4.5e-35 152.5 189 47.6
SalBow2G0094 Salvia bowleyana HOM05D003663 ORTHO05D005327 4.5e-35 152.5 175 49.7
Thecc.05G213800 Theobroma cacao HOM05D003663 ORTHO05D005327 1.3e-34 151.0 238 44.1
SGA_v2.0_scaffold50G18444 Striga asiatica HOM05D003663 ORTHO05D005327 5.0e-34 149.1 171 46.8
Cc00_g28240 Coffea canephora HOM05D003663 ORTHO05D005327 6.5e-34 148.7 208 46.2
Migut.F00942 Erythranthe guttata HOM05D003663 ORTHO05D005327 8.0e-32 141.7 155 48.4
ATR0829G139 Amborella trichopoda HOM05D003663 ORTHO05D005327 2.6e-30 136.7 230 37.0
Actinidia33794 Actinidia chinensis HOM05D003663 ORTHO05D005327 1.0e-26 124.8 107 57.0
Glyma.14G007200 Glycine max HOM05D003663 ORTHO05D005327 1.0e-26 124.8 153 43.1
Os12g0233900 Oryza sativa ssp. japonica HOM05D003663 ORTHO05D005327 3.8e-26 122.9 212 35.8
Ca_06459_v3 Cicer arietinum L. HOM05D003663 ORTHO05D005327 4.2e-25 119.4 153 44.4
LjContig00081g0009748 Lotus japonicus HOM05D003663 ORTHO05D005327 7.2e-25 118.6 168 40.5
Phvul.008G285700 Phaseolus vulgaris HOM05D003663 ORTHO05D005327 1.6e-24 117.5 151 42.4
arahy.Tifrunner.gnm1.ann1.5NF29Y Arachis hypogaea HOM05D003663 ORTHO05D005327 3.6e-24 116.3 134 42.5
arahy.Tifrunner.gnm1.ann1.CR9YGF Arachis hypogaea HOM05D003663 ORTHO05D005327 3.6e-24 116.3 134 42.5
arahy.Tifrunner.gnm1.ann1.8QBK2E Arachis hypogaea HOM05D003663 ORTHO05D005327 1.0e-23 114.8 174 37.4
arahy.Tifrunner.gnm1.ann1.P7DY53 Arachis hypogaea HOM05D003663 ORTHO05D005327 1.0e-23 114.8 174 37.4
TPR.G10569 Trifolium pratense HOM05D003663 ORTHO05D005327 1.0e-23 114.8 134 41.8
Psat2g004440 Pisum sativum HOM05D003663 ORTHO05D005327 1.4e-23 114.4 168 41.1
Nn1g03229 Nelumbo nucifera HOM05D003663 ORTHO05D005327 2.3e-23 113.6 134 41.8
VMungo0647G1338 Vigna mungo HOM05D003663 ORTHO05D005327 2.3e-23 113.6 162 38.3
Medtr5g097370 Medicago truncatula HOM05D003663 ORTHO05D005327 3.0e-23 113.2 158 41.8
TPR.G1287 Trifolium pratense HOM05D003663 ORTHO05D005327 1.2e-22 111.3 152 40.1
Aqoxy3G02718 Aquilegia oxysepala HOM05D003663 ORTHO05D005327 1.5e-22 110.9 167 34.7
Prupe.4G006800 Prunus persica HOM05D003663 ORTHO05D005327 1.5e-22 110.9 137 40.9
Lj6g0026147 Lotus japonicus HOM05D003663 ORTHO05D005327 2.0e-22 110.5 129 42.6
TAR627G0054 Trochodendron aralioides HOM05D003663 ORTHO05D005327 2.0e-22 110.5 163 40.5
Ca_00744_v3 Cicer arietinum L. HOM05D003663 ORTHO05D005327 4.4e-22 109.4 134 40.3
VMungo0540G0424 Vigna mungo HOM05D003663 ORTHO05D005327 7.5e-22 108.6 138 42.0
Lalb_Chr17g0349111 Lupinus albus HOM05D003663 ORTHO05D005327 2.2e-21 107.1 136 40.4
Hma1.2p1_2614F.1_g325410 Hydrangea macrophylla HOM05D003663 ORTHO05D005327 3.7e-21 106.3 154 38.3
Lalb_Chr20g0119391 Lupinus albus HOM05D003663 ORTHO05D005327 3.7e-21 106.3 137 39.4
TWI36G0551 Tripterygium wilfordii HOM05D003663 ORTHO05D005327 3.7e-21 106.3 155 38.1
Hma1.2p1_1267F.1_g271530 Hydrangea macrophylla HOM05D003663 ORTHO05D005327 4.8e-21 105.9 154 38.3
Nn1g01862 Nelumbo nucifera HOM05D003663 ORTHO05D005327 4.8e-21 105.9 129 47.3
Phvul.006G141400 Phaseolus vulgaris HOM05D003663 ORTHO05D005327 4.8e-21 105.9 138 40.6
Glyma.09G012100 Glycine max HOM05D003663 ORTHO05D005327 1.4e-20 104.4 138 40.6
FAN25G1738 Fragaria x ananassa HOM05D003663 ORTHO05D005327 3.1e-20 103.2 143 37.8
ATR0624G116 Amborella trichopoda HOM05D003663 ORTHO05D005327 4.1e-20 102.8 167 33.5
Psat1g178200 Pisum sativum HOM05D003663 ORTHO05D005327 5.4e-20 102.4 134 37.3
FvH4_3g00560 Fragaria vesca HOM05D003663 ORTHO05D005327 1.2e-19 101.3 143 36.4
Lalb_Chr16g0386341 Lupinus albus HOM05D003663 ORTHO05D005327 2.7e-19 100.1 101 52.5
Aqoxy1G04227 Aquilegia oxysepala HOM05D003663 ORTHO05D005327 4.5e-19 99.4 149 38.3
MELO3C024107.2 Cucumis melo HOM05D003663 ORTHO05D005327 4.5e-19 99.4 153 37.3
MELO3C028604.2 Cucumis melo HOM05D003663 ORTHO05D005327 2.9e-18 96.7 141 38.3
TWI38G0283 Tripterygium wilfordii HOM05D003663 ORTHO05D005327 3.8e-18 96.3 136 35.3
A09p05770 Brassica napus HOM05D003663 ORTHO05D005327 8.6e-18 95.1 163 35.0
BraA09t36218Z Brassica rapa HOM05D003663 ORTHO05D005327 8.6e-18 95.1 163 35.0
ClCG02G002710 Citrullus lanatus HOM05D003663 ORTHO05D005327 8.6e-18 95.1 128 39.8
CsaV3_7G023690 Cucumis sativus L. HOM05D003663 ORTHO05D005327 1.1e-17 94.7 153 36.6
Sed0016160 Sechium edule HOM05D003663 ORTHO05D005327 1.5e-17 94.4 134 41.0
Sed0003500 Sechium edule HOM05D003663 ORTHO05D005327 1.9e-17 94.0 128 39.8
Aqoxy1G04229 Aquilegia oxysepala HOM05D003663 ORTHO05D005327 2.5e-17 93.6 143 32.9
Eucgr.L03441 Eucalyptus grandis HOM05D003663 ORTHO05D005327 4.2e-17 92.8 117 41.9
Potri.006G016700 Populus trichocarpa HOM05D003663 ORTHO05D005327 4.2e-17 92.8 118 39.8
BcaB04g19727 Brassica carinata HOM05D003663 ORTHO05D005327 5.5e-17 92.4 160 34.4
BolC9t53556H Brassica oleracea HOM05D003663 ORTHO05D005327 7.2e-17 92.0 157 33.8
BcaC04g23626 Brassica carinata HOM05D003663 ORTHO05D005327 2.8e-16 90.1 164 34.8
C09p06370 Brassica napus HOM05D003663 ORTHO05D005327 2.8e-16 90.1 164 34.8
PGR142G2458 Punica granatum HOM05D003663 ORTHO05D005327 4.7e-16 89.4 146 33.6
Aqoxy1G04228 Aquilegia oxysepala HOM05D003663 ORTHO05D005327 6.1e-16 89.0 130 38.5
CARHR186960 Cardamine hirsuta HOM05D003663 ORTHO05D005327 6.1e-16 89.0 154 36.4
Actinidia34308 Actinidia chinensis HOM05D003663 ORTHO05D005327 8.0e-16 88.6 69 62.3
BcaNung02825 Brassica carinata HOM05D003663 ORTHO05D005327 8.0e-16 88.6 171 34.5
C07p41660 Brassica napus HOM05D003663 ORTHO05D005327 8.0e-16 88.6 171 34.5
BolC7t44701H Brassica oleracea HOM05D003663 ORTHO05D005327 8.0e-16 88.6 171 34.5
A06p36830 Brassica napus HOM05D003663 ORTHO05D005327 1.8e-15 87.4 168 33.9
BraA06t26609Z Brassica rapa HOM05D003663 ORTHO05D005327 1.8e-15 87.4 168 33.9
AT5G26730 Arabidopsis thaliana HOM05D003663 ORTHO05D005327 4.0e-15 86.3 154 33.8
Sed0002316 Sechium edule HOM05D003663 ORTHO05D005327 5.2e-15 85.9 121 36.4
AL6G38450 Arabidopsis lyrata HOM05D003663 ORTHO05D005327 1.2e-14 84.7 154 33.8
THA.LOC104826655 Tarenaya hassleriana HOM05D003663 ORTHO05D005327 1.5e-14 84.3 133 37.6
BcaNung03959 Brassica carinata HOM05D003663 ORTHO05D005327 2.0e-14 84.0 169 32.5
MD09G1122000 Malus domestica HOM05D003663 ORTHO05D005327 2.0e-14 84.0 133 36.8
PSO302G0013 Papaver somniferum HOM05D003663 ORTHO05D005327 2.6e-14 83.6 160 33.1
RcHm_v2.0_Chr2g0156681 Rosa chinensis HOM05D003663 ORTHO05D005327 2.6e-14 83.6 109 34.9
Thhalv10005288m.g Eutrema salsugineum HOM05D003663 ORTHO05D005327 3.4e-14 83.2 156 32.7
PSO210G1796 Papaver somniferum HOM05D003663 ORTHO05D005327 3.4e-14 83.2 160 33.1
Carub.0006s2423 Capsella rubella HOM05D003663 ORTHO05D005327 4.4e-14 82.8 155 33.5
ClCG01G010650 Citrullus lanatus HOM05D003663 ORTHO05D005327 7.5e-14 82.0 130 34.6
Sed0020467 Sechium edule HOM05D003663 ORTHO05D005327 7.5e-14 82.0 121 34.7
Ciclev10017620m.g Citrus clementina HOM05D003663 ORTHO05D005327 1.1e-12 78.2 128 33.6
Sp2g21370 Schrenkiella parvula HOM05D003663 ORTHO05D005327 7.0e-12 75.5 125 32.8
CsaV3_7G002660 Cucumis sativus L. HOM05D003663 ORTHO05D005327 2.9e-10 70.1 97 39.2
BcaB07g29963 Brassica carinata HOM05D003663 ORTHO05D005327 6.6e-10 68.9 90 36.7
Glyma.02G305800 Glycine max HOM05D003663 ORTHO05D005327 8.6e-10 68.6 85 42.4
BcaB04g19726 Brassica carinata HOM05D003663 ORTHO05D005327 1.5e-09 67.8 159 27.0
Medtr2g026520 Medicago truncatula HOM05D003663 ORTHO05D005327 1.9e-09 67.4 97 35.1
Actinidia08745 Actinidia chinensis HOM05D000074 ORTHO05D006801 1.2e-08 64.7 64 53.1
A02p39370 Brassica napus HOM05D003663 ORTHO05D010021 1.6e-08 64.3 140 27.1
Potri.016G009000 Populus trichocarpa HOM05D003663 ORTHO05D005327 6.1e-08 62.4 60 48.3
Mapoly0095s0061 Marchantia polymorpha HOM05D005423 ORTHO05D006223 1.0e-07 61.6 221 28.1


User provided reference genes

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