Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc5.302 Carica papaya HOM05D007593 ORTHO05D009686 3.9e-230 801.2 427 100.0
Atru.chr11.1889 Acer truncatum HOM05D007593 ORTHO05D009686 1.1e-88 331.3 405 49.9
Duzib268G1169 Durio zibethinus HOM05D007593 ORTHO05D009686 5.6e-88 328.9 407 50.4
Thecc.02G236500 Theobroma cacao HOM05D007593 ORTHO05D009686 5.6e-88 328.9 412 50.5
Prupe.1G263900 Prunus persica HOM05D007593 ORTHO05D009686 7.3e-88 328.6 411 50.1
QL03p066681 Quercus lobata HOM05D007593 ORTHO05D009686 1.5e-85 320.9 460 47.2
Potri.008G190600 Populus trichocarpa HOM05D007593 ORTHO05D009686 1.1e-80 304.7 413 48.9
PGR102G2137 Punica granatum HOM05D007593 ORTHO05D009686 1.9e-80 303.9 415 47.0
FAN12G3835 Fragaria x ananassa HOM05D007593 ORTHO05D009686 1.2e-77 294.7 232 65.9
TWI75G0370 Tripterygium wilfordii HOM05D007593 ORTHO05D009686 9.9e-77 291.6 329 53.8
MD13G1083000 Malus domestica HOM05D007593 ORTHO05D009686 1.7e-76 290.8 373 50.4
Manes.01G193300 Manihot esculenta HOM05D007593 ORTHO05D009686 2.4e-75 287.0 405 45.9
FAN17G2874 Fragaria x ananassa HOM05D007593 ORTHO05D009686 2.7e-74 283.5 400 44.5
FAN07G2090 Fragaria x ananassa HOM05D007593 ORTHO05D009686 1.3e-71 274.6 402 44.5
FvH4_4g35470 Fragaria vesca HOM05D007593 ORTHO05D009686 5.3e-70 269.2 426 44.1
Glyma.02G025300 Glycine max HOM05D007593 ORTHO05D009686 2.6e-69 266.9 241 60.6
Sabra08G0144600 Salix brachista HOM05D007593 ORTHO05D009686 5.8e-69 265.8 426 45.8
CiPaw.06G078500 Carya illinoinensis HOM05D007593 ORTHO05D009686 1.4e-67 261.2 361 49.0
Aqoxy3G00839 Aquilegia oxysepala HOM05D007593 ORTHO05D009686 4.2e-67 259.6 252 55.6
AUR62026494 Chenopodium quinoa HOM05D007593 ORTHO05D009686 4.2e-67 259.6 229 59.8
RcHm_v2.0_Chr4g0445111 Rosa chinensis HOM05D007593 ORTHO05D009686 5.5e-67 259.2 234 60.3
BolC5t29606H Brassica oleracea HOM05D007593 ORTHO05D009686 7.1e-67 258.8 249 59.4
Sc04g0008660 Simmondsia chinensis HOM05D007593 ORTHO05D009686 7.1e-67 258.8 237 57.4
Nn3g17072 Nelumbo nucifera HOM05D007593 ORTHO05D009686 1.6e-66 257.7 391 43.5
AUR62026300 Chenopodium quinoa HOM05D007593 ORTHO05D009686 3.0e-65 253.4 401 43.1
VMungo1215G1938 Vigna mungo HOM05D007593 ORTHO05D009686 3.0e-65 253.4 252 56.7
Phvul.002G079500 Phaseolus vulgaris HOM05D007593 ORTHO05D009686 3.9e-65 253.1 250 56.8
BcaC05g24886 Brassica carinata HOM05D007593 ORTHO05D009686 8.7e-65 251.9 249 58.2
A06p07060 Brassica napus HOM05D007593 ORTHO05D009686 1.1e-64 251.5 241 60.2
PSO161G0019 Papaver somniferum HOM05D007593 ORTHO05D009686 3.3e-64 250.0 323 47.7
AL1G21190 Arabidopsis lyrata HOM05D007593 ORTHO05D009686 4.3e-64 249.6 250 56.8
FAN22G1720 Fragaria x ananassa HOM05D007593 ORTHO05D009686 5.7e-64 249.2 410 42.2
Gorai.009G346400 Gossypium raimondii HOM05D007593 ORTHO05D009686 7.4e-64 248.8 449 40.8
Hma1.2p1_0289F.1_g114430 Hydrangea macrophylla HOM05D007593 ORTHO05D009686 9.6e-64 248.4 399 44.1
Carub.0001s0986 Capsella rubella HOM05D007593 ORTHO05D009686 1.2e-61 241.5 250 56.0
Sabra11G0071900 Salix brachista HOM05D007593 ORTHO05D009686 2.0e-61 240.7 406 44.1
Sabra11G0071700 Salix brachista HOM05D007593 ORTHO05D009686 1.0e-60 238.4 257 54.5
FAN12G2740 Fragaria x ananassa HOM05D007593 ORTHO05D009686 1.3e-60 238.0 378 43.1
Glyma.01G039400 Glycine max HOM05D007593 ORTHO05D009686 2.9e-60 236.9 250 54.4
Gohir.D05G322700 Gossypium hirsutum HOM05D007593 ORTHO05D009686 4.9e-60 236.1 241 56.4
C05p08550 Brassica napus HOM05D007593 ORTHO05D009686 6.5e-60 235.7 280 51.8
Actinidia01171 Actinidia chinensis HOM05D007593 ORTHO05D009686 3.2e-59 233.4 400 42.5
Lsat_1_v5_gn_8_160680 Lactuca sativa HOM05D007593 ORTHO05D009686 9.3e-59 231.9 210 58.1
CARHR010560 Cardamine hirsuta HOM05D007593 ORTHO05D009686 3.9e-57 226.5 238 55.9
EL10Ac6g13115 Beta vulgaris HOM05D007593 ORTHO05D009686 2.5e-56 223.8 276 48.6
Gohir.A05G320500 Gossypium hirsutum HOM05D007593 ORTHO05D009686 5.7e-56 222.6 250 53.6
AT1G10417 Arabidopsis thaliana HOM05D007593 ORTHO05D009686 2.2e-55 220.7 250 52.4
Thhalv10007877m.g Eutrema salsugineum HOM05D007593 ORTHO05D009686 3.7e-55 219.9 235 55.7
Psat2g115200 Pisum sativum HOM05D007593 ORTHO05D009686 6.3e-55 219.2 250 50.8
Ciclev10032856m.g Citrus clementina HOM05D007593 ORTHO05D009686 1.4e-54 218.0 167 68.9
GSVIVG01020118001 Vitis vinifera HOM05D007593 ORTHO05D009686 9.0e-54 215.3 167 67.1
COL.COLO4_36239 Corchorus olitorius HOM05D007593 ORTHO05D009686 7.7e-53 212.2 208 58.2
Nitab4.5_0002542g0050 Nicotiana tabacum HOM05D007593 ORTHO05D009686 7.7e-53 212.2 402 40.8
BraA06t23921Z Brassica rapa HOM05D007593 ORTHO05D009686 1.6e-50 204.5 444 38.7
Medtr5g037260 Medicago truncatula HOM05D007593 ORTHO05D009686 1.4e-49 201.4 235 49.8
Nitab4.5_0000791g0030 Nicotiana tabacum HOM05D007593 ORTHO05D009686 2.3e-49 200.7 391 40.2
TAR629G1096 Trochodendron aralioides HOM05D007593 ORTHO05D009686 3.0e-49 200.3 156 67.9
CANSAT07G0001 Cannabis sativa HOM05D007593 ORTHO05D009686 4.1e-46 189.9 285 43.9
Haze_12082 Corylus avellana HOM05D007593 ORTHO05D009686 4.1e-46 189.9 187 60.4
ECA233G4970 Erigeron canadensis HOM05D007593 ORTHO05D009686 4.1e-46 189.9 203 50.2
Ca_04684_v3 Cicer arietinum L. HOM05D007593 ORTHO05D009686 5.3e-46 189.5 167 62.3
HanXRQChr12g0371131 Helianthus annuus HOM05D007593 ORTHO05D009686 2.6e-45 187.2 182 55.5
arahy.Tifrunner.gnm1.ann1.M4LE0B Arachis hypogaea HOM05D007593 ORTHO05D009686 5.5e-43 179.5 186 53.2
Rhsim12G0127800 Rhododendron simsii HOM05D007593 ORTHO05D009686 5.5e-43 179.5 197 54.3
BcaC05g24925 Brassica carinata HOM05D007593 ORTHO05D009686 9.4e-43 178.7 236 47.0
Eucgr.B03393 Eucalyptus grandis HOM05D007593 ORTHO05D009686 2.8e-39 167.2 134 64.2
Cc11_g13810 Coffea canephora HOM05D007593 ORTHO05D009686 1.8e-38 164.5 168 52.4
Hund25291 Selenicereus undatus HOM05D007593 ORTHO05D009686 3.2e-35 153.7 109 75.2
Lj2g0003805 Lotus japonicus HOM05D007593 ORTHO05D009686 1.6e-34 151.4 241 41.5
vmacro16309 Vaccinium macrocarpon HOM05D007593 ORTHO05D009686 8.2e-31 139.0 155 48.4
CAN.G27.56 Capsicum annuum HOM05D007593 ORTHO05D009686 2.0e-29 134.4 221 41.6
BcaC05g24887 Brassica carinata HOM05D007593 ORTHO05D009686 7.7e-29 132.5 167 47.9
Lalb_Chr05g0217441 Lupinus albus HOM05D007593 ORTHO05D009686 2.2e-23 114.4 127 48.0
Lalb_Chr05g0217431 Lupinus albus HOM05D007593 ORTHO05D009686 1.4e-22 111.7 111 61.3
DCAR_031078 Daucus carota HOM05D007593 ORTHO05D009686 4.2e-19 100.1 146 40.4
Zm00001eb223170 Zea mays HOM05D007593 ORTHO05D009686 1.2e-18 98.6 142 38.7
Sp1g09040 Schrenkiella parvula HOM05D007593 ORTHO05D009686 7.0e-14 82.8 238 30.3
Sabra15G0067100 Salix brachista HOM05D007593 ORTHO05D009686 2.7e-13 80.9 73 63.0
AagrBONN_evm.TU.Sc2ySwM_228.4242 Anthoceros agrestis HOM05D007593 ORTHO05D009686 2.9e-12 77.4 177 27.1
TPR.G26746 Trifolium pratense HOM05D007593 ORTHO05D009686 3.3e-11 73.9 68 63.2
Peaxi162Scf00209g00948 Petunia axillaris HOM05D007593 ORTHO05D009686 2.1e-10 71.2 133 37.6
CSS0023539 Camellia sinensis var. sinensis HOM05D007593 ORTHO05D009686 4.0e-09 67.0 114 42.1
TAR629G0814 Trochodendron aralioides HOM05D007593 ORTHO05D009686 5.2e-09 66.6 65 55.4
arahy.Tifrunner.gnm1.ann1.YHM9KM Arachis hypogaea HOM05D007593 ORTHO05D009686 8.3e-07 59.3 59 57.6
CDE07G1947 Ceratophyllum demersum HOM05D007593 ORTHO05D009686 2.4e-06 57.8 101 35.6
Ciclev10033560m.g Citrus clementina HOM05D007593 ORTHO05D009686 9.2e-06 55.8 51 62.7


User provided reference genes

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