Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc5.152 Carica papaya HOM05D003842 ORTHO05D004436 2.4e-51 205.3 111 100.0
Phvul.001G181800 Phaseolus vulgaris HOM05D003842 ORTHO05D004436 2.4e-38 162.2 108 80.6
Thecc.05G072900 Theobroma cacao HOM05D003842 ORTHO05D004436 9.0e-38 160.2 112 78.6
Dinv35821 Davidia involucrata HOM05D003842 ORTHO05D004436 2.0e-37 159.1 106 79.2
Gohir.D11G342350 Gossypium hirsutum HOM05D003842 ORTHO05D004436 3.4e-37 158.3 112 77.7
Gorai.007G372400 Gossypium raimondii HOM05D003842 ORTHO05D004436 3.4e-37 158.3 112 77.7
Nn6g35197 Nelumbo nucifera HOM05D003842 ORTHO05D004436 3.4e-37 158.3 111 78.4
Glyma.19G186900 Glycine max HOM05D003842 ORTHO05D004436 4.5e-37 157.9 108 76.9
MD12G1104900 Malus domestica HOM05D003842 ORTHO05D004436 4.5e-37 157.9 107 77.6
Ciclev10024523m.g Citrus clementina HOM05D003842 ORTHO05D004436 5.8e-37 157.5 111 76.6
CiPaw.09G003300 Carya illinoinensis HOM05D003842 ORTHO05D004436 9.9e-37 156.8 111 77.5
COL.COLO4_26897 Corchorus olitorius HOM05D003842 ORTHO05D004436 9.9e-37 156.8 107 80.4
Lalb_Chr20g0112381 Lupinus albus HOM05D003842 ORTHO05D004436 1.3e-36 156.4 108 75.9
Manes.08G013802 Manihot esculenta HOM05D003842 ORTHO05D004436 1.3e-36 156.4 111 76.6
Lj1g0002569 Lotus japonicus HOM05D003842 ORTHO05D004436 1.7e-36 156.0 102 78.4
CANSAT80G2389 Cannabis sativa HOM05D003842 ORTHO05D004436 2.9e-36 155.2 107 76.6
Cfa016461 Carpinus fangiana HOM05D003842 ORTHO05D004436 3.8e-36 154.8 111 77.5
Ca_08873_v3 Cicer arietinum L. HOM05D003842 ORTHO05D004436 4.9e-36 154.5 108 72.2
Atru.chr8.1723 Acer truncatum HOM05D003842 ORTHO05D004436 6.4e-36 154.1 111 76.6
Atru.chr8.1733 Acer truncatum HOM05D003842 ORTHO05D004436 6.4e-36 154.1 111 76.6
arahy.Tifrunner.gnm1.ann1.BQYP5G Arachis hypogaea HOM05D003842 ORTHO05D004436 6.4e-36 154.1 108 76.9
Haze_19462 Corylus avellana HOM05D003842 ORTHO05D004436 6.4e-36 154.1 106 80.2
Duzib106G1778 Durio zibethinus HOM05D003842 ORTHO05D004436 6.4e-36 154.1 107 78.5
TAR633G0529 Trochodendron aralioides HOM05D003842 ORTHO05D004436 6.4e-36 154.1 106 80.2
Duzib093G0118 Durio zibethinus HOM05D003842 ORTHO05D004436 1.4e-35 152.9 112 75.0
Hma1.2p1_0547F.1_g176420 Hydrangea macrophylla HOM05D003842 ORTHO05D004436 1.4e-35 152.9 111 74.8
Medtr7g102430 Medicago truncatula HOM05D003842 ORTHO05D004436 1.9e-35 152.5 108 73.1
FvH4_6g17010 Fragaria vesca HOM05D003842 ORTHO05D004436 2.4e-35 152.1 107 74.8
FAN05G0072 Fragaria x ananassa HOM05D003842 ORTHO05D004436 2.4e-35 152.1 107 74.8
THA.LOC104818591 Tarenaya hassleriana HOM05D003842 ORTHO05D004436 2.4e-35 152.1 107 74.8
A04p28120 Brassica napus HOM05D003842 ORTHO05D004436 3.2e-35 151.8 111 76.6
BolC4t28040H Brassica oleracea HOM05D003842 ORTHO05D004436 3.2e-35 151.8 111 76.6
FAN05G4099 Fragaria x ananassa HOM05D003842 ORTHO05D004436 3.2e-35 151.8 107 74.8
MELO3C024492.2 Cucumis melo HOM05D003842 ORTHO05D004436 4.2e-35 151.4 101 77.2
FAN02G1267 Fragaria x ananassa HOM05D003842 ORTHO05D004436 4.2e-35 151.4 107 73.8
FAN09G2316 Fragaria x ananassa HOM05D003842 ORTHO05D004436 4.2e-35 151.4 107 73.8
CsaV3_6G040160 Cucumis sativus L. HOM05D003842 ORTHO05D004436 5.4e-35 151.0 101 77.2
FAN14G4083 Fragaria x ananassa HOM05D003842 ORTHO05D004436 5.4e-35 151.0 111 74.8
BcaC02g07579 Brassica carinata HOM05D003842 ORTHO05D004436 7.1e-35 150.6 111 76.6
CSS0021824 Camellia sinensis var. sinensis HOM05D003842 ORTHO05D004436 7.1e-35 150.6 111 76.6
CSS0023266 Camellia sinensis var. sinensis HOM05D003842 ORTHO05D004436 7.1e-35 150.6 111 76.6
Aa31LG5G22020 Aethionema arabicum HOM05D003842 ORTHO05D004436 9.3e-35 150.2 111 76.6
Ah.08g211380 Amaranthus hybridus HOM05D003842 ORTHO05D004436 9.3e-35 150.2 106 75.5
arahy.Tifrunner.gnm1.ann1.CVPH5H Arachis hypogaea HOM05D003842 ORTHO05D004436 9.3e-35 150.2 103 78.6
Sed0026042 Sechium edule HOM05D003842 ORTHO05D004436 9.3e-35 150.2 101 77.2
EL10Ac7g16718 Beta vulgaris HOM05D003842 ORTHO05D004436 1.6e-34 149.4 106 75.5
C04p65510 Brassica napus HOM05D003842 ORTHO05D004436 1.6e-34 149.4 111 75.7
BraA04t18297Z Brassica rapa HOM05D003842 ORTHO05D004436 1.6e-34 149.4 111 75.7
Prupe.7G124700 Prunus persica HOM05D003842 ORTHO05D004436 2.1e-34 149.1 107 74.8
QL07p041738 Quercus lobata HOM05D003842 ORTHO05D004436 2.1e-34 149.1 111 73.9
TPR.G15450 Trifolium pratense HOM05D003842 ORTHO05D004436 2.7e-34 148.7 103 73.8
TWI74G0820 Tripterygium wilfordii HOM05D003842 ORTHO05D004436 2.7e-34 148.7 113 74.3
RcHm_v2.0_Chr3g0471001 Rosa chinensis HOM05D003842 ORTHO05D004436 3.5e-34 148.3 102 74.5
Sp4g19070 Schrenkiella parvula HOM05D003842 ORTHO05D004436 3.5e-34 148.3 111 75.7
AT2G36810 Arabidopsis thaliana HOM05D003842 ORTHO05D004436 4.6e-34 147.9 111 75.7
Psat3g040280 Pisum sativum HOM05D003842 ORTHO05D004436 4.6e-34 147.9 106 71.7
MSTRG.26674 Avicennia marina HOM05D003842 ORTHO05D004436 6.0e-34 147.5 111 72.1
Carub.0004s1865 Capsella rubella HOM05D003842 ORTHO05D004436 6.0e-34 147.5 111 75.7
Sc20g0005740 Simmondsia chinensis HOM05D003842 ORTHO05D004436 6.0e-34 147.5 111 73.0
AUR62042272 Chenopodium quinoa HOM05D003842 ORTHO05D004436 7.9e-34 147.1 107 74.8
PSO063G4107 Papaver somniferum HOM05D003842 ORTHO05D004436 1.0e-33 146.7 106 75.5
GSVIVG01033696001 Vitis vinifera HOM05D003842 ORTHO05D004436 1.0e-33 146.7 111 73.0
Potri.006G120800 Populus trichocarpa HOM05D003842 ORTHO05D004436 1.3e-33 146.4 111 73.9
vmacro07325 Vaccinium macrocarpon HOM05D003842 ORTHO05D004436 1.3e-33 146.4 111 73.0
AL4G33000 Arabidopsis lyrata HOM05D003842 ORTHO05D004436 1.8e-33 146.0 111 74.8
SGA_v2.0_scaffold224G42922 Striga asiatica HOM05D003842 ORTHO05D004436 1.8e-33 146.0 111 71.2
Cc06_g04620 Coffea canephora HOM05D003842 ORTHO05D004436 2.3e-33 145.6 111 70.3
PSO339G3623 Papaver somniferum HOM05D003842 ORTHO05D004436 3.0e-33 145.2 106 74.5
AUR62036532 Chenopodium quinoa HOM05D003842 ORTHO05D004436 3.9e-33 144.8 108 70.4
Eucgr.K02432 Eucalyptus grandis HOM05D003842 ORTHO05D004436 8.7e-33 143.7 111 72.1
Actinidia28923 Actinidia chinensis HOM05D003842 ORTHO05D004436 1.5e-32 142.9 106 74.5
Migut.L01724 Erythranthe guttata HOM05D003842 ORTHO05D004436 1.5e-32 142.9 111 69.4
Aqoxy1G01066 Aquilegia oxysepala HOM05D003842 ORTHO05D004436 1.9e-32 142.5 111 71.2
PGR142G1271 Punica granatum HOM05D003842 ORTHO05D004436 1.9e-32 142.5 107 72.0
Actinidia26647 Actinidia chinensis HOM05D003842 ORTHO05D004436 4.3e-32 141.4 106 73.6
CAN.G1038.13 Capsicum annuum HOM05D003842 ORTHO05D004436 9.6e-32 140.2 111 67.6
HanXRQChr13g0400661 Helianthus annuus HOM05D003842 ORTHO05D004436 1.3e-31 139.8 102 68.6
Sabra06G0095000 Salix brachista HOM05D003842 ORTHO05D004436 1.3e-31 139.8 111 72.1
Solyc09g008490.4 Solanum lycopersicum HOM05D003842 ORTHO05D004436 1.1e-30 136.7 111 67.6
Sopen09g003320 Solanum pennellii HOM05D003842 ORTHO05D004436 1.1e-30 136.7 111 67.6
ECA233G4297 Erigeron canadensis HOM05D003842 ORTHO05D004436 3.1e-30 135.2 101 67.3
ATR0043G024 Amborella trichopoda HOM05D003842 ORTHO05D004436 4.5e-29 131.3 103 64.1
Lsat_1_v5_gn_6_28640 Lactuca sativa HOM05D003842 ORTHO05D004436 7.6e-29 130.6 93 71.0
Zm00001eb003810 Zea mays HOM05D003842 ORTHO05D004436 1.7e-28 129.4 111 64.0
ClCG04G009540 Citrullus lanatus HOM05D003842 ORTHO05D004436 5.5e-27 124.4 119 60.5
Nitab4.5_0002535g0020 Nicotiana tabacum HOM05D003842 ORTHO05D004436 9.3e-27 123.6 102 65.7
Gohir.A11G323300 Gossypium hirsutum HOM05D003842 ORTHO05D004436 2.7e-26 122.1 77 79.2
HPP92_022597 Vanilla planifolia HOM05D003842 ORTHO05D004436 3.0e-25 118.6 106 61.3
Ca_08928_v3 Cicer arietinum L. HOM05D003842 ORTHO05D004436 5.1e-25 117.9 77 72.7
Thhalv10016131m.g Eutrema salsugineum HOM05D003842 ORTHO05D004436 1.5e-24 116.3 79 81.0
SEGI_24462 Sequoiadendron giganteum HOM05D003842 ORTHO05D004436 7.9e-18 94.0 99 49.5
DCAR_020802 Daucus carota HOM05D003842 ORTHO05D004436 9.0e-14 80.5 61 55.7
Lj3A992G55 Lonicera japonica HOM05D003842 ORTHO05D004436 9.0e-14 80.5 107 53.3
Mapoly0008s0039 Marchantia polymorpha HOM05D003842 ORTHO05D004436 1.0e-09 67.0 123 35.0
Gohir.A09G144350 Gossypium hirsutum HOM05D003842 ORTHO05D004436 1.9e-08 62.8 45 71.1
Gorai.006G160800 Gossypium raimondii HOM05D003842 ORTHO05D004436 1.9e-08 62.8 45 71.1
Rhsim03G0088500 Rhododendron simsii HOM05D003842 ORTHO05D004436 8.2e-07 57.4 45 66.7


User provided reference genes

Program Settings