Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc50.20 Carica papaya HOM05D005758 ORTHO05D007218 2.6e-118 428.7 211 100.0
QL09p038696 Quercus lobata HOM05D005758 ORTHO05D007218 2.7e-75 285.8 198 71.7
COL.COLO4_05896 Corchorus olitorius HOM05D005758 ORTHO05D007218 4.6e-75 285.0 199 70.4
QL09p049090 Quercus lobata HOM05D005758 ORTHO05D007218 1.3e-74 283.5 198 70.7
Duzib133G0949 Durio zibethinus HOM05D005758 ORTHO05D007218 3.0e-74 282.3 199 70.4
Thecc.01G258700 Theobroma cacao HOM05D005758 ORTHO05D007218 3.0e-74 282.3 199 69.3
Gohir.D07G219100 Gossypium hirsutum HOM05D005758 ORTHO05D007218 5.1e-74 281.6 199 68.3
CSS0001414 Camellia sinensis var. sinensis HOM05D005758 ORTHO05D007218 1.1e-73 280.4 199 68.3
Haze_24627 Corylus avellana HOM05D005758 ORTHO05D007218 1.1e-73 280.4 199 70.4
vmacro02660 Vaccinium macrocarpon HOM05D005758 ORTHO05D007218 1.1e-73 280.4 199 69.8
Cfa002421 Carpinus fangiana HOM05D005758 ORTHO05D007218 1.5e-73 280.0 199 70.9
Ciclev10023734m.g Citrus clementina HOM05D005758 ORTHO05D007218 1.9e-73 279.6 199 67.8
Gorai.001G253600 Gossypium raimondii HOM05D005758 ORTHO05D007218 1.9e-73 279.6 199 67.8
FAN15G0777 Fragaria x ananassa HOM05D005758 ORTHO05D007218 2.5e-73 279.3 199 69.3
FvH4_2g21510 Fragaria vesca HOM05D005758 ORTHO05D007218 4.3e-73 278.5 199 69.3
FAN24G1897 Fragaria x ananassa HOM05D005758 ORTHO05D007218 4.3e-73 278.5 199 69.3
RcHm_v2.0_Chr6g0288161 Rosa chinensis HOM05D005758 ORTHO05D007218 4.3e-73 278.5 199 69.3
FAN27G1683 Fragaria x ananassa HOM05D005758 ORTHO05D007218 5.6e-73 278.1 199 69.3
Gohir.A07G213000 Gossypium hirsutum HOM05D005758 ORTHO05D007218 7.3e-73 277.7 199 67.8
Solyc05g026140.4 Solanum lycopersicum HOM05D005758 ORTHO05D007218 2.1e-72 276.2 199 68.3
GSVIVG01028326001 Vitis vinifera HOM05D005758 ORTHO05D007218 2.1e-72 276.2 199 66.8
Sopen05g022350 Solanum pennellii HOM05D005758 ORTHO05D007218 2.8e-72 275.8 199 68.8
Prupe.8G224000 Prunus persica HOM05D005758 ORTHO05D007218 8.1e-72 274.2 198 69.2
Peaxi162Scf00854g00219 Petunia axillaris HOM05D005758 ORTHO05D007218 1.4e-71 273.5 197 68.0
CANSAT35G0929 Cannabis sativa HOM05D005758 ORTHO05D007218 1.8e-71 273.1 197 67.5
Lj1A66G58 Lonicera japonica HOM05D005758 ORTHO05D007218 1.8e-71 273.1 199 67.3
Duzib138G0621 Durio zibethinus HOM05D005758 ORTHO05D007218 3.1e-71 272.3 203 67.5
MD05G1197700 Malus domestica HOM05D005758 ORTHO05D007218 3.1e-71 272.3 198 67.7
Manes.12G032100 Manihot esculenta HOM05D005758 ORTHO05D007218 3.1e-71 272.3 199 68.8
Potri.005G224000 Populus trichocarpa HOM05D005758 ORTHO05D007218 4.0e-71 271.9 198 68.7
Atru.chr5.1673 Acer truncatum HOM05D005758 ORTHO05D007218 5.3e-71 271.6 199 68.3
Cc04_g14920 Coffea canephora HOM05D005758 ORTHO05D007218 5.3e-71 271.6 199 69.3
TWI12G1280 Tripterygium wilfordii HOM05D005758 ORTHO05D007218 5.3e-71 271.6 200 69.0
Nitab4.5_0001587g0020 Nicotiana tabacum HOM05D005758 ORTHO05D007218 6.9e-71 271.2 198 66.7
ClCG09G007800 Citrullus lanatus HOM05D005758 ORTHO05D007218 9.0e-71 270.8 199 65.3
Rhsim13G0034500 Rhododendron simsii HOM05D005758 ORTHO05D007218 9.0e-71 270.8 199 67.3
Sabra05G0172800 Salix brachista HOM05D005758 ORTHO05D007218 9.0e-71 270.8 199 67.8
TAR636G1025 Trochodendron aralioides HOM05D005758 ORTHO05D007218 1.5e-70 270.0 199 66.3
CAN.G184.8 Capsicum annuum HOM05D005758 ORTHO05D007218 5.8e-70 268.1 199 67.3
MELO3C015730.2 Cucumis melo HOM05D005758 ORTHO05D007218 7.6e-70 267.7 199 64.3
Sp4g13680 Schrenkiella parvula HOM05D005758 ORTHO05D007218 1.3e-69 266.9 199 65.8
Carub.0004s1247 Capsella rubella HOM05D005758 ORTHO05D007218 2.2e-69 266.2 199 64.3
MD10G1184300 Malus domestica HOM05D005758 ORTHO05D007218 2.9e-69 265.8 198 66.2
CsaV3_7G027330 Cucumis sativus L. HOM05D005758 ORTHO05D007218 4.9e-69 265.0 199 63.3
Sed0010920 Sechium edule HOM05D005758 ORTHO05D007218 1.1e-68 263.8 199 64.3
Thhalv10016683m.g Eutrema salsugineum HOM05D005758 ORTHO05D007218 1.4e-68 263.5 200 65.5
Aqoxy2G03640 Aquilegia oxysepala HOM05D005758 ORTHO05D007218 1.9e-68 263.1 198 63.6
AT2G31190 Arabidopsis thaliana HOM05D005758 ORTHO05D007218 1.9e-68 263.1 199 63.8
BcaB06g28429 Brassica carinata HOM05D005758 ORTHO05D007218 3.2e-68 262.3 199 64.3
BcaB06g28512 Brassica carinata HOM05D005758 ORTHO05D007218 7.1e-68 261.2 199 63.3
Aa31LG5G5730 Aethionema arabicum HOM05D005758 ORTHO05D007218 2.1e-67 259.6 198 62.1
Eucgr.B01556 Eucalyptus grandis HOM05D005758 ORTHO05D007218 2.1e-67 259.6 199 63.8
Actinidia27691 Actinidia chinensis HOM05D005758 ORTHO05D007218 2.7e-67 259.2 199 65.3
A04p24020 Brassica napus HOM05D005758 ORTHO05D007218 2.7e-67 259.2 199 63.3
CARHR124790 Cardamine hirsuta HOM05D005758 ORTHO05D007218 3.5e-67 258.8 199 63.3
C04p60690 Brassica napus HOM05D005758 ORTHO05D007218 4.6e-67 258.5 199 62.8
BolC4t27558H Brassica oleracea HOM05D005758 ORTHO05D007218 4.6e-67 258.5 199 62.8
DCAR_012547 Daucus carota HOM05D005758 ORTHO05D007218 6.0e-67 258.1 199 63.8
THA.LOC104800871 Tarenaya hassleriana HOM05D005758 ORTHO05D007218 1.0e-66 257.3 201 63.7
MSTRG.21495 Avicennia marina HOM05D005758 ORTHO05D007218 2.3e-66 256.1 197 65.0
BraA04t17923Z Brassica rapa HOM05D005758 ORTHO05D007218 8.7e-66 254.2 199 62.8
MBI07_g30496_MAGBIO Magnolia biondii HOM05D005758 ORTHO05D007218 1.5e-65 253.4 200 64.0
EL10Ac5g10402 Beta vulgaris HOM05D005758 ORTHO05D007218 3.3e-65 252.3 199 62.3
Lalb_Chr02g0152411 Lupinus albus HOM05D005758 ORTHO05D007218 4.3e-65 251.9 197 64.5
Nn3g19650 Nelumbo nucifera HOM05D005758 ORTHO05D007218 9.6e-65 250.8 197 64.0
Nitab4.5_0000206g0090 Nicotiana tabacum HOM05D005758 ORTHO05D007218 1.6e-64 250.0 185 66.5
SalBow4G2933 Salvia bowleyana HOM05D005758 ORTHO05D007218 4.8e-64 248.4 199 61.8
SGA_v2.0_scaffold1G00616 Striga asiatica HOM05D005758 ORTHO05D007218 8.1e-64 247.7 197 63.5
Lj5g0021558 Lotus japonicus HOM05D005758 ORTHO05D007218 1.1e-63 247.3 197 63.5
Migut.D00424 Erythranthe guttata HOM05D005758 ORTHO05D007218 2.4e-63 246.1 197 61.4
Ah.11g049730 Amaranthus hybridus HOM05D005758 ORTHO05D007218 4.0e-63 245.4 196 61.2
MBI10_g29590_MAGBIO Magnolia biondii HOM05D005758 ORTHO05D007218 5.3e-63 245.0 200 61.5
arahy.Tifrunner.gnm1.ann1.6W8MXB Arachis hypogaea HOM05D005758 ORTHO05D007218 9.0e-63 244.2 199 63.3
ECA236G3842 Erigeron canadensis HOM05D005758 ORTHO05D007218 1.2e-62 243.8 199 60.8
Phvul.007G193000 Phaseolus vulgaris HOM05D005758 ORTHO05D007218 3.4e-62 242.3 197 62.4
Glyma.13G123400 Glycine max HOM05D005758 ORTHO05D007218 9.9e-62 240.7 197 62.4
AUR62024718 Chenopodium quinoa HOM05D005758 ORTHO05D007218 1.7e-61 240.0 197 60.4
HanXRQChr04g0112661 Helianthus annuus HOM05D005758 ORTHO05D007218 2.9e-61 239.2 199 61.8
Medtr7g096920 Medicago truncatula HOM05D005758 ORTHO05D007218 3.8e-61 238.8 199 61.3
Lj1g0005369 Lotus japonicus HOM05D005758 ORTHO05D007218 4.9e-61 238.4 199 61.3
PGR004G1596 Punica granatum HOM05D005758 ORTHO05D007218 4.9e-61 238.4 199 58.8
VMungo0720G1063 Vigna mungo HOM05D005758 ORTHO05D007218 6.4e-61 238.0 197 61.9
Psat3g057680 Pisum sativum HOM05D005758 ORTHO05D007218 1.1e-60 237.3 199 60.8
Hund09599 Selenicereus undatus HOM05D005758 ORTHO05D007218 1.9e-60 236.5 197 59.4
PSO017G5675 Papaver somniferum HOM05D005758 ORTHO05D007218 3.2e-60 235.7 200 59.0
TPR.G28632 Trifolium pratense HOM05D005758 ORTHO05D007218 4.2e-60 235.3 199 59.8
Ca_08672_v3 Cicer arietinum L. HOM05D005758 ORTHO05D007218 1.8e-58 229.9 199 59.8
Glyma.03G163000 Glycine max HOM05D005758 ORTHO05D007218 1.8e-58 229.9 200 60.5
Glyma.19G164500 Glycine max HOM05D005758 ORTHO05D007218 1.8e-58 229.9 200 60.0
PSO063G6478 Papaver somniferum HOM05D005758 ORTHO05D007218 1.8e-58 229.9 198 58.1
VMungo1383G3618 Vigna mungo HOM05D005758 ORTHO05D007218 3.9e-58 228.8 198 59.6
Phvul.001G160800 Phaseolus vulgaris HOM05D005758 ORTHO05D007218 5.1e-58 228.4 198 59.6
Lsat_1_v5_gn_8_93000 Lactuca sativa HOM05D005758 ORTHO05D007218 1.6e-56 223.4 199 56.8
Sc24g0003150 Simmondsia chinensis HOM05D005758 ORTHO05D007218 1.6e-56 223.4 190 57.4
ECA248G1569 Erigeron canadensis HOM05D005758 ORTHO05D007218 2.1e-56 223.0 199 56.8
Lsat_1_v5_gn_5_183400 Lactuca sativa HOM05D005758 ORTHO05D007218 2.1e-56 223.0 200 56.0
ATR0736G118 Amborella trichopoda HOM05D005758 ORTHO05D007218 4.8e-56 221.9 200 54.5
HanXRQChr09g0254391 Helianthus annuus HOM05D005758 ORTHO05D007218 1.1e-55 220.7 199 57.3
unitig_8.g3733 Utricularia gibba HOM05D005758 ORTHO05D007218 1.1e-55 220.7 197 58.4
SHI09784 Sapria himalayana HOM05D000105 ORTHO05D007218 7.6e-54 214.5 198 57.1
Lsat_1_v5_gn_5_183361 Lactuca sativa HOM05D005758 ORTHO05D007218 1.9e-52 209.9 195 54.4
TAR365G0290 Trochodendron aralioides HOM05D005758 ORTHO05D007218 7.1e-52 208.0 166 64.5
Os04g0517300 Oryza sativa ssp. japonica HOM05D005758 ORTHO05D007218 9.3e-52 207.6 198 50.0
CiPaw.13G172300 Carya illinoinensis HOM05D005758 ORTHO05D007218 2.7e-51 206.1 150 70.0
CDE03G0270 Ceratophyllum demersum HOM05D005758 ORTHO05D007218 4.6e-51 205.3 201 53.7
SEGI_08575 Sequoiadendron giganteum HOM05D005758 ORTHO05D007218 6.0e-51 204.9 211 52.6
HPP92_026239 Vanilla planifolia HOM05D005758 ORTHO05D007218 1.1e-49 200.7 196 52.0
Zm00001eb077710 Zea mays HOM05D005758 ORTHO05D007218 1.9e-49 199.9 199 50.8
AUR62011874 Chenopodium quinoa HOM05D005758 ORTHO05D007218 3.3e-49 199.1 180 57.2
arahy.Tifrunner.gnm1.ann1.N9I7Q3 Arachis hypogaea HOM05D005758 ORTHO05D007218 3.4e-46 189.1 199 54.3
Mapoly0015s0205 Marchantia polymorpha HOM05D005758 ORTHO05D007218 7.4e-41 171.4 214 44.4
AagrBONN_evm.TU.Sc2ySwM_344.1590 Anthoceros agrestis HOM05D006894 ORTHO05D007218 9.7e-41 171.0 204 47.1
Pp3c16_18490 Physcomitrium patens HOM05D005758 ORTHO05D007218 7.7e-38 161.4 204 43.6
Lj2A1152G41 Lonicera japonica HOM05D005758 ORTHO05D007218 2.2e-29 133.3 173 45.7
SMO364G0160 Selaginella moellendorffii HOM05D005758 ORTHO05D007218 2.9e-29 132.9 199 35.7
Dinv34622 Davidia involucrata HOM05D005758 ORTHO05D007218 4.2e-28 129.0 95 70.5
Actinidia37512 Actinidia chinensis HOM05D005758 ORTHO05D007218 9.1e-23 111.3 170 40.6
CBR_g49568 Chara braunii HOM05D005758 ORTHO05D007218 2.2e-16 90.1 155 35.5
AL4G26390 Arabidopsis lyrata HOM05D005758 ORTHO05D007218 6.3e-16 88.6 76 56.6
Potri.002G038600 Populus trichocarpa HOM05D005758 ORTHO05D007218 5.7e-09 65.5 41 78.0
Lsat_1_v5_gn_1_81301 Lactuca sativa HOM05D005758 ORTHO05D007218 2.8e-08 63.2 61 50.8
Lsat_1_v5_gn_0_1921 Lactuca sativa HOM05D005758 ORTHO05D007218 7.7e-06 55.1 36 66.7


User provided reference genes

Program Settings