Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc50.57 Carica papaya HOM05D007438 ORTHO05D009395 2.4e-164 582.0 284 100.0
COL.COLO4_33655 Corchorus olitorius HOM05D007438 ORTHO05D009395 4.3e-68 262.3 289 51.9
Thecc.01G156400 Theobroma cacao HOM05D007438 ORTHO05D009395 4.3e-68 262.3 284 53.9
Duzib264G0748 Durio zibethinus HOM05D007438 ORTHO05D009395 9.9e-65 251.1 288 50.3
GSVIVG01020783001 Vitis vinifera HOM05D007438 ORTHO05D009395 2.1e-62 243.4 287 48.1
Potri.014G141500 Populus trichocarpa HOM05D007438 ORTHO05D009395 3.0e-61 239.6 297 49.2
Gorai.006G004700 Gossypium raimondii HOM05D007438 ORTHO05D009395 2.5e-60 236.5 288 48.3
Cfa021395 Carpinus fangiana HOM05D007438 ORTHO05D009395 4.3e-60 235.7 302 47.7
Gohir.D09G003400 Gossypium hirsutum HOM05D007438 ORTHO05D009395 4.3e-60 235.7 289 47.4
Gohir.A09G003800 Gossypium hirsutum HOM05D007438 ORTHO05D009395 1.3e-59 234.2 288 48.3
Dinv11426 Davidia involucrata HOM05D007438 ORTHO05D009395 1.4e-58 230.7 262 50.4
vmacro09194 Vaccinium macrocarpon HOM05D007438 ORTHO05D009395 1.8e-58 230.3 289 47.4
TAR629G3405 Trochodendron aralioides HOM05D007438 ORTHO05D009395 5.3e-58 228.8 287 47.0
Ciclev10016256m.g Citrus clementina HOM05D007438 ORTHO05D009395 1.5e-57 227.3 298 46.6
Sabra14G0106800 Salix brachista HOM05D007438 ORTHO05D009395 7.6e-57 224.9 294 45.9
CSS0044063 Camellia sinensis var. sinensis HOM05D007438 ORTHO05D009395 1.4e-55 220.7 295 43.7
Medtr5g091960 Medicago truncatula HOM05D007438 ORTHO05D009395 3.2e-55 219.5 288 45.8
CiPaw.03G193300 Carya illinoinensis HOM05D007438 ORTHO05D009395 7.1e-55 218.4 326 42.3
Manes.01G129800 Manihot esculenta HOM05D007438 ORTHO05D009395 6.0e-54 215.3 288 45.5
CSS0040852 Camellia sinensis var. sinensis HOM05D007438 ORTHO05D009395 1.0e-53 214.5 295 42.7
Glyma.02G288700 Glycine max HOM05D007438 ORTHO05D009395 1.7e-53 213.8 288 45.5
Glyma.14G026100 Glycine max HOM05D007438 ORTHO05D009395 2.3e-53 213.4 290 45.5
Eucgr.A01949 Eucalyptus grandis HOM05D007438 ORTHO05D009395 3.9e-53 212.6 283 44.2
Atru.chr6.3569 Acer truncatum HOM05D007438 ORTHO05D009395 5.1e-53 212.2 302 44.0
Rhsim04G0081300 Rhododendron simsii HOM05D007438 ORTHO05D009395 5.1e-53 212.2 296 43.9
Peaxi162Scf00154g01024 Petunia axillaris HOM05D007438 ORTHO05D009395 2.5e-52 209.9 289 45.3
QL08p043052 Quercus lobata HOM05D007438 ORTHO05D009395 2.5e-52 209.9 334 42.2
Actinidia30518 Actinidia chinensis HOM05D007438 ORTHO05D009395 4.3e-52 209.1 296 42.9
CAN.G803.12 Capsicum annuum HOM05D007438 ORTHO05D009395 4.3e-52 209.1 287 44.6
PGSC0003DMG401017288 Solanum tuberosum HOM05D007438 ORTHO05D009395 7.4e-52 208.4 289 45.0
Prupe.3G108500 Prunus persica HOM05D007438 ORTHO05D009395 1.3e-51 207.6 200 54.0
Nn3g21054 Nelumbo nucifera HOM05D007438 ORTHO05D009395 1.6e-51 207.2 294 41.5
Ca_06297_v3 Cicer arietinum L. HOM05D007438 ORTHO05D009395 2.8e-51 206.5 289 43.9
PGR042G1218 Punica granatum HOM05D007438 ORTHO05D009395 6.2e-51 205.3 293 44.4
TPR.G12671 Trifolium pratense HOM05D007438 ORTHO05D009395 4.0e-50 202.6 295 43.1
MSTRG.6772 Avicennia marina HOM05D007438 ORTHO05D009395 2.0e-49 200.3 290 42.4
arahy.Tifrunner.gnm1.ann1.2XI8FI Arachis hypogaea HOM05D007438 ORTHO05D009395 1.7e-48 197.2 301 42.2
arahy.Tifrunner.gnm1.ann1.9R49YU Arachis hypogaea HOM05D007438 ORTHO05D009395 1.7e-48 197.2 301 42.2
MBI06_g16570_MAGBIO Magnolia biondii HOM05D007438 ORTHO05D009395 1.7e-48 197.2 293 41.0
Lalb_Chr10g0106871 Lupinus albus HOM05D007438 ORTHO05D009395 2.2e-48 196.8 287 43.9
VMungo1215G1664 Vigna mungo HOM05D007438 ORTHO05D009395 2.2e-48 196.8 274 44.2
LjContig00310g0012276 Lotus japonicus HOM05D007438 ORTHO05D009395 3.8e-48 196.1 286 44.8
Cc05_g09010 Coffea canephora HOM05D007438 ORTHO05D009395 6.4e-48 195.3 294 39.8
Sopen07g029090 Solanum pennellii HOM05D007438 ORTHO05D009395 8.4e-48 194.9 290 42.8
ClCG09G022220 Citrullus lanatus HOM05D007438 ORTHO05D009395 2.1e-46 190.3 216 49.5
Aqoxy1G01934 Aquilegia oxysepala HOM05D007438 ORTHO05D009395 6.0e-46 188.7 292 40.1
Sed0004780 Sechium edule HOM05D007438 ORTHO05D009395 6.0e-46 188.7 284 42.6
Solyc07g055720.4 Solanum lycopersicum HOM05D007438 ORTHO05D009395 7.9e-46 188.3 288 41.3
Lj3C1012T3 Lonicera japonica HOM05D007438 ORTHO05D009395 1.0e-45 188.0 303 39.6
MELO3C014451.2 Cucumis melo HOM05D007438 ORTHO05D009395 1.3e-45 187.6 217 50.7
CSS0035465 Camellia sinensis var. sinensis HOM05D007438 ORTHO05D009395 1.9e-44 183.7 323 38.4
CANSAT64G1631 Cannabis sativa HOM05D007438 ORTHO05D009395 3.3e-44 183.0 329 39.5
Nitab4.5_0003133g0060 Nicotiana tabacum HOM05D007438 ORTHO05D009395 4.3e-44 182.6 286 39.9
TWI74G0447 Tripterygium wilfordii HOM05D007438 ORTHO05D009395 5.6e-44 182.2 289 41.5
DCAR_013288 Daucus carota HOM05D007438 ORTHO05D009395 9.6e-44 181.4 295 39.0
Psat2g015640 Pisum sativum HOM05D007438 ORTHO05D009395 1.6e-43 180.6 291 43.0
CsaV3_6G037900 Cucumis sativus L. HOM05D007438 ORTHO05D009395 3.7e-43 179.5 216 48.1
AUR62031789 Chenopodium quinoa HOM05D007438 ORTHO05D009395 4.8e-43 179.1 293 38.2
arahy.Tifrunner.gnm1.ann1.K6S8U8 Arachis hypogaea HOM05D007438 ORTHO05D009395 1.3e-40 171.0 301 39.2
AUR62023994 Chenopodium quinoa HOM05D007438 ORTHO05D009395 3.8e-40 169.5 294 37.1
EL10Ac9g21031 Beta vulgaris HOM05D007438 ORTHO05D009395 1.1e-39 167.9 304 35.5
Nitab4.5_0005259g0040 Nicotiana tabacum HOM05D007438 ORTHO05D009395 2.5e-39 166.8 225 43.6
SalBow7G1752 Salvia bowleyana HOM05D007438 ORTHO05D009395 7.1e-39 165.2 285 38.6
Hund07732 Selenicereus undatus HOM05D007438 ORTHO05D009395 2.3e-37 160.2 304 35.2
AT1G06460 Arabidopsis thaliana HOM05D007438 ORTHO05D009395 3.9e-37 159.5 312 35.9
AL1G16470 Arabidopsis lyrata HOM05D007438 ORTHO05D009395 6.7e-37 158.7 320 35.0
Sp1g05220 Schrenkiella parvula HOM05D007438 ORTHO05D009395 6.7e-37 158.7 341 33.7
Phvul.008G264700 Phaseolus vulgaris HOM05D007438 ORTHO05D009395 1.5e-36 157.5 288 38.2
BraA08t35504Z Brassica rapa HOM05D007438 ORTHO05D009395 4.3e-36 156.0 328 34.8
CARHR006070 Cardamine hirsuta HOM05D007438 ORTHO05D009395 2.1e-35 153.7 314 34.4
Migut.M00210 Erythranthe guttata HOM05D007438 ORTHO05D009395 2.1e-35 153.7 286 39.2
Aa31LG1G7510 Aethionema arabicum HOM05D007438 ORTHO05D009395 3.7e-35 152.9 304 34.5
Carub.0001s0582 Capsella rubella HOM05D007438 ORTHO05D009395 8.2e-35 151.8 326 35.6
THA.LOC104800831 Tarenaya hassleriana HOM05D007438 ORTHO05D009395 1.1e-34 151.4 289 36.0
ATR0127G021 Amborella trichopoda HOM05D007438 ORTHO05D009395 1.8e-34 150.6 223 39.5
BraA10t42777Z Brassica rapa HOM05D007438 ORTHO05D009395 1.8e-34 150.6 338 32.5
A10p05120 Brassica napus HOM05D007438 ORTHO05D009395 2.4e-34 150.2 331 33.5
ECA234G1517 Erigeron canadensis HOM05D007438 ORTHO05D009395 2.4e-34 150.2 288 35.8
TAR626G1821 Trochodendron aralioides HOM05D007438 ORTHO05D009395 2.4e-34 150.2 237 38.8
BcaB02g06796 Brassica carinata HOM05D007438 ORTHO05D009395 3.1e-34 149.8 327 33.3
BolC8t47053H Brassica oleracea HOM05D007438 ORTHO05D009395 6.9e-34 148.7 254 39.8
Lsat_1_v5_gn_4_26780 Lactuca sativa HOM05D007438 ORTHO05D009395 2.0e-33 147.1 289 35.6
SEGI_11984 Sequoiadendron giganteum HOM05D007438 ORTHO05D009395 2.6e-33 146.7 232 36.6
C08p02600 Brassica napus HOM05D007438 ORTHO05D009395 1.3e-32 144.4 244 38.9
C05p04710 Brassica napus HOM05D007438 ORTHO05D009395 1.7e-32 144.1 330 33.0
BolC5t29243H Brassica oleracea HOM05D007438 ORTHO05D009395 2.9e-32 143.3 343 32.7
Nitab4.5_0011473g0010 Nicotiana tabacum HOM05D007438 ORTHO05D009395 1.2e-30 137.9 179 41.9
Thhalv10008353m.g Eutrema salsugineum HOM05D007438 ORTHO05D009395 1.0e-29 134.8 226 39.8
HanXRQChr01g0028661 Helianthus annuus HOM05D007438 ORTHO05D009395 1.0e-29 134.8 291 34.0
arahy.Tifrunner.gnm1.ann1.AN6F3M Arachis hypogaea HOM05D007438 ORTHO05D009395 1.3e-29 134.4 195 43.6
HPP92_021771 Vanilla planifolia HOM05D007438 ORTHO05D009395 1.1e-28 131.3 216 39.4
A08p35960 Brassica napus HOM05D007438 ORTHO05D009395 1.9e-28 130.6 284 33.1
BcaB03g13417 Brassica carinata HOM05D000181 ORTHO05D002783 3.3e-28 129.8 318 33.3
Sc21g0004330 Simmondsia chinensis HOM05D007438 ORTHO05D009395 6.9e-26 122.1 94 60.6
Mapoly0109s0048 Marchantia polymorpha HOM05D007438 ORTHO05D009395 3.3e-20 103.2 253 33.6
SMO111G0151 Selaginella moellendorffii HOM05D007438 ORTHO05D009395 2.8e-19 100.1 227 32.2
arahy.Tifrunner.gnm1.ann1.28WURV Arachis hypogaea HOM05D007438 ORTHO05D009395 8.2e-19 98.6 76 61.8
BcaC07g36810 Brassica carinata HOM05D000181 ORTHO05D002783 8.2e-19 98.6 181 39.8
Sc21g0004320 Simmondsia chinensis HOM05D007438 ORTHO05D009395 1.1e-18 98.2 204 35.8
Haze_13451 Corylus avellana HOM05D007438 ORTHO05D009395 1.6e-14 84.3 127 43.3
Pp3c2_23860 Physcomitrium patens HOM05D007438 ORTHO05D009395 1.8e-10 70.9 209 31.1
Phvul.003G195300 Phaseolus vulgaris HOM05D007438 ORTHO05D009395 5.3e-10 69.3 192 32.8
Lj2g0002550 Lotus japonicus HOM05D007438 ORTHO05D009395 3.8e-08 63.2 57 50.9
SalBow8G2019 Salvia bowleyana HOM05D007438 ORTHO05D009395 1.1e-07 61.6 185 31.4
HanXRQChr17g0565881 Helianthus annuus HOM05D007438 ORTHO05D009395 5.5e-07 59.3 175 31.4


User provided reference genes

Program Settings