Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc5.102 Carica papaya HOM05D002004 ORTHO05D118681 2.0e-94 349.4 209 100.0
Thhalv10020471m.g Eutrema salsugineum HOM05D002004 ORTHO05D002089 6.2e-24 115.2 161 50.9
THA.LOC104826936 Tarenaya hassleriana HOM05D002004 ORTHO05D002089 1.1e-23 114.4 159 50.3
CARHR084530 Cardamine hirsuta HOM05D002004 ORTHO05D002089 1.8e-23 113.6 163 51.5
AL3G21340 Arabidopsis lyrata HOM05D002004 ORTHO05D002089 2.4e-23 113.2 165 49.7
Sp3g08340 Schrenkiella parvula HOM05D002004 ORTHO05D002089 5.3e-23 112.1 162 50.0
Aa31LG3G2560 Aethionema arabicum HOM05D002004 ORTHO05D002089 2.2e-21 106.7 163 54.0
AT3G10030 Arabidopsis thaliana HOM05D002004 ORTHO05D002089 6.5e-21 105.1 166 48.8
Carub.0003s0913 Capsella rubella HOM05D002004 ORTHO05D002089 1.6e-19 100.5 165 47.3
BraA05t22693Z Brassica rapa HOM05D002004 ORTHO05D002089 6.7e-18 95.1 168 52.4
C05p58050 Brassica napus HOM05D002004 ORTHO05D002089 8.7e-18 94.7 168 47.0
BolC5t34461H Brassica oleracea HOM05D002004 ORTHO05D002089 1.1e-17 94.4 167 47.3
A05p39020 Brassica napus HOM05D002004 ORTHO05D002089 1.3e-16 90.9 168 54.2
PGR004G2607 Punica granatum HOM05D002004 ORTHO05D002089 6.2e-16 88.6 151 41.7
TWI53G1136 Tripterygium wilfordii HOM05D002004 ORTHO05D002089 1.0e-13 81.3 155 41.3
TWI77G0431 Tripterygium wilfordii HOM05D002004 ORTHO05D002089 5.5e-12 75.5 156 40.4
CSS0008966 Camellia sinensis var. sinensis HOM05D002004 ORTHO05D002089 4.6e-11 72.4 160 44.4
Nn2g13961 Nelumbo nucifera HOM05D002004 ORTHO05D002089 1.8e-10 70.5 171 33.9
CSS0043737 Camellia sinensis var. sinensis HOM05D002004 ORTHO05D002089 6.7e-10 68.6 160 43.8
Dinv35857 Davidia involucrata HOM05D002004 ORTHO05D002089 1.5e-09 67.4 175 40.0
Prupe.7G120600 Prunus persica HOM05D002004 ORTHO05D002089 2.5e-09 66.6 159 34.6
CiPaw.09G007200 Carya illinoinensis HOM05D002004 ORTHO05D002089 4.3e-09 65.9 151 50.3
DCAR_015027 Daucus carota HOM05D002004 ORTHO05D002089 7.4e-09 65.1 176 44.3
Cfa016511 Carpinus fangiana HOM05D002004 ORTHO05D002089 4.8e-08 62.4 131 51.1
Eucgr.A01571 Eucalyptus grandis HOM05D002004 ORTHO05D002089 4.8e-08 62.4 67 52.2
TAR369G0230 Trochodendron aralioides HOM05D002004 ORTHO05D002089 8.2e-08 61.6 170 34.7
Nitab4.5_0009834g0010 Nicotiana tabacum HOM05D002004 ORTHO05D002089 1.8e-07 60.5 164 36.6
Nitab4.5_0000680g0040 Nicotiana tabacum HOM05D002004 ORTHO05D002089 5.3e-07 58.9 150 37.3
Haze_19513 Corylus avellana HOM05D002004 ORTHO05D002089 6.9e-07 58.5 131 36.6
Manes.09G061000 Manihot esculenta HOM05D002004 ORTHO05D002089 9.0e-07 58.2 168 35.7
Dinv37383 Davidia involucrata HOM05D002004 ORTHO05D002089 1.5e-06 57.4 84 46.4
Cc06_g05030 Coffea canephora HOM05D002004 ORTHO05D002089 2.0e-06 57.0 159 33.3
QL07p040902 Quercus lobata HOM05D002004 ORTHO05D002089 2.6e-06 56.6 173 50.3


User provided reference genes

Program Settings