Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc5.217 Carica papaya HOM05D007529 ORTHO05D007451 3.3e-71 271.6 131 100.0
Potri.006G044801 Populus trichocarpa HOM05D007529 ORTHO05D007451 3.5e-17 92.0 75 56.0
Dinv30288 Davidia involucrata HOM05D007529 ORTHO05D007451 3.0e-16 89.0 80 52.5
Sabra06G0031000 Salix brachista HOM05D005255 ORTHO05D006276 3.0e-16 89.0 81 49.4
Manes.09G016732 Manihot esculenta HOM05D007529 ORTHO05D007451 1.5e-15 86.7 79 54.4
Manes.09G016600 Manihot esculenta HOM05D007529 ORTHO05D007451 3.3e-15 85.5 79 53.2
TWI74G0965 Tripterygium wilfordii HOM05D007529 ORTHO05D007451 4.3e-15 85.1 74 52.7
Nitab4.5_0001618g0110 Nicotiana tabacum HOM05D007529 ORTHO05D007451 5.7e-15 84.7 85 49.4
Peaxi162Scf00130g00112 Petunia axillaris HOM05D007529 ORTHO05D007451 5.7e-15 84.7 72 52.8
Nitab4.5_0011420g0010 Nicotiana tabacum HOM05D007529 ORTHO05D007451 9.6e-15 84.0 85 48.2
Nn2g15054 Nelumbo nucifera HOM05D007529 ORTHO05D007451 2.1e-14 82.8 104 46.2
PGR142G2784 Punica granatum HOM05D007529 ORTHO05D007451 2.1e-14 82.8 75 53.3
Glyma.02G191900 Glycine max HOM05D007529 ORTHO05D007451 2.8e-14 82.4 74 50.0
HanXRQChr17g0545881 Helianthus annuus HOM05D007529 ORTHO05D007451 3.7e-14 82.0 90 46.7
MBI19_g17527_MAGBIO Magnolia biondii HOM05D007529 ORTHO05D007451 3.7e-14 82.0 79 48.1
Atru.chr1.1251 Acer truncatum HOM05D007529 ORTHO05D007451 4.8e-14 81.6 114 40.4
Ciclev10006854m.g Citrus clementina HOM05D007529 ORTHO05D007451 4.8e-14 81.6 78 51.3
FAN14G0143 Fragaria x ananassa HOM05D007529 ORTHO05D007451 4.8e-14 81.6 87 43.7
Phvul.007G249000 Phaseolus vulgaris HOM05D007529 ORTHO05D007451 4.8e-14 81.6 82 48.8
Nn1g01084 Nelumbo nucifera HOM05D007529 ORTHO05D007451 8.2e-14 80.9 103 48.5
FvH4_6g24810 Fragaria vesca HOM05D007529 ORTHO05D007451 1.1e-13 80.5 87 42.5
DCAR_013619 Daucus carota HOM05D007529 ORTHO05D007451 1.4e-13 80.1 76 51.3
FAN17G0712 Fragaria x ananassa HOM05D007529 ORTHO05D007451 1.8e-13 79.7 87 42.5
VMungo0720G2145 Vigna mungo HOM05D007529 ORTHO05D007451 3.1e-13 79.0 84 46.4
MD14G1081300 Malus domestica HOM05D007529 ORTHO05D007451 4.1e-13 78.6 70 48.6
Eucgr.K01581 Eucalyptus grandis HOM05D007529 ORTHO05D007451 5.3e-13 78.2 82 45.1
Prupe.7G049500 Prunus persica HOM05D007529 ORTHO05D007451 6.9e-13 77.8 66 51.5
FAN07G2804 Fragaria x ananassa HOM05D007529 ORTHO05D007451 9.0e-13 77.4 87 40.2
FAN22G0851 Fragaria x ananassa HOM05D007529 ORTHO05D007451 1.2e-12 77.0 87 41.4
COL.COLO4_30902 Corchorus olitorius HOM05D007529 ORTHO05D007451 1.5e-12 76.6 75 46.7
Haze_19755 Corylus avellana HOM05D007529 ORTHO05D007451 1.5e-12 76.6 74 52.7
FvH4_4g15460 Fragaria vesca HOM05D007529 ORTHO05D007451 1.5e-12 76.6 87 40.2
THA.LOC104825175 Tarenaya hassleriana HOM05D007529 ORTHO05D007451 1.5e-12 76.6 71 50.7
FAN22G0252 Fragaria x ananassa HOM05D007529 ORTHO05D007451 2.0e-12 76.3 87 39.1
Potri.004G076800 Populus trichocarpa HOM05D007529 ORTHO05D007451 2.0e-12 76.3 75 49.3
EL10Ac3g07171 Beta vulgaris HOM05D007529 ORTHO05D007451 2.6e-12 75.9 92 41.3
FAN12G3128 Fragaria x ananassa HOM05D007529 ORTHO05D007451 2.6e-12 75.9 87 40.2
QL07p004579 Quercus lobata HOM05D007529 ORTHO05D007451 3.4e-12 75.5 78 47.4
CsaV3_4G021910 Cucumis sativus L. HOM05D007529 ORTHO05D007451 5.9e-12 74.7 76 50.0
FvH4_4g15570 Fragaria vesca HOM05D007529 ORTHO05D007451 7.6e-12 74.3 87 37.9
Sc19g0008410 Simmondsia chinensis HOM05D007529 ORTHO05D007451 7.6e-12 74.3 76 46.1
Lalb_Chr02g0156441 Lupinus albus HOM05D007529 ORTHO05D007451 1.0e-11 73.9 82 46.3
Cfa016748 Carpinus fangiana HOM05D002613 ORTHO05D003140 1.3e-11 73.6 74 52.7
arahy.Tifrunner.gnm1.ann1.5P9T4R Arachis hypogaea HOM05D007529 ORTHO05D007451 1.7e-11 73.2 75 52.0
ECA248G1753 Erigeron canadensis HOM05D007529 ORTHO05D007451 2.2e-11 72.8 71 50.7
MELO3C014209.2 Cucumis melo HOM05D007529 ORTHO05D007451 3.8e-11 72.0 76 47.4
Lsat_1_v5_gn_5_161020 Lactuca sativa HOM05D007529 ORTHO05D007451 3.8e-11 72.0 90 42.2
Gohir.D01G183900 Gossypium hirsutum HOM05D007529 ORTHO05D007451 6.5e-11 71.2 81 44.4
Gorai.002G227400 Gossypium raimondii HOM05D007529 ORTHO05D007451 6.5e-11 71.2 81 44.4
RcHm_v2.0_Chr3g0484581 Rosa chinensis HOM05D007529 ORTHO05D007451 6.5e-11 71.2 70 47.1
FAN17G2871 Fragaria x ananassa HOM05D007529 ORTHO05D011815 8.4e-11 70.9 87 40.2
SalBow1G4167 Salvia bowleyana HOM05D007529 ORTHO05D007451 8.4e-11 70.9 84 45.2
unitig_899.g15088 Utricularia gibba HOM05D007529 ORTHO05D007451 8.4e-11 70.9 72 50.0
Solyc04g017670.3 Solanum lycopersicum HOM05D007529 ORTHO05D007451 1.9e-10 69.7 93 40.9
CANSAT80G2089 Cannabis sativa HOM05D007529 ORTHO05D007451 2.5e-10 69.3 77 45.5
Migut.K00115 Erythranthe guttata HOM05D007529 ORTHO05D007451 2.5e-10 69.3 80 45.0
Sopen04g008750 Solanum pennellii HOM05D007529 ORTHO05D007451 2.5e-10 69.3 94 40.4
SGA_v2.0_scaffold21G09330 Striga asiatica HOM05D007529 ORTHO05D007451 3.2e-10 68.9 80 46.2
CANSAT80G1192 Cannabis sativa HOM05D007529 ORTHO05D007451 4.2e-10 68.6 77 42.9
Actinidia38146 Actinidia chinensis HOM05D000001 ORTHO05D009995 7.2e-10 67.8 88 39.8
Ah.13g076730 Amaranthus hybridus HOM05D007529 ORTHO05D007451 7.2e-10 67.8 79 44.3
AUR62030393 Chenopodium quinoa HOM05D007529 ORTHO05D007451 9.3e-10 67.4 100 38.0
Gohir.A01G193700 Gossypium hirsutum HOM05D007529 ORTHO05D007451 9.3e-10 67.4 81 42.0
TPR.G19652 Trifolium pratense HOM05D007529 ORTHO05D007451 9.3e-10 67.4 70 51.4
ClCG04G003960 Citrullus lanatus HOM05D007529 ORTHO05D007451 1.2e-09 67.0 79 44.3
Sed0023165 Sechium edule HOM05D007529 ORTHO05D007451 2.1e-09 66.2 71 46.5
PSO384G2280 Papaver somniferum HOM05D007529 ORTHO05D007451 3.5e-09 65.5 82 37.8
CsaV3_4G021970 Cucumis sativus L. HOM05D007529 ORTHO05D007451 4.6e-09 65.1 110 35.5
Psat6g093280 Pisum sativum HOM05D007529 ORTHO05D007451 4.6e-09 65.1 81 46.9
HanXRQChr01g0008291 Helianthus annuus HOM05D007529 ORTHO05D007451 7.9e-09 64.3 78 44.9
Zm00001eb150670 Zea mays HOM05D007529 ORTHO05D007451 7.9e-09 64.3 54 51.9
Ca_23805_v3 Cicer arietinum L. HOM05D007529 ORTHO05D007451 1.0e-08 63.9 68 52.9
HPP92_011341 Vanilla planifolia HOM05D007529 ORTHO05D007451 1.3e-08 63.5 82 46.3
HPP92_011264 Vanilla planifolia HOM05D007529 ORTHO05D007451 1.8e-08 63.2 82 46.3
Medtr1g041810 Medicago truncatula HOM05D007529 ORTHO05D007451 2.3e-08 62.8 64 54.7
ClCG04G003940 Citrullus lanatus HOM05D007529 ORTHO05D007451 3.0e-08 62.4 74 43.2
MELO3C014210.2 Cucumis melo HOM05D007529 ORTHO05D007451 3.9e-08 62.0 75 40.0
THA.LOC104816403 Tarenaya hassleriana HOM05D007529 ORTHO05D007451 8.7e-08 60.8 88 38.6
Cc06_g18420 Coffea canephora HOM05D007529 ORTHO05D007451 6.3e-06 54.7 52 50.0


User provided reference genes

Program Settings