Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc5.310 Carica papaya HOM05D004965 ORTHO05D004401 4.1e-43 177.6 83 100.0
Ciclev10033175m.g Citrus clementina HOM05D004965 ORTHO05D004401 1.2e-10 69.7 72 52.8
Thecc.02G237300 Theobroma cacao HOM05D004965 ORTHO05D004401 2.0e-10 68.9 74 54.1
Duzib251G0216 Durio zibethinus HOM05D004965 ORTHO05D004401 8.5e-09 63.5 81 48.1
TAR629G2889 Trochodendron aralioides HOM05D004965 ORTHO05D004401 8.5e-09 63.5 69 49.3
GSVIVG01020127001 Vitis vinifera HOM05D004965 ORTHO05D004401 8.5e-09 63.5 69 49.3
Prupe.1G263100 Prunus persica HOM05D004965 ORTHO05D004401 1.1e-08 63.2 74 47.3
TAR622G1192 Trochodendron aralioides HOM05D004965 ORTHO05D004401 2.5e-08 62.0 69 49.3
Sabra17G0067000 Salix brachista HOM05D004965 ORTHO05D004401 3.2e-08 61.6 69 43.5
Dinv33690 Davidia involucrata HOM05D004965 ORTHO05D004401 4.2e-08 61.2 68 52.9
Potri.017G074600 Populus trichocarpa HOM05D004965 ORTHO05D004401 4.2e-08 61.2 70 41.4
Nn3g17067 Nelumbo nucifera HOM05D004965 ORTHO05D004401 7.2e-08 60.5 67 50.7
Lj2g0004313 Lotus japonicus HOM05D004965 ORTHO05D004401 9.4e-08 60.1 68 48.5
Ciclev10013642m.g Citrus clementina HOM05D004965 ORTHO05D004401 1.2e-07 59.7 86 38.4
Dinv24933 Davidia involucrata HOM05D004965 ORTHO05D004401 1.6e-07 59.3 73 46.6
Duzib268G0529 Durio zibethinus HOM05D004965 ORTHO05D004401 1.6e-07 59.3 78 51.3
TAR374G1442 Trochodendron aralioides HOM05D004965 ORTHO05D004401 1.6e-07 59.3 83 48.2
Glyma.02G025700 Glycine max HOM05D004965 ORTHO05D004401 2.1e-07 58.9 69 49.3
Nn4g22977 Nelumbo nucifera HOM05D004965 ORTHO05D004401 2.1e-07 58.9 47 61.7
Actinidia12285 Actinidia chinensis HOM05D004965 ORTHO05D004401 2.7e-07 58.5 70 47.1
QL02p079418 Quercus lobata HOM05D004965 ORTHO05D004401 2.7e-07 58.5 69 43.5
FAN22G1750 Fragaria x ananassa HOM05D004965 ORTHO05D004401 3.6e-07 58.2 101 40.6
Lalb_Chr09g0326631 Lupinus albus HOM05D004965 ORTHO05D004401 4.7e-07 57.8 75 46.7
Glyma.01G038900 Glycine max HOM05D004965 ORTHO05D004401 6.1e-07 57.4 79 44.3
Potri.008G191500 Populus trichocarpa HOM05D004965 ORTHO05D004401 6.1e-07 57.4 73 46.6
TWI36G1686 Tripterygium wilfordii HOM05D004965 ORTHO05D004401 6.1e-07 57.4 103 40.8
Duzib248G0243 Durio zibethinus HOM05D004965 ORTHO05D004401 8.0e-07 57.0 84 42.9
MD13G1083500 Malus domestica HOM05D004965 ORTHO05D004401 8.0e-07 57.0 69 47.8
FvH4_4g35400 Fragaria vesca HOM05D004965 ORTHO05D004401 1.0e-06 56.6 101 38.6
FAN12G3850 Fragaria x ananassa HOM05D004965 ORTHO05D004401 1.0e-06 56.6 29 79.3
FAN17G0917 Fragaria x ananassa HOM05D004965 ORTHO05D004401 1.0e-06 56.6 101 40.6
Manes.01G193600 Manihot esculenta HOM05D004965 ORTHO05D004401 1.0e-06 56.6 70 45.7
Gorai.001G257800 Gossypium raimondii HOM05D004965 ORTHO05D004401 1.4e-06 56.2 69 46.4
RcHm_v2.0_Chr4g0445011 Rosa chinensis HOM05D004965 ORTHO05D004401 1.4e-06 56.2 78 43.6
Gohir.D07G223500 Gossypium hirsutum HOM05D004965 ORTHO05D004401 1.8e-06 55.8 69 44.9
CSS0014777 Camellia sinensis var. sinensis HOM05D004965 ORTHO05D004401 2.3e-06 55.5 69 46.4
Gohir.A07G216700 Gossypium hirsutum HOM05D004965 ORTHO05D004401 2.3e-06 55.5 69 44.9
Thecc.04G069500 Theobroma cacao HOM05D004965 ORTHO05D004401 2.3e-06 55.5 69 42.0
TAR369G0013 Trochodendron aralioides HOM05D004965 ORTHO05D004401 2.3e-06 55.5 69 43.5
FAN07G0801 Fragaria x ananassa HOM05D004965 ORTHO05D004401 3.0e-06 55.1 101 37.6
MBI04_g09739_MAGBIO Magnolia biondii HOM05D004965 ORTHO05D004401 4.0e-06 54.7 42 59.5
Potri.010G039800 Populus trichocarpa HOM05D004965 ORTHO05D004401 4.0e-06 54.7 93 41.9
CSS0011493 Camellia sinensis var. sinensis HOM05D004965 ORTHO05D004401 5.2e-06 54.3 69 42.0
CiPaw.03G032200 Carya illinoinensis HOM05D004965 ORTHO05D004401 5.2e-06 54.3 69 44.9
Manes.05G094200 Manihot esculenta HOM05D004965 ORTHO05D004401 5.2e-06 54.3 70 44.3
Atru.chr8.2466 Acer truncatum HOM05D004965 ORTHO05D004401 6.8e-06 53.9 84 39.3
ClCG08G009090 Citrullus lanatus HOM05D004965 ORTHO05D004401 6.8e-06 53.9 85 40.0
Lalb_Chr05g0217401 Lupinus albus HOM05D004965 ORTHO05D004401 6.8e-06 53.9 70 47.1
Sed0010056 Sechium edule HOM05D031204 ORTHO05D004401 8.8e-06 53.5 77 42.9


User provided reference genes

Program Settings