Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc50.169 Carica papaya HOM05D004309 ORTHO05D005588 9.9e-80 300.1 152 100.0
Potri.010G011000 Populus trichocarpa HOM05D004309 ORTHO05D005588 1.5e-59 233.0 150 76.0
Sabra10G0006000 Salix brachista HOM05D004309 ORTHO05D005588 5.7e-59 231.1 129 85.3
GSVIVG01035117001 Vitis vinifera HOM05D004309 ORTHO05D005588 5.7e-59 231.1 130 88.5
Atru.chr4.2894 Acer truncatum HOM05D004309 ORTHO05D005588 1.6e-58 229.6 130 83.8
Ciclev10005665m.g Citrus clementina HOM05D004309 ORTHO05D005588 1.6e-58 229.6 130 86.2
Actinidia00004 Actinidia chinensis HOM05D004309 ORTHO05D005588 3.7e-58 228.4 136 81.6
Dinv29733 Davidia involucrata HOM05D004309 ORTHO05D005588 3.7e-58 228.4 130 86.2
Duzib212G0876 Durio zibethinus HOM05D004309 ORTHO05D005588 8.2e-58 227.3 129 86.8
PGR031G0395 Punica granatum HOM05D004309 ORTHO05D005588 1.1e-57 226.9 131 86.3
Sp7g14390 Schrenkiella parvula HOM05D004309 ORTHO05D005588 1.1e-57 226.9 131 82.4
AT4G15940 Arabidopsis thaliana HOM05D004309 ORTHO05D005588 1.8e-57 226.1 131 82.4
Lj6A680G88 Lonicera japonica HOM05D004309 ORTHO05D005588 1.8e-57 226.1 135 81.5
THA.LOC104802581 Tarenaya hassleriana HOM05D004309 ORTHO05D005588 1.8e-57 226.1 131 83.2
Thecc.04G288300 Theobroma cacao HOM05D004309 ORTHO05D005588 1.8e-57 226.1 130 85.4
BcaC07g37940 Brassica carinata HOM05D004309 ORTHO05D005588 2.4e-57 225.7 131 81.7
CANSAT78G0198 Cannabis sativa HOM05D004309 ORTHO05D005588 2.4e-57 225.7 145 76.6
Carub.0007s2572 Capsella rubella HOM05D004309 ORTHO05D005588 2.4e-57 225.7 131 82.4
Sc19g0005430 Simmondsia chinensis HOM05D004309 ORTHO05D005588 3.1e-57 225.3 131 82.4
A08p12070 Brassica napus HOM05D004309 ORTHO05D005588 4.1e-57 224.9 131 80.9
BraA08t33198Z Brassica rapa HOM05D004309 ORTHO05D005588 4.1e-57 224.9 131 80.9
Thhalv10026185m.g Eutrema salsugineum HOM05D004309 ORTHO05D005588 4.1e-57 224.9 131 81.7
Manes.03G198200 Manihot esculenta HOM05D004309 ORTHO05D005588 4.1e-57 224.9 130 83.8
AL7G39330 Arabidopsis lyrata HOM05D004309 ORTHO05D005588 5.3e-57 224.6 131 80.9
BolC8t48324H Brassica oleracea HOM05D004309 ORTHO05D005588 6.9e-57 224.2 131 80.9
CARHR290520 Cardamine hirsuta HOM05D004309 ORTHO05D005588 9.0e-57 223.8 131 80.9
Gohir.D01G023490 Gossypium hirsutum HOM05D004309 ORTHO05D005588 9.0e-57 223.8 137 81.8
Lj3A823G59 Lonicera japonica HOM05D004309 ORTHO05D005588 9.0e-57 223.8 134 81.3
Gorai.002G028600 Gossypium raimondii HOM05D004309 ORTHO05D005588 2.0e-56 222.6 137 81.0
Hma1.2p1_0078F.1_g040370 Hydrangea macrophylla HOM05D004309 ORTHO05D005588 2.0e-56 222.6 130 84.6
SGA_v2.0_scaffold91G28010 Striga asiatica HOM05D004309 ORTHO05D005588 2.6e-56 222.2 133 83.5
ATR0150G025 Amborella trichopoda HOM05D004309 ORTHO05D005588 3.4e-56 221.9 128 84.4
BcaB04g18344 Brassica carinata HOM05D004309 ORTHO05D005588 3.4e-56 221.9 131 79.4
CAN.G1639.2 Capsicum annuum HOM05D004309 ORTHO05D005588 4.5e-56 221.5 135 80.0
Aqoxy2G02913 Aquilegia oxysepala HOM05D004309 ORTHO05D005588 1.0e-55 220.3 130 81.5
ClCG05G006230 Citrullus lanatus HOM05D004309 ORTHO05D005588 1.3e-55 219.9 123 85.4
Gohir.A01G033033 Gossypium hirsutum HOM05D004309 ORTHO05D005588 1.7e-55 219.5 137 79.6
PSO170G6503 Papaver somniferum HOM05D004309 ORTHO05D005588 1.7e-55 219.5 137 79.6
PSO407G0025 Papaver somniferum HOM05D004309 ORTHO05D005588 1.7e-55 219.5 137 79.6
PSO444G0002 Papaver somniferum HOM05D004309 ORTHO05D005588 1.7e-55 219.5 137 79.6
Sed0001785 Sechium edule HOM05D004309 ORTHO05D005588 1.7e-55 219.5 123 85.4
unitig_749.g13387 Utricularia gibba HOM05D004309 ORTHO05D005588 1.7e-55 219.5 130 80.8
CSS0011476 Camellia sinensis var. sinensis HOM05D004309 ORTHO05D005588 2.2e-55 219.2 130 82.3
Nitab4.5_0006814g0040 Nicotiana tabacum HOM05D004309 ORTHO05D005588 2.2e-55 219.2 138 78.3
QL06p010180 Quercus lobata HOM05D004309 ORTHO05D005588 2.2e-55 219.2 152 73.0
HanXRQChr06g0173801 Helianthus annuus HOM05D004309 ORTHO05D005588 2.9e-55 218.8 126 83.3
Oeu053993.1 Olea europaea HOM05D004309 ORTHO05D005588 2.9e-55 218.8 133 81.2
RcHm_v2.0_Chr4g0423181 Rosa chinensis HOM05D004309 ORTHO05D005588 2.9e-55 218.8 124 82.3
Nitab4.5_0000695g0040 Nicotiana tabacum HOM05D004309 ORTHO05D005588 3.8e-55 218.4 131 80.9
FvH4_4g18580 Fragaria vesca HOM05D004309 ORTHO05D005588 5.0e-55 218.0 124 83.1
FAN07G2872 Fragaria x ananassa HOM05D004309 ORTHO05D005588 5.0e-55 218.0 124 83.1
Lsat_1_v5_gn_3_24101 Lactuca sativa HOM05D004309 ORTHO05D005588 5.0e-55 218.0 126 83.3
Sed0024380 Sechium edule HOM05D004309 ORTHO05D005588 5.0e-55 218.0 123 83.7
Cc03_g01580 Coffea canephora HOM05D004309 ORTHO05D005588 6.5e-55 217.6 130 82.3
SalBow5G3240 Salvia bowleyana HOM05D004309 ORTHO05D005588 8.5e-55 217.2 130 78.5
Hund24883 Selenicereus undatus HOM05D004309 ORTHO05D005588 8.5e-55 217.2 124 84.7
MELO3C006680.2 Cucumis melo HOM05D004309 ORTHO05D005588 1.1e-54 216.9 126 83.3
CDE11G0079 Ceratophyllum demersum HOM05D004309 ORTHO05D005588 1.4e-54 216.5 124 85.5
CsaV3_3G014840 Cucumis sativus L. HOM05D004309 ORTHO05D005588 1.4e-54 216.5 123 83.7
DCAR_023296 Daucus carota HOM05D004309 ORTHO05D005588 1.4e-54 216.5 133 81.2
Migut.N00082 Erythranthe guttata HOM05D004309 ORTHO05D005588 1.4e-54 216.5 130 79.2
TAR633G1513 Trochodendron aralioides HOM05D004309 ORTHO05D005588 2.5e-54 215.7 130 81.5
vmacro08183 Vaccinium macrocarpon HOM05D004309 ORTHO05D005588 2.5e-54 215.7 124 85.5
CiPaw.01G145800 Carya illinoinensis HOM05D004309 ORTHO05D005588 3.2e-54 215.3 131 80.9
Lalb_Chr07g0182331 Lupinus albus HOM05D004309 ORTHO05D005588 3.2e-54 215.3 131 78.6
Prupe.1G125100 Prunus persica HOM05D004309 ORTHO05D005588 4.2e-54 214.9 131 80.9
ECA246G0235 Erigeron canadensis HOM05D004309 ORTHO05D005588 7.2e-54 214.2 126 81.0
Eucgr.C01303 Eucalyptus grandis HOM05D004309 ORTHO05D005588 7.2e-54 214.2 131 82.4
Lj4g0021722 Lotus japonicus HOM05D004309 ORTHO05D007726 7.2e-54 214.2 131 77.1
Solyc01g066480.3 Solanum lycopersicum HOM05D004309 ORTHO05D005588 7.2e-54 214.2 135 76.3
Sopen01g028230 Solanum pennellii HOM05D004309 ORTHO05D005588 7.2e-54 214.2 135 76.3
Psat4g026320 Pisum sativum HOM05D004309 ORTHO05D005588 9.4e-54 213.8 131 77.9
HPP92_010682 Vanilla planifolia HOM05D004309 ORTHO05D005588 1.2e-53 213.4 123 82.1
SEGI_31265 Sequoiadendron giganteum HOM05D004309 ORTHO05D005588 4.6e-53 211.5 135 79.3
Peaxi162Scf00065g01425 Petunia axillaris HOM05D004309 ORTHO05D005588 6.1e-53 211.1 131 77.1
DCAR_027056 Daucus carota HOM05D004309 ORTHO05D005588 1.0e-52 210.3 130 78.5
TPR.G3211 Trifolium pratense HOM05D004309 ORTHO05D005588 1.0e-52 210.3 131 75.6
Rhsim04G0225000 Rhododendron simsii HOM05D004309 ORTHO05D005588 1.4e-52 209.9 124 82.3
Glyma.07G245900 Glycine max HOM05D004309 ORTHO05D005588 2.3e-52 209.1 131 76.3
Glyma.17G028100 Glycine max HOM05D004309 ORTHO05D005588 3.0e-52 208.8 131 76.3
arahy.Tifrunner.gnm1.ann1.9V15EM Arachis hypogaea HOM05D004309 ORTHO05D005588 3.9e-52 208.4 124 80.6
MSTRG.24800 Avicennia marina HOM05D004309 ORTHO05D005588 8.8e-52 207.2 130 77.7
Cfa015422 Carpinus fangiana HOM05D004309 ORTHO05D005588 8.8e-52 207.2 131 80.2
Aa31LG8G3800 Aethionema arabicum HOM05D004309 ORTHO05D005588 2.6e-51 205.7 131 75.6
arahy.Tifrunner.gnm1.ann1.YC35GQ Arachis hypogaea HOM05D004309 ORTHO05D007726 2.6e-51 205.7 124 79.8
VMungo1215G2421 Vigna mungo HOM05D004309 ORTHO05D005588 2.6e-51 205.7 131 75.6
Thhalv10021471m.g Eutrema salsugineum HOM05D004309 ORTHO05D005588 4.4e-51 204.9 131 74.8
AL3G29630 Arabidopsis lyrata HOM05D004309 ORTHO05D005588 5.7e-51 204.5 131 74.8
Carub.0003s1643 Capsella rubella HOM05D004309 ORTHO05D005588 5.7e-51 204.5 131 74.8
Phvul.003G106800 Phaseolus vulgaris HOM05D004309 ORTHO05D005588 7.4e-51 204.1 131 74.8
Sp3g14970 Schrenkiella parvula HOM05D004309 ORTHO05D005588 7.4e-51 204.1 131 74.8
Medtr4g120230 Medicago truncatula HOM05D004309 ORTHO05D005588 2.2e-50 202.6 128 75.0
A01p37620 Brassica napus HOM05D004309 ORTHO05D005588 2.4e-49 199.1 131 72.5
BcaB04g18345 Brassica carinata HOM05D004309 ORTHO05D005588 4.1e-49 198.4 119 81.5
BcaC09g48622 Brassica carinata HOM05D004309 ORTHO05D005588 4.1e-49 198.4 131 72.5
C01p47650 Brassica napus HOM05D004309 ORTHO05D005588 4.1e-49 198.4 131 72.5
BolC1t04737H Brassica oleracea HOM05D004309 ORTHO05D005588 4.1e-49 198.4 131 72.5
BraA01t03822Z Brassica rapa HOM05D004309 ORTHO05D005588 5.3e-49 198.0 131 72.5
Aa31LG10G6200 Aethionema arabicum HOM05D004309 ORTHO05D005588 6.9e-49 197.6 179 59.8
A08p12080 Brassica napus HOM05D004309 ORTHO05D005588 6.9e-49 197.6 131 74.0
BraA08t33199Z Brassica rapa HOM05D004309 ORTHO05D005588 6.9e-49 197.6 131 74.0
Duzib151G0762 Durio zibethinus HOM05D004309 ORTHO05D005588 3.4e-48 195.3 156 64.1
Zm00001eb063500 Zea mays HOM05D004309 ORTHO05D005588 1.0e-47 193.7 134 69.4
EL10Ac3g06636 Beta vulgaris HOM05D004309 ORTHO05D005588 1.7e-47 193.0 123 73.2
AagrBONN_evm.TU.Sc2ySwM_344.4111 Anthoceros agrestis HOM05D004309 ORTHO05D005588 2.2e-47 192.6 132 69.7
AUR62018079 Chenopodium quinoa HOM05D004309 ORTHO05D005588 2.9e-47 192.2 124 72.6
Zm00001eb053490 Zea mays HOM05D004309 ORTHO05D005588 3.8e-47 191.8 134 67.9
Os03g0829000 Oryza sativa ssp. japonica HOM05D004309 ORTHO05D005588 1.9e-46 189.5 127 74.0
TWI09G0267 Tripterygium wilfordii HOM05D004309 ORTHO05D005588 1.9e-46 189.5 108 87.0
Mapoly0093s0048 Marchantia polymorpha HOM05D004309 ORTHO05D005588 3.2e-46 188.7 152 64.5
CBR_g26355 Chara braunii HOM05D004309 ORTHO05D005588 3.9e-44 181.8 131 69.5
Nn3g21534 Nelumbo nucifera HOM05D004309 ORTHO05D005588 2.6e-43 179.1 107 82.2
Pp3c9_26130 Physcomitrium patens HOM05D004309 ORTHO05D005588 8.2e-42 174.1 146 58.2
AT3G16700 Arabidopsis thaliana HOM05D004309 ORTHO05D005588 1.4e-41 173.3 105 77.1
COL.COLO4_13828 Corchorus olitorius HOM05D005069 ORTHO05D006024 4.1e-41 171.8 95 87.4
SMO347G0543 Selaginella moellendorffii HOM05D004309 ORTHO05D005588 5.3e-41 171.4 125 65.6
Ciclev10006277m.g Citrus clementina HOM05D004309 ORTHO05D005588 1.5e-38 163.3 92 84.8
AUR62001364 Chenopodium quinoa HOM05D004309 ORTHO05D005588 3.2e-38 162.2 123 65.0
EL10Ac7g18188 Beta vulgaris HOM05D004309 ORTHO05D005588 7.2e-38 161.0 126 62.7
Hma1.2p1_0078F.1_g040630 Hydrangea macrophylla HOM05D004309 ORTHO05D005588 1.6e-37 159.8 89 87.6
AUR62025637 Chenopodium quinoa HOM05D004309 ORTHO05D005588 2.1e-37 159.5 123 63.4
Ah.08g217630 Amaranthus hybridus HOM05D004309 ORTHO05D005588 3.3e-35 152.1 128 60.2
HPP92_010660 Vanilla planifolia HOM05D004309 ORTHO05D005588 2.8e-34 149.1 89 78.7
PRCOL_00005024 Prasinoderma coloniale HOM05D004309 ORTHO05D005588 3.5e-32 142.1 130 56.2
Sc26g0002580 Simmondsia chinensis HOM05D004309 ORTHO05D005588 7.7e-32 141.0 99 67.7
Os03g0421700 Oryza sativa ssp. japonica HOM05D004309 ORTHO05D005588 1.2e-27 127.1 93 67.7
Peaxi162Scf00454g00328 Petunia axillaris HOM05D004309 ORTHO05D005588 1.5e-22 110.2 71 73.2
Actinidia27753 Actinidia chinensis HOM05D004309 ORTHO05D005588 3.2e-22 109.0 88 61.4
BcaC01g03621 Brassica carinata HOM05D004309 ORTHO05D005588 6.1e-21 104.8 93 61.3
Peaxi162Scf00267g00046 Petunia axillaris HOM05D004309 ORTHO05D005588 2.4e-17 92.8 56 75.0
Zm00001eb065520 Zea mays HOM05D002744 ORTHO05D008989 7.0e-17 91.3 70 62.9
MD04G1020300 Malus domestica HOM05D004309 ORTHO05D005588 7.8e-16 87.8 59 74.6
Zm00001eb419610 Zea mays HOM05D004309 ORTHO05D005588 2.3e-15 86.3 68 60.3
Haze_27427 Corylus avellana HOM05D004309 ORTHO05D005588 1.1e-14 84.0 112 40.2
Haze_27486 Corylus avellana HOM05D004309 ORTHO05D005588 1.9e-14 83.2 126 38.1
BolC3t17332H Brassica oleracea HOM05D004309 ORTHO05D005588 2.5e-14 82.8 92 52.2
SMO353G0001 Selaginella moellendorffii HOM05D004309 ORTHO05D005588 3.3e-14 82.4 123 35.8
C03p50400 Brassica napus HOM05D004309 ORTHO05D005588 1.2e-13 80.5 92 50.0
Pp3c6_20080 Physcomitrium patens HOM05D004309 ORTHO05D005588 8.0e-13 77.8 148 33.1
SEGI_02276 Sequoiadendron giganteum HOM05D004309 ORTHO05D005588 2.3e-12 76.3 123 33.3
Zm00001eb097870 Zea mays HOM05D004309 ORTHO05D026220 6.8e-12 74.7 68 52.9
Zm00001eb085600 Zea mays HOM05D001297 ORTHO05D001135 1.2e-11 73.9 65 53.8
Cre12.g549450 Chlamydomonas reinhardtii HOM05D004309 ORTHO05D005588 1.5e-11 73.6 112 42.9
Zm00001eb194540 Zea mays HOM05D004309 ORTHO05D026220 1.5e-11 73.6 64 54.7
Zm00001eb282740 Zea mays HOM05D004309 ORTHO05D005588 2.0e-11 73.2 66 56.1
Cfa022490 Carpinus fangiana HOM05D004309 ORTHO05D005588 4.4e-11 72.0 91 40.7
Zm00001eb423340 Zea mays HOM05D004309 ORTHO05D026220 5.7e-11 71.6 59 57.6
FAN12G2807 Fragaria x ananassa HOM05D005069 ORTHO05D006024 1.7e-10 70.1 39 79.5
MCO13G238 Micromonas commoda HOM05D004309 ORTHO05D005588 8.3e-10 67.8 120 33.3
RcHm_v2.0_Chr0c32g0501491 Rosa chinensis HOM05D004309 ORTHO05D005588 1.2e-08 63.9 39 76.9
Zm00001eb024340 Zea mays HOM05D004309 ORTHO05D026220 1.2e-08 63.9 79 41.8
Zm00001eb170420 Zea mays HOM05D004309 ORTHO05D026220 2.7e-08 62.8 48 62.5
PRCOL_00000256 Prasinoderma coloniale HOM05D004309 ORTHO05D005588 3.5e-08 62.4 120 34.2
Eucgr.C01444 Eucalyptus grandis HOM05D004309 ORTHO05D005588 1.0e-07 60.8 33 84.8
FAN12G1798 Fragaria x ananassa HOM05D004309 ORTHO05D005588 1.7e-07 60.1 33 78.8
Pp3s34_290 Physcomitrium patens HOM05D000879 ORTHO05D000265 8.6e-07 57.8 116 35.3


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