Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc5.234 Carica papaya HOM05D006207 ORTHO05D007868 1.8e-176 622.5 315 100.0
THA.LOC104823306 Tarenaya hassleriana HOM05D006207 ORTHO05D007868 5.7e-114 414.8 316 66.1
AT3G08780 Arabidopsis thaliana HOM05D006207 ORTHO05D007868 8.0e-108 394.4 314 65.9
Aa31LG5G18780 Aethionema arabicum HOM05D006207 ORTHO05D007868 1.4e-107 393.7 300 67.3
Thhalv10021171m.g Eutrema salsugineum HOM05D006207 ORTHO05D007868 5.7e-106 388.3 314 63.4
Sp3g07200 Schrenkiella parvula HOM05D006207 ORTHO05D007868 2.2e-105 386.3 316 63.6
AL3G19780 Arabidopsis lyrata HOM05D006207 ORTHO05D007868 1.1e-104 384.0 314 65.0
CARHR083100 Cardamine hirsuta HOM05D006207 ORTHO05D007868 4.1e-104 382.1 315 63.8
C05p59060 Brassica napus HOM05D006207 ORTHO05D007868 2.0e-103 379.8 315 62.9
Manes.09G111300 Manihot esculenta HOM05D006207 ORTHO05D007868 3.5e-103 379.0 316 63.3
Carub.0003s0791 Capsella rubella HOM05D006207 ORTHO05D007868 7.8e-103 377.9 314 63.1
BolC5t34558H Brassica oleracea HOM05D006207 ORTHO05D007868 1.5e-101 373.6 315 62.9
BraA05t22911Z Brassica rapa HOM05D006207 ORTHO05D007868 1.5e-98 363.6 315 61.0
A05p40020 Brassica napus HOM05D006207 ORTHO05D007868 5.8e-98 361.7 315 61.3
CANSAT35G0048 Cannabis sativa HOM05D006207 ORTHO05D007868 6.4e-97 358.2 315 61.0
MELO3C026025.2 Cucumis melo HOM05D006207 ORTHO05D007868 3.5e-95 352.4 322 59.0
Duzib093G0843 Durio zibethinus HOM05D006207 ORTHO05D007868 7.8e-95 351.3 317 62.1
CiPaw.09G215000 Carya illinoinensis HOM05D006207 ORTHO05D007868 1.0e-94 350.9 319 59.9
CsaV3_4G026760 Cucumis sativus L. HOM05D006207 ORTHO05D007868 1.3e-94 350.5 324 58.6
Thecc.05G007100 Theobroma cacao HOM05D006207 ORTHO05D007868 8.6e-94 347.8 319 60.8
Sed0003544 Sechium edule HOM05D006207 ORTHO05D007868 1.9e-93 346.7 319 58.0
GSVIVG01030275001 Vitis vinifera HOM05D006207 ORTHO05D002478 3.6e-92 342.4 315 58.4
Gohir.A01G229800 Gossypium hirsutum HOM05D006207 ORTHO05D007868 1.1e-91 340.9 317 61.2
COL.COLO4_14454 Corchorus olitorius HOM05D006207 ORTHO05D007868 1.8e-91 340.1 315 61.0
ClCG04G006690 Citrullus lanatus HOM05D006207 ORTHO05D007868 2.3e-91 339.7 322 57.1
Ciclev10012309m.g Citrus clementina HOM05D006207 ORTHO05D007868 6.8e-91 338.2 320 58.4
Actinidia29070 Actinidia chinensis HOM05D006207 ORTHO05D007868 2.6e-90 336.3 322 56.5
Gorai.002G266400 Gossypium raimondii HOM05D006207 ORTHO05D007868 2.6e-90 336.3 317 60.3
Gohir.A09G167800 Gossypium hirsutum HOM05D006207 ORTHO05D007868 4.4e-90 335.5 314 59.9
Gohir.D01G219700 Gossypium hirsutum HOM05D006207 ORTHO05D007868 4.4e-90 335.5 317 60.3
Actinidia11552 Actinidia chinensis HOM05D006207 ORTHO05D007868 5.8e-90 335.1 322 57.5
Atru.chr8.2331 Acer truncatum HOM05D006207 ORTHO05D007868 2.2e-89 333.2 325 55.7
Dinv35401 Davidia involucrata HOM05D006207 ORTHO05D007868 6.4e-89 331.6 328 55.5
Prupe.6G284500 Prunus persica HOM05D006207 ORTHO05D007868 6.4e-89 331.6 320 58.1
Sed0019485 Sechium edule HOM05D006207 ORTHO05D007868 1.4e-88 330.5 324 55.2
TAR633G0541 Trochodendron aralioides HOM05D006207 ORTHO05D007868 4.1e-88 328.9 320 57.2
Gorai.006G185200 Gossypium raimondii HOM05D006207 ORTHO05D007868 5.4e-88 328.6 314 58.3
TAR623G0507 Trochodendron aralioides HOM05D006207 ORTHO05D007868 3.5e-87 325.9 324 56.2
RcHm_v2.0_Chr3g0461671 Rosa chinensis HOM05D006207 ORTHO05D007868 1.1e-85 320.9 317 54.9
Gohir.D09G163700 Gossypium hirsutum HOM05D006207 ORTHO05D007868 1.9e-85 320.1 314 58.0
Duzib106G1231 Durio zibethinus HOM05D006207 ORTHO05D007868 6.2e-84 315.1 305 59.7
CSS0029336 Camellia sinensis var. sinensis HOM05D006207 ORTHO05D007868 1.8e-83 313.5 328 54.9
Lj3g0024527 Lotus japonicus HOM05D006207 ORTHO05D007868 4.0e-83 312.4 317 55.5
Dinv12164 Davidia involucrata HOM05D006207 ORTHO05D007868 1.2e-82 310.8 331 54.7
FAN05G3975 Fragaria x ananassa HOM05D006207 ORTHO05D007868 4.4e-82 308.9 318 54.4
FAN05G5543 Fragaria x ananassa HOM05D006207 ORTHO05D007868 1.3e-81 307.4 318 53.5
Nn2g11009 Nelumbo nucifera HOM05D006207 ORTHO05D007868 2.9e-81 306.2 304 54.9
TWI53G1221 Tripterygium wilfordii HOM05D006207 ORTHO05D007868 6.4e-81 305.1 311 55.3
Phvul.010G064400 Phaseolus vulgaris HOM05D006207 ORTHO05D007868 1.1e-80 304.3 327 52.9
PGR031G0899 Punica granatum HOM05D006207 ORTHO05D007868 1.1e-80 304.3 311 53.4
vmacro08907 Vaccinium macrocarpon HOM05D006207 ORTHO05D007868 4.1e-80 302.4 322 52.8
QL07p033964 Quercus lobata HOM05D006207 ORTHO05D007868 1.6e-79 300.4 319 51.7
arahy.Tifrunner.gnm1.ann1.S95MPE Arachis hypogaea HOM05D006207 ORTHO05D007868 2.7e-79 299.7 343 51.6
Aqoxy1G01290 Aquilegia oxysepala HOM05D006207 ORTHO05D007868 4.6e-79 298.9 338 51.2
BcaC05g29617 Brassica carinata HOM05D006207 ORTHO05D007868 4.6e-79 298.9 270 59.6
Psat7g249160 Pisum sativum HOM05D006207 ORTHO05D007868 6.0e-79 298.5 333 52.6
Lalb_Chr12g0207271 Lupinus albus HOM05D006207 ORTHO05D007868 2.3e-78 296.6 320 52.8
Sabra16G0120700 Salix brachista HOM05D006207 ORTHO05D007868 2.3e-78 296.6 322 50.6
Potri.016G126200 Populus trichocarpa HOM05D006207 ORTHO05D007868 3.3e-77 292.7 322 50.0
TWI74G1498 Tripterygium wilfordii HOM05D006207 ORTHO05D007868 9.6e-77 291.2 311 53.4
FvH4_6g10650 Fragaria vesca HOM05D006207 ORTHO05D007868 1.2e-76 290.8 318 51.9
FAN14G5611 Fragaria x ananassa HOM05D006207 ORTHO05D007868 1.2e-76 290.8 318 51.9
arahy.Tifrunner.gnm1.ann1.WBCD4G Arachis hypogaea HOM05D006207 ORTHO05D007868 1.6e-76 290.4 344 50.3
PGSC0003DMG400017108 Solanum tuberosum HOM05D006207 ORTHO05D007868 1.6e-76 290.4 324 49.4
CAN.G967.4 Capsicum annuum HOM05D006207 ORTHO05D007868 2.8e-76 289.7 320 49.7
FAN09G2678 Fragaria x ananassa HOM05D006207 ORTHO05D007868 3.6e-76 289.3 318 51.9
Glyma.01G125600 Glycine max HOM05D006207 ORTHO05D007868 6.2e-76 288.5 318 51.3
Glyma.U032705 Glycine max HOM05D006207 ORTHO05D007868 1.4e-75 287.3 321 50.2
Sopen09g008460 Solanum pennellii HOM05D006207 ORTHO05D007868 1.4e-75 287.3 324 49.1
Cc06_g00770 Coffea canephora HOM05D006207 ORTHO05D002478 2.6e-74 283.1 322 48.8
Rhsim04G0125000 Rhododendron simsii HOM05D006207 ORTHO05D007868 8.4e-73 278.1 318 50.0
SHI12871 Sapria himalayana HOM05D006207 ORTHO05D007868 4.2e-72 275.8 309 50.8
Lsat_1_v5_gn_8_103441 Lactuca sativa HOM05D006207 ORTHO05D007868 5.4e-72 275.4 322 48.1
VMungo0331G1865 Vigna mungo HOM05D006207 ORTHO05D007868 5.4e-72 275.4 314 50.0
CDE07G0940 Ceratophyllum demersum HOM05D006207 ORTHO05D007868 7.1e-72 275.0 318 50.9
Sc01g0005970 Simmondsia chinensis HOM05D006207 ORTHO05D007868 2.7e-71 273.1 323 48.6
Oeu057638.1 Olea europaea HOM05D006207 ORTHO05D007868 1.0e-70 271.2 317 46.1
Nitab4.5_0000230g0180 Nicotiana tabacum HOM05D006207 ORTHO05D007868 1.3e-70 270.8 303 49.8
Cfa017117 Carpinus fangiana HOM05D006207 ORTHO05D007868 2.3e-70 270.0 299 51.2
Nitab4.5_0015157g0010 Nicotiana tabacum HOM05D006207 ORTHO05D007868 3.0e-70 269.6 304 49.7
TPR.G5270 Trifolium pratense HOM05D006207 ORTHO05D007868 1.1e-69 267.7 328 47.0
vmacro20324 Vaccinium macrocarpon HOM05D006207 ORTHO05D007868 6.2e-68 261.9 308 49.0
Oeu038722.1 Olea europaea HOM05D006207 ORTHO05D007868 2.0e-66 256.9 316 45.3
Peaxi162Scf00744g00339 Petunia axillaris HOM05D006207 ORTHO05D007868 2.0e-66 256.9 337 45.1
EL10Ac5g12487 Beta vulgaris HOM05D006207 ORTHO05D007868 5.8e-66 255.4 321 47.7
Migut.J00099 Erythranthe guttata HOM05D006207 ORTHO05D007868 4.9e-65 252.3 316 46.2
HanXRQChr16g0510291 Helianthus annuus HOM05D006207 ORTHO05D007868 7.1e-64 248.4 319 46.4
DCAR_023998 Daucus carota HOM05D006207 ORTHO05D007868 3.0e-62 243.0 320 44.7
MSTRG.5544 Avicennia marina HOM05D006207 ORTHO05D007868 5.6e-61 238.8 316 44.0
MBI03_g07303_MAGBIO Magnolia biondii HOM05D006207 ORTHO05D007868 9.6e-61 238.0 311 45.7
Medtr4g014250 Medicago truncatula HOM05D006207 ORTHO05D007868 1.3e-60 237.7 308 44.2
PSO765G0078 Papaver somniferum HOM05D006207 ORTHO05D007868 2.1e-60 236.9 325 44.6
HPP92_019707 Vanilla planifolia HOM05D006207 ORTHO05D007868 1.1e-59 234.6 326 43.9
CDE06G0694 Ceratophyllum demersum HOM05D006207 ORTHO05D007868 1.5e-58 230.7 315 45.4
ECA236G5132 Erigeron canadensis HOM05D006207 ORTHO05D007868 1.4e-56 224.2 316 43.7
unitig_27.g24873 Utricularia gibba HOM05D006207 ORTHO05D007868 1.4e-56 224.2 315 44.1
ATR0594G098 Amborella trichopoda HOM05D006207 ORTHO05D007868 3.9e-54 216.1 302 44.7
Ah.12g059050 Amaranthus hybridus HOM05D006207 ORTHO05D007868 6.7e-54 215.3 304 44.1
Lj2C67T4 Lonicera japonica HOM05D006207 ORTHO05D007868 1.5e-50 204.1 199 53.8
Solyc09g015180.4 Solanum lycopersicum HOM05D006207 ORTHO05D007868 1.0e-46 191.4 245 45.7
SEGI_14997 Sequoiadendron giganteum HOM05D006207 ORTHO05D007868 6.7e-46 188.7 395 33.9
Pp3c3_16910 Physcomitrium patens HOM05D006207 ORTHO05D007868 6.9e-43 178.7 349 35.0
Lj3P946T49 Lonicera japonica HOM05D006207 ORTHO05D007868 1.9e-40 170.6 186 50.5
AUR62030762 Chenopodium quinoa HOM05D006207 ORTHO05D007868 5.5e-40 169.1 300 37.3
Rhsim05G0225500 Rhododendron simsii HOM05D006207 ORTHO05D007868 2.1e-39 167.2 182 51.1
Duzib128G0456 Durio zibethinus HOM05D006207 ORTHO05D007868 5.1e-38 162.5 181 53.0
Os07g0540200 Oryza sativa ssp. japonica HOM05D006207 ORTHO05D007868 1.4e-32 144.4 308 35.4
MD04G1166200 Malus domestica HOM05D006207 ORTHO05D007868 5.5e-32 142.5 170 52.4
AagrBONN_evm.TU.Sc2ySwM_368.1939 Anthoceros agrestis HOM05D006207 ORTHO05D007868 4.7e-31 139.4 399 27.8
Zm00001eb163300 Zea mays HOM05D006207 ORTHO05D007868 1.3e-28 131.3 315 31.4
AUR62030533 Chenopodium quinoa HOM05D006207 ORTHO05D007868 3.7e-28 129.8 137 48.2
CBR_g48858 Chara braunii HOM05D006207 ORTHO05D007868 1.0e-25 121.7 343 30.0
Ca_20352_v3 Cicer arietinum L. HOM05D006207 ORTHO05D007868 6.7e-22 109.0 91 58.2
Os04g0479300 Oryza sativa ssp. japonica HOM05D006207 ORTHO05D007868 4.4e-21 106.3 309 29.8
MD04G1166100 Malus domestica HOM05D006207 ORTHO05D007868 1.1e-19 101.7 66 74.2
Zm00001eb421620 Zea mays HOM05D006207 ORTHO05D007868 1.0e-17 95.1 218 32.1
SalBow6G1507 Salvia bowleyana HOM05D000800 ORTHO05D000658 1.5e-13 81.3 106 39.6
VMungo1215G0839 Vigna mungo HOM05D006207 ORTHO05D007868 2.6e-13 80.5 77 49.4
Mapoly0060s0108 Marchantia polymorpha HOM05D006207 ORTHO05D007868 1.4e-11 74.7 326 24.8
VMungo1309G1345 Vigna mungo HOM05D006207 ORTHO05D007868 5.9e-10 69.3 69 46.4
SalBow2G0248 Salvia bowleyana HOM05D007863 ORTHO05D009265 4.7e-07 59.7 103 32.0
Cc08_g04640 Coffea canephora HOM05D006207 ORTHO05D007868 1.4e-06 58.2 78 41.0
SalBow8G1578 Salvia bowleyana HOM05D006207 ORTHO05D007868 2.3e-06 57.4 78 42.3
VMungo0647G0753 Vigna mungo HOM05D006207 ORTHO05D007868 2.3e-06 57.4 122 36.9


User provided reference genes

Program Settings