Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc50.77 Carica papaya HOM05D003750 ORTHO05D004337 7.8e-119 431.0 319 100.0
CiPaw.03G189300 Carya illinoinensis HOM05D003750 ORTHO05D004337 7.5e-53 211.8 307 51.5
COL.COLO4_33737 Corchorus olitorius HOM05D003750 ORTHO05D004337 3.7e-52 209.5 336 58.6
Gohir.D04G037100 Gossypium hirsutum HOM05D003750 ORTHO05D004337 2.4e-51 206.8 321 58.9
THA.LOC104803179 Tarenaya hassleriana HOM05D003750 ORTHO05D004337 4.1e-51 206.1 318 58.5
Potri.002G060800 Populus trichocarpa HOM05D003750 ORTHO05D004337 7.0e-51 205.3 329 46.5
Gorai.012G041900 Gossypium raimondii HOM05D003750 ORTHO05D004337 1.2e-50 204.5 319 60.5
TWI14G1010 Tripterygium wilfordii HOM05D003750 ORTHO05D004337 7.7e-50 201.8 307 49.8
Gohir.A05G378400 Gossypium hirsutum HOM05D003750 ORTHO05D004337 1.3e-49 201.1 326 61.0
Atru.chr6.1510 Acer truncatum HOM05D003750 ORTHO05D004337 6.5e-49 198.7 120 76.7
Duzib187G0136 Durio zibethinus HOM05D003750 ORTHO05D004337 6.5e-49 198.7 316 57.3
TWI59G1023 Tripterygium wilfordii HOM05D003750 ORTHO05D004337 6.5e-49 198.7 310 51.6
Psat0s4925g0080 Pisum sativum HOM05D003750 ORTHO05D004337 1.5e-48 197.6 307 50.2
AT2G42840 Arabidopsis thaliana HOM05D003750 ORTHO05D004337 1.9e-48 197.2 308 55.2
Duzib264G0293 Durio zibethinus HOM05D003750 ORTHO05D004337 2.5e-48 196.8 324 55.6
QL08p043924 Quercus lobata HOM05D003750 ORTHO05D004337 4.2e-48 196.1 314 64.6
VMungo0540G2251 Vigna mungo HOM05D003750 ORTHO05D004337 5.5e-48 195.7 300 52.3
Potri.005G200900 Populus trichocarpa HOM05D003750 ORTHO05D004337 7.2e-48 195.3 331 52.9
LjContig00310g0001182 Lotus japonicus HOM05D003750 ORTHO05D004337 1.2e-47 194.5 125 73.6
arahy.Tifrunner.gnm1.ann1.Y7JGW6 Arachis hypogaea HOM05D003750 ORTHO05D004337 2.1e-47 193.7 125 74.4
Carub.0004s2528 Capsella rubella HOM05D003750 ORTHO05D004337 2.1e-47 193.7 331 55.9
arahy.Tifrunner.gnm1.ann1.UWZ29M Arachis hypogaea HOM05D003750 ORTHO05D004337 2.7e-47 193.4 125 74.4
Thhalv10016927m.g Eutrema salsugineum HOM05D003750 ORTHO05D004337 4.7e-47 192.6 328 51.2
BcaNung06740 Brassica carinata HOM05D003750 ORTHO05D004337 1.0e-46 191.4 127 70.1
A05p03190 Brassica napus HOM05D003750 ORTHO05D004337 1.0e-46 191.4 127 70.1
C04p03840 Brassica napus HOM05D003750 ORTHO05D004337 1.0e-46 191.4 127 70.1
BolC4t22020H Brassica oleracea HOM05D003750 ORTHO05D004337 1.0e-46 191.4 127 70.1
BraA05t19309Z Brassica rapa HOM05D003750 ORTHO05D004337 1.0e-46 191.4 127 70.1
Eucgr.K01198 Eucalyptus grandis HOM05D003750 ORTHO05D004337 1.0e-46 191.4 115 75.7
CARHR137920 Cardamine hirsuta HOM05D003750 ORTHO05D004337 1.8e-46 190.7 319 53.9
Psat2g014640 Pisum sativum HOM05D003750 ORTHO05D004337 1.8e-46 190.7 125 72.0
Sp4g24960 Schrenkiella parvula HOM05D003750 ORTHO05D004337 1.8e-46 190.7 127 70.1
ClCG09G022350 Citrullus lanatus HOM05D003750 ORTHO05D004337 2.3e-46 190.3 125 70.4
Haze_13489 Corylus avellana HOM05D003750 ORTHO05D004337 4.0e-46 189.5 116 75.9
Phvul.006G033900 Phaseolus vulgaris HOM05D003750 ORTHO05D004337 5.2e-46 189.1 300 52.7
Lalb_Chr17g0348311 Lupinus albus HOM05D003750 ORTHO05D004337 6.8e-46 188.7 123 73.2
Thecc.01G160900 Theobroma cacao HOM05D003750 ORTHO05D004337 6.8e-46 188.7 116 77.6
Glyma.02G287400 Glycine max HOM05D003750 ORTHO05D004337 8.8e-46 188.3 125 72.0
Lalb_Chr04g0248731 Lupinus albus HOM05D003750 ORTHO05D004337 8.8e-46 188.3 121 74.4
BcaC02g07218 Brassica carinata HOM05D003750 ORTHO05D004337 2.0e-45 187.2 126 69.8
A04p32410 Brassica napus HOM05D003750 ORTHO05D004337 2.0e-45 187.2 126 69.8
C04p69930 Brassica napus HOM05D003750 ORTHO05D004337 2.0e-45 187.2 126 69.8
BolC4t28493H Brassica oleracea HOM05D003750 ORTHO05D004337 2.0e-45 187.2 126 69.8
BraA04t18694Z Brassica rapa HOM05D003750 ORTHO05D004337 2.0e-45 187.2 126 69.8
Lj6g0002200 Lotus japonicus HOM05D003750 ORTHO05D004337 2.0e-45 187.2 115 75.7
AL4G41450 Arabidopsis lyrata HOM05D003750 ORTHO05D004337 2.6e-45 186.8 125 71.2
BcaB06g29267 Brassica carinata HOM05D003750 ORTHO05D004337 2.6e-45 186.8 313 55.9
Cfa022914 Carpinus fangiana HOM05D003750 ORTHO05D004337 5.7e-45 185.7 331 54.1
Nitab4.5_0001675g0060 Nicotiana tabacum HOM05D003750 ORTHO05D004337 5.7e-45 185.7 331 45.9
Phvul.008G190900 Phaseolus vulgaris HOM05D003750 ORTHO05D004337 5.7e-45 185.7 163 68.7
Glyma.18G106400 Glycine max HOM05D003750 ORTHO05D004337 7.5e-45 185.3 313 49.8
Lalb_Chr10g0106741 Lupinus albus HOM05D003750 ORTHO05D004337 7.5e-45 185.3 120 72.5
Glyma.14G027551 Glycine max HOM05D003750 ORTHO05D004337 1.3e-44 184.5 206 66.5
HanXRQChr06g0171371 Helianthus annuus HOM05D003750 ORTHO05D004337 2.8e-44 183.3 126 69.0
Glyma.08G309700 Glycine max HOM05D003750 ORTHO05D004337 4.9e-44 182.6 122 73.0
Lsat_1_v5_gn_3_35901 Lactuca sativa HOM05D003750 ORTHO05D004337 4.9e-44 182.6 350 46.9
VMungo0647G1422 Vigna mungo HOM05D003750 ORTHO05D004337 6.3e-44 182.2 122 71.3
ClCG02G018380 Citrullus lanatus HOM05D003750 ORTHO05D004337 1.8e-43 180.6 315 46.7
Ciclev10032169m.g Citrus clementina HOM05D003750 ORTHO05D004337 1.8e-43 180.6 125 71.2
PGR142G2515 Punica granatum HOM05D003750 ORTHO05D004337 1.8e-43 180.6 125 69.6
TPR.G12519 Trifolium pratense HOM05D003750 ORTHO05D004337 1.8e-43 180.6 122 68.9
MD09G1154000 Malus domestica HOM05D003750 ORTHO05D004337 2.4e-43 180.3 337 47.5
Nitab4.5_0013539g0020 Nicotiana tabacum HOM05D003750 ORTHO05D004337 4.1e-43 179.5 338 45.3
CsaV3_6G015810 Cucumis sativus L. HOM05D003750 ORTHO05D004337 7.0e-43 178.7 312 50.0
Prupe.3G171000 Prunus persica HOM05D003750 ORTHO05D004337 1.6e-42 177.6 335 44.8
Sed0024619 Sechium edule HOM05D003750 ORTHO05D004337 1.6e-42 177.6 125 65.6
CsaV3_6G038000 Cucumis sativus L. HOM05D003750 ORTHO05D004337 2.0e-42 177.2 113 70.8
MD17G1140600 Malus domestica HOM05D003750 ORTHO05D004337 2.0e-42 177.2 322 50.0
Aa31LG1G24600 Aethionema arabicum HOM05D003750 ORTHO05D004337 2.7e-42 176.8 120 69.2
MELO3C014462.2 Cucumis melo HOM05D003750 ORTHO05D004337 2.7e-42 176.8 121 66.1
Sabra02G0049300 Salix brachista HOM05D003750 ORTHO05D004337 2.7e-42 176.8 320 48.8
CAN.G585.54 Capsicum annuum HOM05D003750 ORTHO05D004337 3.5e-42 176.4 323 45.5
MELO3C019689.2 Cucumis melo HOM05D003750 ORTHO05D004337 4.5e-42 176.0 312 50.6
Duzib147G0801 Durio zibethinus HOM05D003750 ORTHO05D004337 4.5e-42 176.0 345 50.1
Ca_27365_v3 Cicer arietinum L. HOM05D003750 ORTHO05D004337 5.9e-42 175.6 126 68.3
Medtr3g089570 Medicago truncatula HOM05D003750 ORTHO05D004337 5.9e-42 175.6 115 69.6
Lalb_Chr20g0108881 Lupinus albus HOM05D003750 ORTHO05D004337 7.7e-42 175.3 305 54.1
Manes.01G128300 Manihot esculenta HOM05D003750 ORTHO05D004337 2.9e-41 173.3 118 69.5
Rhsim06G0118400 Rhododendron simsii HOM05D003750 ORTHO05D004337 2.9e-41 173.3 116 71.6
RcHm_v2.0_Chr2g0151161 Rosa chinensis HOM05D003750 ORTHO05D004337 3.8e-41 172.9 308 63.3
Sed0013297 Sechium edule HOM05D003750 ORTHO05D004337 6.6e-41 172.2 113 70.8
CSS0030446 Camellia sinensis var. sinensis HOM05D003750 ORTHO05D004337 1.1e-40 171.4 127 66.9
Lalb_Chr19g0137861 Lupinus albus HOM05D003750 ORTHO05D004337 1.1e-40 171.4 307 47.9
Nitab4.5_0006934g0020 Nicotiana tabacum HOM05D003750 ORTHO05D004337 1.1e-40 171.4 118 70.3
SGA_v2.0_scaffold70G23672 Striga asiatica HOM05D003750 ORTHO05D004337 1.5e-40 171.0 126 68.3
Peaxi162Scf00807g00024 Petunia axillaris HOM05D003750 ORTHO05D004337 1.9e-40 170.6 125 66.4
Sabra05G0152900 Salix brachista HOM05D003750 ORTHO05D004337 1.9e-40 170.6 315 57.8
PGSC0003DMG400017342 Solanum tuberosum HOM05D003750 ORTHO05D004337 3.3e-40 169.9 118 67.8
TAR626G1101 Trochodendron aralioides HOM05D003750 ORTHO05D004337 3.3e-40 169.9 320 50.6
Nitab4.5_0000446g0080 Nicotiana tabacum HOM05D003750 ORTHO05D004337 4.3e-40 169.5 118 69.5
Dinv12695 Davidia involucrata HOM05D003750 ORTHO05D004337 5.6e-40 169.1 114 71.9
FvH4_6g38100 Fragaria vesca HOM05D003750 ORTHO05D004337 9.5e-40 168.3 318 55.7
Sed0014259 Sechium edule HOM05D003750 ORTHO05D004337 9.5e-40 168.3 113 73.5
CAN.G1191.4 Capsicum annuum HOM05D003750 ORTHO05D004337 1.2e-39 167.9 111 71.2
Peaxi162Scf00688g00432 Petunia axillaris HOM05D003750 ORTHO05D004337 1.2e-39 167.9 333 46.8
PGSC0003DMG400021281 Solanum tuberosum HOM05D003750 ORTHO05D004337 2.1e-39 167.2 116 68.1
Sopen10g003700 Solanum pennellii HOM05D003750 ORTHO05D004337 4.7e-39 166.0 118 67.8
Actinidia11198 Actinidia chinensis HOM05D003750 ORTHO05D004337 6.1e-39 165.6 323 48.3
ECA246G0286 Erigeron canadensis HOM05D003750 ORTHO05D004337 6.1e-39 165.6 115 67.0
TAR624G1252 Trochodendron aralioides HOM05D002606 ORTHO05D003016 6.1e-39 165.6 132 62.9
Oeu040027.1 Olea europaea HOM05D003750 ORTHO05D004337 8.0e-39 165.2 323 55.1
Solyc10g007800.3 Solanum lycopersicum HOM05D003750 ORTHO05D004337 8.0e-39 165.2 118 67.8
vmacro12451 Vaccinium macrocarpon HOM05D003750 ORTHO05D004337 8.0e-39 165.2 310 47.1
CANSAT64G2056 Cannabis sativa HOM05D003750 ORTHO05D004337 1.8e-38 164.1 117 65.8
Solyc07g055950.3 Solanum lycopersicum HOM05D003750 ORTHO05D004337 1.8e-38 164.1 323 46.4
FAN02G2641 Fragaria x ananassa HOM05D003750 ORTHO05D004337 2.3e-38 163.7 119 69.7
Sopen07g029310 Solanum pennellii HOM05D003750 ORTHO05D004337 3.0e-38 163.3 323 46.1
MSTRG.15053 Avicennia marina HOM05D003750 ORTHO05D004337 4.0e-38 162.9 119 66.4
Cc05_g09310 Coffea canephora HOM05D003750 ORTHO05D004337 4.0e-38 162.9 307 51.8
Oeu020066.1 Olea europaea HOM05D003750 ORTHO05D004337 4.0e-38 162.9 118 67.8
arahy.Tifrunner.gnm1.ann1.ZP8MLZ Arachis hypogaea HOM05D003750 ORTHO05D004337 5.2e-38 162.5 122 64.8
FAN14G5523 Fragaria x ananassa HOM05D003750 ORTHO05D004337 6.8e-38 162.2 325 54.2
Migut.M00516 Erythranthe guttata HOM05D003750 ORTHO05D004337 8.9e-38 161.8 120 65.0
FAN05G3098 Fragaria x ananassa HOM05D003750 ORTHO05D004337 1.2e-37 161.4 327 54.4
Nn6g34390 Nelumbo nucifera HOM05D003750 ORTHO05D004337 2.6e-37 160.2 126 62.7
arahy.Tifrunner.gnm1.ann1.N94NTJ Arachis hypogaea HOM05D003750 ORTHO05D004337 4.4e-37 159.5 108 67.6
CAN.G164.22 Capsicum annuum HOM05D003750 ORTHO05D004337 4.4e-37 159.5 152 63.8
Nitab4.5_0001402g0030 Nicotiana tabacum HOM05D003750 ORTHO05D004337 7.5e-37 158.7 123 64.2
Nitab4.5_0002027g0180 Nicotiana tabacum HOM05D003750 ORTHO05D004337 9.8e-37 158.3 123 63.4
Peaxi162Scf00035g00302 Petunia axillaris HOM05D003750 ORTHO05D004337 2.9e-36 156.8 111 67.6
unitig_747.g21612 Utricularia gibba HOM05D003750 ORTHO05D004337 1.4e-35 154.5 121 58.7
TPR.G16759 Trifolium pratense HOM05D003750 ORTHO05D004337 1.8e-35 154.1 107 69.2
PGSC0003DMG400007796 Solanum tuberosum HOM05D003750 ORTHO05D004337 2.4e-35 153.7 111 64.9
MSTRG.6755 Avicennia marina HOM05D003750 ORTHO05D004337 4.1e-35 152.9 124 62.1
Solyc12g011010.2 Solanum lycopersicum HOM05D003750 ORTHO05D004337 7.0e-35 152.1 111 65.8
Lsat_1_v5_gn_4_26620 Lactuca sativa HOM05D003750 ORTHO05D004337 9.2e-35 151.8 131 58.0
SalBow7G1469 Salvia bowleyana HOM05D003750 ORTHO05D004337 1.2e-34 151.4 118 61.0
unitig_37.g12854 Utricularia gibba HOM05D003750 ORTHO05D004337 2.0e-34 150.6 116 59.5
unitig_899.g15337 Utricularia gibba HOM05D003750 ORTHO05D004337 4.6e-34 149.4 122 57.4
unitig_62.g23108 Utricularia gibba HOM05D003750 ORTHO05D004337 7.8e-34 148.7 118 55.9
unitig_46.g18277 Utricularia gibba HOM05D003750 ORTHO05D004337 1.0e-33 148.3 120 55.0
SalBow7G0202 Salvia bowleyana HOM05D003750 ORTHO05D004337 1.3e-33 147.9 130 56.9
Sopen12g006370 Solanum pennellii HOM05D003750 ORTHO05D004337 1.3e-33 147.9 112 66.1
Aqoxy4G00176 Aquilegia oxysepala HOM05D003750 ORTHO05D004337 1.7e-33 147.5 120 64.2
Migut.H02092 Erythranthe guttata HOM05D003750 ORTHO05D004337 2.3e-33 147.1 112 61.6
Nn3g20965 Nelumbo nucifera HOM05D003750 ORTHO05D004337 1.1e-32 144.8 126 57.1
DCAR_021309 Daucus carota HOM05D003750 ORTHO05D004337 3.3e-32 143.3 130 60.8
DCAR_009794 Daucus carota HOM05D003750 ORTHO05D004337 4.3e-32 142.9 127 61.4
MBI07_g30204_MAGBIO Magnolia biondii HOM05D003750 ORTHO05D004337 4.3e-32 142.9 123 61.0
Ca_06287_v3 Cicer arietinum L. HOM05D003750 ORTHO05D004337 2.1e-31 140.6 96 74.0
Eucgr.A01963 Eucalyptus grandis HOM05D003750 ORTHO05D004337 2.1e-31 140.6 128 60.2
MBI06_g20684_MAGBIO Magnolia biondii HOM05D003750 ORTHO05D004337 1.4e-30 137.9 125 56.8
unitig_85.g27387 Utricularia gibba HOM05D003750 ORTHO05D004337 3.1e-30 136.7 117 55.6
Glyma.02G280550 Glycine max HOM05D003750 ORTHO05D004337 4.0e-30 136.3 115 60.9
AUR62015148 Chenopodium quinoa HOM05D003750 ORTHO05D004337 1.5e-29 134.4 109 55.0
PSO675G0845 Papaver somniferum HOM05D003750 ORTHO05D004337 2.6e-29 133.7 124 55.6
CDE09G1130 Ceratophyllum demersum HOM05D003750 ORTHO05D004337 3.4e-29 133.3 118 56.8
HanXRQChr17g0565481 Helianthus annuus HOM05D003750 ORTHO05D004337 3.4e-29 133.3 113 59.3
ATR0737G120 Amborella trichopoda HOM05D003750 ORTHO05D004337 9.8e-29 131.7 120 55.8
HanXRQChr17g0565411 Helianthus annuus HOM05D003750 ORTHO05D004337 9.8e-29 131.7 114 58.8
Zm00001eb154370 Zea mays HOM05D003750 ORTHO05D004337 9.8e-29 131.7 115 57.4
HanXRQChr17g0565191 Helianthus annuus HOM05D003750 ORTHO05D004337 1.3e-28 131.3 114 58.8
HanXRQChr17g0565441 Helianthus annuus HOM05D003750 ORTHO05D004337 1.3e-28 131.3 114 58.8
HanXRQChr17g0565471 Helianthus annuus HOM05D003750 ORTHO05D004337 1.3e-28 131.3 114 58.8
PSO541G0678 Papaver somniferum HOM05D003750 ORTHO05D004337 1.3e-28 131.3 124 54.8
DCAR_016898 Daucus carota HOM05D003750 ORTHO05D004337 2.2e-28 130.6 121 57.9
Os01g0726700 Oryza sativa ssp. japonica HOM05D003750 ORTHO05D004337 2.9e-28 130.2 155 45.8
Sc15g0002430 Simmondsia chinensis HOM05D003750 ORTHO05D004337 3.7e-28 129.8 124 54.0
CDE02G2915 Ceratophyllum demersum HOM05D003750 ORTHO05D004337 4.1e-27 126.3 114 55.3
EL10Ac9g22858 Beta vulgaris HOM05D003750 ORTHO05D004337 5.4e-27 125.9 107 54.2
HPP92_009096 Vanilla planifolia HOM05D003750 ORTHO05D004337 1.6e-26 124.4 109 56.0
Ah.01g013400 Amaranthus hybridus HOM05D003750 ORTHO05D004337 2.0e-26 124.0 108 51.9
Ah.01g001950 Amaranthus hybridus HOM05D003750 ORTHO05D004337 3.5e-26 123.2 115 51.3
Hund08216 Selenicereus undatus HOM05D003750 ORTHO05D004337 6.0e-26 122.5 127 50.4
HanXRQChr01g0028591 Helianthus annuus HOM05D003750 ORTHO05D004337 2.3e-25 120.6 113 54.9
ECA234G0795 Erigeron canadensis HOM05D001021 ORTHO05D000894 1.4e-22 111.3 106 52.8
AUR62017604 Chenopodium quinoa HOM05D003750 ORTHO05D004337 3.1e-22 110.2 90 51.1
Zm00001eb239390 Zea mays HOM05D003750 ORTHO05D004337 8.9e-22 108.6 115 48.7
SEGI_25228 Sequoiadendron giganteum HOM05D003750 ORTHO05D004337 4.6e-18 96.3 110 49.1
Zm00001eb278420 Zea mays HOM05D003750 ORTHO05D004337 1.5e-16 91.3 131 40.5
Zm00001eb384740 Zea mays HOM05D003750 ORTHO05D004337 3.1e-14 83.6 107 43.0
Os02g0230300 Oryza sativa ssp. japonica HOM05D003750 ORTHO05D004337 2.0e-13 80.9 69 58.0
Zm00001eb120700 Zea mays HOM05D003750 ORTHO05D004337 9.9e-13 78.6 119 42.0
TPR.G40574 Trifolium pratense HOM05D003750 ORTHO05D004337 1.3e-12 78.2 44 68.2
Pp3c4_16960 Physcomitrium patens HOM05D003750 ORTHO05D004337 6.4e-12 75.9 117 37.6
Zm00001eb277660 Zea mays HOM05D003750 ORTHO05D004337 8.4e-12 75.5 110 41.8
Os06g0553200 Oryza sativa ssp. japonica HOM05D003750 ORTHO05D004337 3.2e-11 73.6 119 37.0
SEGI_36288 Sequoiadendron giganteum HOM05D007363 ORTHO05D009018 4.6e-10 69.7 113 37.2
AagrBONN_evm.TU.Sc2ySwM_228.4867 Anthoceros agrestis HOM05D003750 ORTHO05D004337 7.8e-10 68.9 108 38.0
SEGI_24140 Sequoiadendron giganteum HOM05D007363 ORTHO05D009018 6.6e-09 65.9 116 33.6
Pp3c11_23110 Physcomitrium patens HOM05D003750 ORTHO05D004337 5.6e-08 62.8 114 33.3
SEGI_29869 Sequoiadendron giganteum HOM05D007363 ORTHO05D009018 6.8e-06 55.8 87 35.6
Mapoly0090s0021 Marchantia polymorpha HOM05D021038 ORTHO05D009018 8.9e-06 55.5 117 35.9


User provided reference genes

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