Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc5.315 Carica papaya HOM05D006923 ORTHO05D008697 1.6e-166 589.3 295 100.0
Ciclev10032274m.g Citrus clementina HOM05D006923 ORTHO05D008697 1.2e-116 423.7 282 76.6
COL.COLO4_36266 Corchorus olitorius HOM05D006923 ORTHO05D008697 3.7e-115 418.7 284 75.7
Gohir.A05G320000 Gossypium hirsutum HOM05D006923 ORTHO05D008697 2.4e-114 416.0 282 74.8
Atru.chr11.1922 Acer truncatum HOM05D006923 ORTHO05D008697 4.5e-113 411.8 285 74.0
Manes.05G093700 Manihot esculenta HOM05D006923 ORTHO05D008697 1.0e-112 410.6 282 75.9
GSVIVG01020133001 Vitis vinifera HOM05D006923 ORTHO05D008697 1.7e-112 409.8 283 74.9
THA.LOC104819679 Tarenaya hassleriana HOM05D006923 ORTHO05D008697 3.8e-112 408.7 284 73.6
QL03p067501 Quercus lobata HOM05D006923 ORTHO05D008697 6.6e-112 407.9 292 73.3
Gorai.009G345900 Gossypium raimondii HOM05D006923 ORTHO05D008697 1.1e-111 407.1 282 73.8
Dinv31139 Davidia involucrata HOM05D006923 ORTHO05D008697 4.3e-111 405.2 284 76.1
Nn4g22963 Nelumbo nucifera HOM05D006923 ORTHO05D008697 1.2e-110 403.7 283 74.2
Gohir.D05G322300 Gossypium hirsutum HOM05D006923 ORTHO05D008697 3.6e-110 402.1 280 73.6
MD13G1084200 Malus domestica HOM05D006923 ORTHO05D008697 1.4e-109 400.2 283 73.1
CiPaw.06G077400 Carya illinoinensis HOM05D006923 ORTHO05D008697 2.3e-109 399.4 277 74.4
Sopen04g001110 Solanum pennellii HOM05D006923 ORTHO05D008697 2.3e-109 399.4 275 74.5
Solyc04g005090.4 Solanum lycopersicum HOM05D006923 ORTHO05D008697 1.2e-108 397.1 284 72.5
AT1G59840 Arabidopsis thaliana HOM05D006923 ORTHO05D008697 4.4e-108 395.2 283 72.8
Carub.0002s0542 Capsella rubella HOM05D006923 ORTHO05D008697 4.4e-108 395.2 284 72.2
AL2G16930 Arabidopsis lyrata HOM05D006923 ORTHO05D008697 7.5e-108 394.4 284 72.5
Thecc.02G238100 Theobroma cacao HOM05D006923 ORTHO05D008697 7.5e-108 394.4 282 71.3
Cfa009080 Carpinus fangiana HOM05D006923 ORTHO05D008697 3.7e-107 392.1 283 72.1
Thhalv10023990m.g Eutrema salsugineum HOM05D006923 ORTHO05D008697 4.9e-107 391.7 282 72.3
TAR629G1985 Trochodendron aralioides HOM05D006923 ORTHO05D008697 4.9e-107 391.7 283 73.1
PGSC0003DMG400001928 Solanum tuberosum HOM05D006923 ORTHO05D008697 6.4e-107 391.3 278 72.7
Aa31LG2G10350 Aethionema arabicum HOM05D006923 ORTHO05D008697 3.2e-106 389.0 281 70.8
AUR62039449 Chenopodium quinoa HOM05D006923 ORTHO05D008697 3.2e-106 389.0 256 75.8
ClCG05G024880 Citrullus lanatus HOM05D006923 ORTHO05D008697 4.1e-106 388.7 286 71.3
CAN.G25.5 Capsicum annuum HOM05D006923 ORTHO05D008697 9.2e-106 387.5 292 70.5
Actinidia24653 Actinidia chinensis HOM05D006923 ORTHO05D008697 1.2e-105 387.1 284 71.5
Migut.L01372 Erythranthe guttata HOM05D006923 ORTHO05D008697 1.2e-105 387.1 283 72.4
PGR102G0681 Punica granatum HOM05D006923 ORTHO05D008697 1.6e-105 386.7 289 70.6
MSTRG.649 Avicennia marina HOM05D006923 ORTHO05D008697 3.5e-105 385.6 283 70.7
EL10Ac6g13089 Beta vulgaris HOM05D006923 ORTHO05D008697 3.5e-105 385.6 303 66.3
HanXRQChr09g0267151 Helianthus annuus HOM05D006923 ORTHO05D008697 3.5e-105 385.6 284 70.8
Sed0028145 Sechium edule HOM05D006923 ORTHO05D008697 6.0e-105 384.8 293 68.9
FAN07G0582 Fragaria x ananassa HOM05D006923 ORTHO05D008697 1.7e-104 383.3 288 71.9
Lj2g0018338 Lotus japonicus HOM05D006923 ORTHO05D008697 3.0e-104 382.5 291 66.7
RcHm_v2.0_Chr4g0444951 Rosa chinensis HOM05D006923 ORTHO05D008697 3.0e-104 382.5 287 71.1
FAN22G1061 Fragaria x ananassa HOM05D006923 ORTHO05D008697 3.9e-104 382.1 288 71.9
Peaxi162Scf00266g00035 Petunia axillaris HOM05D006923 ORTHO05D008697 5.0e-104 381.7 242 78.9
Hund25304 Selenicereus undatus HOM05D006923 ORTHO05D008697 5.0e-104 381.7 297 67.0
CSS0003222 Camellia sinensis var. sinensis HOM05D006923 ORTHO05D008697 1.1e-103 380.6 288 70.8
SGA_v2.0_scaffold166G38306 Striga asiatica HOM05D006923 ORTHO05D008697 1.1e-103 380.6 284 70.1
PSO591G0274 Papaver somniferum HOM05D006923 ORTHO05D008697 4.3e-103 378.6 283 67.8
Potri.008G191900 Populus trichocarpa HOM05D006923 ORTHO05D008697 5.6e-103 378.3 285 71.2
Aqoxy3G03167 Aquilegia oxysepala HOM05D006923 ORTHO05D008697 7.3e-103 377.9 253 76.7
Prupe.1G262600 Prunus persica HOM05D006923 ORTHO05D008697 7.3e-103 377.9 267 72.3
Sp2g04730 Schrenkiella parvula HOM05D006923 ORTHO05D008697 7.3e-103 377.9 282 68.8
BolC1t03615H Brassica oleracea HOM05D006923 ORTHO05D008697 9.5e-103 377.5 274 71.5
Cc11_g13930 Coffea canephora HOM05D006923 ORTHO05D008697 9.5e-103 377.5 298 66.4
FAN12G2795 Fragaria x ananassa HOM05D006923 ORTHO05D008697 2.8e-102 375.9 274 72.3
FvH4_4g35320 Fragaria vesca HOM05D006923 ORTHO05D008697 3.6e-102 375.6 263 73.8
CANSAT01G2170 Cannabis sativa HOM05D006923 ORTHO05D008697 1.1e-101 374.0 288 69.8
BcaC09g49455 Brassica carinata HOM05D006923 ORTHO05D008697 1.8e-101 373.2 296 67.2
CsaV3_5G032010 Cucumis sativus L. HOM05D006923 ORTHO05D008697 1.8e-101 373.2 274 72.3
Phvul.002G078400 Phaseolus vulgaris HOM05D006923 ORTHO05D008697 3.1e-101 372.5 284 67.6
TPR.G26715 Trifolium pratense HOM05D006923 ORTHO05D008697 3.1e-101 372.5 285 67.0
Lj6C798T8 Lonicera japonica HOM05D006923 ORTHO05D008697 4.0e-101 372.1 292 67.1
BcaB04g20234 Brassica carinata HOM05D006923 ORTHO05D008697 2.0e-100 369.8 253 73.5
C01p36540 Brassica napus HOM05D006923 ORTHO05D008697 2.6e-100 369.4 307 64.8
Glyma.02G026400 Glycine max HOM05D006923 ORTHO05D008697 5.8e-100 368.2 290 65.9
Lalb_Chr16g0382621 Lupinus albus HOM05D006923 ORTHO05D008697 5.8e-100 368.2 252 72.2
Aa31LG1G14870 Aethionema arabicum HOM05D006923 ORTHO05D008697 9.8e-100 367.5 288 67.7
Ca_05074_v3 Cicer arietinum L. HOM05D006923 ORTHO05D008697 4.9e-99 365.2 243 74.1
BcaC06g31796 Brassica carinata HOM05D006923 ORTHO05D008697 6.4e-99 364.8 267 70.4
arahy.Tifrunner.gnm1.ann1.EW3DBQ Arachis hypogaea HOM05D006923 ORTHO05D008697 8.3e-99 364.4 301 64.5
CDE04G0355 Ceratophyllum demersum HOM05D006923 ORTHO05D008697 8.3e-99 364.4 274 66.4
A01p28870 Brassica napus HOM05D006923 ORTHO05D008697 1.4e-98 363.6 265 71.3
Rhsim12G0127000 Rhododendron simsii HOM05D006923 ORTHO05D008697 1.4e-98 363.6 293 65.5
Psat2g114680 Pisum sativum HOM05D006923 ORTHO05D008697 1.9e-98 363.2 289 66.1
BraA01t03022Z Brassica rapa HOM05D006923 ORTHO05D008697 9.2e-98 360.9 277 68.2
vmacro16302 Vaccinium macrocarpon HOM05D006923 ORTHO05D008697 1.3e-96 357.1 285 67.0
SalBow2G1484 Salvia bowleyana HOM05D006923 ORTHO05D008697 2.3e-96 356.3 288 65.6
SalBow2G2758 Salvia bowleyana HOM05D006923 ORTHO05D008697 2.3e-96 356.3 288 65.6
Sc11g0001490 Simmondsia chinensis HOM05D006923 ORTHO05D008697 5.6e-95 351.7 269 68.0
ECA246G0266 Erigeron canadensis HOM05D000793 ORTHO05D000783 7.3e-95 351.3 262 71.4
unitig_26.g10329 Utricularia gibba HOM05D006923 ORTHO05D008697 1.2e-94 350.5 284 65.1
CSS0013336 Camellia sinensis var. sinensis HOM05D006923 ORTHO05D008697 3.6e-94 349.0 252 72.2
Nitab4.5_0005168g0020 Nicotiana tabacum HOM05D006923 ORTHO05D008697 1.8e-93 346.7 285 66.7
BcaNung06340 Brassica carinata HOM05D006923 ORTHO05D008697 3.1e-93 345.9 239 72.8
arahy.Tifrunner.gnm1.ann1.NUE0XS Arachis hypogaea HOM05D006923 ORTHO05D008697 4.0e-93 345.5 235 72.8
TWI18G0575 Tripterygium wilfordii HOM05D006923 ORTHO05D008697 1.7e-91 340.1 282 64.5
Sabra08G0145400 Salix brachista HOM05D006923 ORTHO05D008697 1.7e-88 330.1 223 75.3
HPP92_026426 Vanilla planifolia HOM05D006923 ORTHO05D008697 2.5e-87 326.2 233 68.7
Lsat_1_v5_gn_7_91800 Lactuca sativa HOM05D006923 ORTHO05D008697 1.2e-86 323.9 258 66.3
Os04g0650500 Oryza sativa ssp. japonica HOM05D006923 ORTHO05D008697 6.8e-85 318.2 249 63.5
MELO3C012038.2 Cucumis melo HOM05D006923 ORTHO05D008697 1.5e-84 317.0 247 69.6
AUR62026532 Chenopodium quinoa HOM05D006923 ORTHO05D008697 3.2e-82 309.3 248 64.5
Zm00001eb068300 Zea mays HOM05D006923 ORTHO05D008697 5.4e-82 308.5 233 66.1
ATR0624G013 Amborella trichopoda HOM05D006923 ORTHO05D008697 5.1e-80 302.0 270 57.8
Medtr5g037050 Medicago truncatula HOM05D006923 ORTHO05D008697 3.6e-78 295.8 261 60.5
Haze_12112 Corylus avellana HOM05D006923 ORTHO05D008697 6.2e-78 295.0 188 79.8
VMungo1215G1603 Vigna mungo HOM05D006923 ORTHO05D008697 4.0e-77 292.4 239 63.6
Duzib268G0289 Durio zibethinus HOM05D006923 ORTHO05D008697 2.6e-76 289.7 283 58.3
CARHR053250 Cardamine hirsuta HOM05D006923 ORTHO05D008697 1.7e-72 276.9 183 74.9
Pp3c3_23340 Physcomitrium patens HOM05D006923 ORTHO05D008697 7.9e-65 251.5 235 56.2
Mapoly0001s0231 Marchantia polymorpha HOM05D006923 ORTHO05D008697 3.9e-64 249.2 225 56.0
FAN17G2763 Fragaria x ananassa HOM05D006923 ORTHO05D008697 9.6e-63 244.6 274 53.6
CBR_g3926 Chara braunii HOM05D006923 ORTHO05D008697 1.5e-55 220.7 231 46.8
MBI17_g35870_MAGBIO Magnolia biondii HOM05D006923 ORTHO05D008697 2.1e-49 200.3 143 74.1
MCO16G195 Micromonas commoda HOM05D006923 ORTHO05D008697 4.2e-42 176.0 233 41.2
Nitab4.5_0001908g0040 Nicotiana tabacum HOM05D006923 ORTHO05D008697 9.4e-42 174.9 285 43.2
Cre08.g382300 Chlamydomonas reinhardtii HOM05D006923 ORTHO05D008697 3.9e-40 169.5 227 39.6
PRCOL_00003577 Prasinoderma coloniale HOM05D004655 ORTHO05D005567 2.6e-36 156.8 244 37.7
PSO832G3782 Papaver somniferum HOM05D006923 ORTHO05D008697 1.1e-31 141.4 88 76.1
Sed0022420 Sechium edule HOM05D006923 ORTHO05D008697 2.8e-30 136.7 258 38.4
SEGI_22816 Sequoiadendron giganteum HOM05D006923 ORTHO05D008697 4.8e-22 109.4 84 63.1
MBI17_g35869_MAGBIO Magnolia biondii HOM05D006923 ORTHO05D008697 1.0e-19 101.7 98 55.1
AagrBONN_evm.TU.Sc2ySwM_117.4092 Anthoceros agrestis HOM05D006923 ORTHO05D008697 1.1e-18 98.2 135 43.7
VMungo1215G3051 Vigna mungo HOM05D006923 ORTHO05D008697 5.3e-13 79.3 43 83.7
Hma1.2p1_0289F.1_g114510 Hydrangea macrophylla HOM05D006923 ORTHO05D008697 2.9e-11 73.6 61 65.6
CiPaw.05G144000 Carya illinoinensis HOM05D006923 ORTHO05D008697 8.5e-11 72.0 103 46.6
A07p27760 Brassica napus HOM05D006923 ORTHO05D024228 1.1e-10 71.6 70 57.1
BraA07t30415Z Brassica rapa HOM05D006923 ORTHO05D024228 1.1e-10 71.6 70 57.1
BraA08t33759Z Brassica rapa HOM05D020796 ORTHO05D024228 3.2e-10 70.1 70 55.7
SEGI_22360 Sequoiadendron giganteum HOM05D006923 ORTHO05D008697 3.6e-09 66.6 53 52.8
SEGI_10943 Sequoiadendron giganteum HOM05D006923 ORTHO05D008697 7.5e-07 58.9 52 53.8
Rhsim13G0125100 Rhododendron simsii HOM05D000017 ORTHO05D000013 1.7e-06 57.8 61 50.8
C03p46150 Brassica napus HOM05D024156 ORTHO05D027668 3.7e-06 56.6 52 61.5


User provided reference genes

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