Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc49.90 Carica papaya HOM05D007679 ORTHO05D009560 6.3e-92 340.9 190 100.0
Cpa.g.sc49.91 Carica papaya HOM05D007679 ORTHO05D009560 6.0e-58 228.0 192 67.2
Cpa.g.sc49.92 Carica papaya HOM05D007679 ORTHO05D009560 1.5e-24 117.1 165 41.8
Cfa018299 Carpinus fangiana HOM05D004894 ORTHO05D005689 5.9e-13 78.6 163 31.9
Haze_17777 Corylus avellana HOM05D004894 ORTHO05D005689 2.2e-12 76.6 158 32.9
Prupe.8G038100 Prunus persica HOM05D004894 ORTHO05D005689 3.8e-12 75.9 139 33.8
Haze_17791 Corylus avellana HOM05D004894 ORTHO05D009560 5.0e-12 75.5 160 31.2
MD10G1032700 Malus domestica HOM05D004894 ORTHO05D005689 5.0e-12 75.5 159 32.7
COL.COLO4_34260 Corchorus olitorius HOM05D007679 ORTHO05D009560 8.5e-12 74.7 160 31.9
QL02p037592 Quercus lobata HOM05D004894 ORTHO05D005689 1.1e-11 74.3 159 30.8
QL02p038562 Quercus lobata HOM05D004894 ORTHO05D005689 1.4e-11 73.9 159 31.4
Haze_17792 Corylus avellana HOM05D004894 ORTHO05D005689 1.9e-11 73.6 158 32.3
Cfa018298 Carpinus fangiana HOM05D004894 ORTHO05D005689 3.2e-11 72.8 158 31.6
Medtr4g062290 Medicago truncatula HOM05D004894 ORTHO05D005689 4.2e-11 72.4 152 36.8
Cpa.g.sc49.93 Carica papaya HOM05D007679 ORTHO05D009560 5.5e-11 72.0 174 32.2
Cfa018297 Carpinus fangiana HOM05D004894 ORTHO05D005689 5.5e-11 72.0 157 29.9
Gorai.009G256400 Gossypium raimondii HOM05D007679 ORTHO05D009560 5.5e-11 72.0 164 33.5
Gorai.009G255800 Gossypium raimondii HOM05D007679 ORTHO05D009560 7.2e-11 71.6 198 31.8
Gohir.D05G245700 Gossypium hirsutum HOM05D007679 ORTHO05D009560 9.4e-11 71.2 198 31.8
Gorai.009G256000 Gossypium raimondii HOM05D007679 ORTHO05D009560 1.2e-10 70.9 198 29.8
Gorai.009G257300 Gossypium raimondii HOM05D007679 ORTHO05D009560 2.1e-10 70.1 163 33.7
Manes.02G182301 Manihot esculenta HOM05D004894 ORTHO05D005689 2.1e-10 70.1 149 32.9
QL02p037589 Quercus lobata HOM05D004894 ORTHO05D005689 2.1e-10 70.1 153 32.0
SHI09078 Sapria himalayana HOM05D004894 ORTHO05D005689 2.1e-10 70.1 149 30.9
Gorai.009G256100 Gossypium raimondii HOM05D007679 ORTHO05D009560 2.7e-10 69.7 178 31.5
Gorai.009G257500 Gossypium raimondii HOM05D007679 ORTHO05D009560 2.7e-10 69.7 154 32.5
Gohir.A05G245150 Gossypium hirsutum HOM05D007679 ORTHO05D009560 3.6e-10 69.3 178 32.6
QL02p038558 Quercus lobata HOM05D004894 ORTHO05D005689 6.1e-10 68.6 153 31.4
Thecc.08G156900 Theobroma cacao HOM05D007679 ORTHO05D009560 6.1e-10 68.6 168 32.1
Gohir.A13G213133 Gossypium hirsutum HOM05D007679 ORTHO05D009560 7.9e-10 68.2 164 31.1
Gohir.A13G213166 Gossypium hirsutum HOM05D007679 ORTHO05D009560 7.9e-10 68.2 164 31.1
Gohir.A13G213199 Gossypium hirsutum HOM05D007679 ORTHO05D009560 7.9e-10 68.2 164 31.1
Gohir.A05G245201 Gossypium hirsutum HOM05D007679 ORTHO05D009560 1.0e-09 67.8 178 32.0
MD10G1032600 Malus domestica HOM05D004894 ORTHO05D005689 1.0e-09 67.8 161 29.8
Carub.0008s1007 Capsella rubella HOM05D007751 ORTHO05D009813 1.4e-09 67.4 122 36.9
Gohir.1Z049488 Gossypium hirsutum HOM05D007679 ORTHO05D009560 1.4e-09 67.4 154 31.8
Gohir.A05G245251 Gossypium hirsutum HOM05D007679 ORTHO05D009560 1.4e-09 67.4 154 31.8
Gohir.A13G213100 Gossypium hirsutum HOM05D007679 ORTHO05D009560 2.3e-09 66.6 164 31.1
Gohir.A13G213232 Gossypium hirsutum HOM05D007679 ORTHO05D009560 2.3e-09 66.6 164 31.1
Gorai.009G256900 Gossypium raimondii HOM05D007679 ORTHO05D009560 2.3e-09 66.6 182 30.8
Gorai.009G257000 Gossypium raimondii HOM05D007679 ORTHO05D009560 2.3e-09 66.6 182 30.8
Gorai.009G257100 Gossypium raimondii HOM05D007679 ORTHO05D009560 2.3e-09 66.6 182 30.8
Gorai.009G256800 Gossypium raimondii HOM05D007679 ORTHO05D009560 3.0e-09 66.2 163 33.7
Gorai.N024500 Gossypium raimondii HOM05D007679 ORTHO05D009560 3.0e-09 66.2 163 32.5
Gohir.D05G246050 Gossypium hirsutum HOM05D007679 ORTHO05D009560 5.1e-09 65.5 162 32.1
Gorai.009G256200 Gossypium raimondii HOM05D007679 ORTHO05D009560 5.1e-09 65.5 164 29.9
Gohir.A05G245318 Gossypium hirsutum HOM05D007679 ORTHO05D009560 6.7e-09 65.1 198 30.8
Gorai.009G256300 Gossypium raimondii HOM05D007679 ORTHO05D009560 8.8e-09 64.7 174 30.5
Manes.02G182200 Manihot esculenta HOM05D004894 ORTHO05D009560 8.8e-09 64.7 162 30.9
AL8G24070 Arabidopsis lyrata HOM05D007751 ORTHO05D009813 1.1e-08 64.3 158 30.4
Glyma.16G164600 Glycine max HOM05D004894 ORTHO05D005689 1.1e-08 64.3 171 32.2
Gohir.A05G244700 Gossypium hirsutum HOM05D007679 ORTHO05D009560 1.1e-08 64.3 182 31.3
Gohir.A05G251500 Gossypium hirsutum HOM05D007679 ORTHO05D009560 1.1e-08 64.3 161 30.4
CiPaw.16G009500 Carya illinoinensis HOM05D004894 ORTHO05D005689 1.5e-08 63.9 168 29.8
Glyma.02G080000 Glycine max HOM05D004894 ORTHO05D005689 1.5e-08 63.9 171 33.3
Gorai.009G257700 Gossypium raimondii HOM05D007679 ORTHO05D009560 1.5e-08 63.9 130 34.6
Gorai.009G264900 Gossypium raimondii HOM05D007679 ORTHO05D009560 1.5e-08 63.9 153 31.4
Gohir.A05G245500 Gossypium hirsutum HOM05D007679 ORTHO05D009560 2.0e-08 63.5 130 34.6
Gorai.009G257400 Gossypium raimondii HOM05D007679 ORTHO05D009560 2.0e-08 63.5 163 31.9
Psat6g191360 Pisum sativum HOM05D004894 ORTHO05D005689 2.0e-08 63.5 145 32.4
TPR.G12635 Trifolium pratense HOM05D004894 ORTHO05D005689 2.0e-08 63.5 150 33.3
Duzib041G0498 Durio zibethinus HOM05D007679 ORTHO05D009560 2.6e-08 63.2 138 34.1
Gohir.D05G247000 Gossypium hirsutum HOM05D007679 ORTHO05D009560 2.6e-08 63.2 130 34.6
Gorai.009G257600 Gossypium raimondii HOM05D007679 ORTHO05D009560 2.6e-08 63.2 164 31.7
Thecc.08G157300 Theobroma cacao HOM05D007679 ORTHO05D009560 2.6e-08 63.2 149 30.2
Gohir.1Z049388 Gossypium hirsutum HOM05D007679 ORTHO05D009560 3.3e-08 62.8 178 31.5
Gohir.D05G246800 Gossypium hirsutum HOM05D007679 ORTHO05D009560 3.3e-08 62.8 164 31.1
Gohir.A05G245300 Gossypium hirsutum HOM05D007679 ORTHO05D009560 4.4e-08 62.4 154 31.8
RcHm_v2.0_Chr6g0274541 Rosa chinensis HOM05D004894 ORTHO05D009560 4.4e-08 62.4 166 30.1
COL.COLO4_08899 Corchorus olitorius HOM05D007679 ORTHO05D009560 5.7e-08 62.0 158 28.5
Gohir.D05G246900 Gossypium hirsutum HOM05D007679 ORTHO05D009560 5.7e-08 62.0 164 29.9
Gohir.D05G252300 Gossypium hirsutum HOM05D007679 ORTHO05D009560 5.7e-08 62.0 153 31.4
Sabra13G0011900 Salix brachista HOM05D004894 ORTHO05D009560 5.7e-08 62.0 156 30.1
Gorai.009G255700 Gossypium raimondii HOM05D007679 ORTHO05D009560 7.4e-08 61.6 169 30.8
TWI34G1211 Tripterygium wilfordii HOM05D004894 ORTHO05D005689 7.4e-08 61.6 150 30.0
Gohir.A05G245054 Gossypium hirsutum HOM05D007679 ORTHO05D009560 1.3e-07 60.8 178 30.3
Gohir.D05G245800 Gossypium hirsutum HOM05D007679 ORTHO05D009560 1.3e-07 60.8 198 27.3
Lj2g0017521 Lotus japonicus HOM05D004894 ORTHO05D005689 1.3e-07 60.8 170 31.2
Solyc09g092170.3 Solanum lycopersicum HOM05D024866 ORTHO05D024787 1.3e-07 60.8 154 27.3
Gohir.A05G245390 Gossypium hirsutum HOM05D007679 ORTHO05D009560 2.2e-07 60.1 154 29.2
Aa31sc47G40 Aethionema arabicum HOM05D007751 ORTHO05D009813 2.8e-07 59.7 156 26.9
Gohir.A05G244800 Gossypium hirsutum HOM05D007679 ORTHO05D009560 2.8e-07 59.7 154 30.5
Ciclev10003770m.g Citrus clementina HOM05D004894 ORTHO05D005689 3.7e-07 59.3 150 30.0
Lalb_Chr03g0035461 Lupinus albus HOM05D004894 ORTHO05D005689 3.7e-07 59.3 164 31.7
Lalb_Chr19g0130051 Lupinus albus HOM05D004894 ORTHO05D005689 3.7e-07 59.3 153 34.0
Lalb_Chr19g0130071 Lupinus albus HOM05D004894 ORTHO05D005689 3.7e-07 59.3 153 34.0
BraA02t06621Z Brassica rapa HOM05D007751 ORTHO05D009813 4.8e-07 58.9 140 33.6
Gorai.009G255500 Gossypium raimondii HOM05D007679 ORTHO05D009560 4.8e-07 58.9 163 31.3
Duzib041G0061 Durio zibethinus HOM05D007679 ORTHO05D009560 6.3e-07 58.5 159 30.8
MD10G1032400 Malus domestica HOM05D004894 ORTHO05D005689 6.3e-07 58.5 136 30.1
Glyma.10G223000 Glycine max HOM05D004894 ORTHO05D005689 8.2e-07 58.2 157 31.2
Sp6g11920 Schrenkiella parvula HOM05D007751 ORTHO05D009813 8.2e-07 58.2 111 36.9
Duzib093G1264 Durio zibethinus HOM05D007679 ORTHO05D009560 1.1e-06 57.8 138 31.9
Gohir.A05G245408 Gossypium hirsutum HOM05D007679 ORTHO05D009560 1.4e-06 57.4 132 31.1
Gorai.009G255600 Gossypium raimondii HOM05D007679 ORTHO05D009560 1.4e-06 57.4 155 30.3
Lalb_Chr03g0035451 Lupinus albus HOM05D004894 ORTHO05D005689 1.4e-06 57.4 150 33.3
C02p25780 Brassica napus HOM05D007751 ORTHO05D009813 1.8e-06 57.0 140 33.6
BolC2t08647H Brassica oleracea HOM05D007751 ORTHO05D009813 1.8e-06 57.0 140 33.6
Gorai.009G255900 Gossypium raimondii HOM05D007679 ORTHO05D009560 1.8e-06 57.0 198 26.3
THA.LOC104800050 Tarenaya hassleriana HOM05D007751 ORTHO05D009813 2.4e-06 56.6 167 30.5
CSS0042410 Camellia sinensis var. sinensis HOM05D007679 ORTHO05D009560 3.1e-06 56.2 146 31.5
Glyma.20G168700 Glycine max HOM05D004894 ORTHO05D005689 3.1e-06 56.2 149 32.9
Glyma.10G140100 Glycine max HOM05D004894 ORTHO05D005689 9.1e-06 54.7 136 31.6
Gohir.A05G245000 Gossypium hirsutum HOM05D007679 ORTHO05D009560 9.1e-06 54.7 128 31.2
Psat7g222760 Pisum sativum HOM05D004894 ORTHO05D005689 9.1e-06 54.7 136 36.0


User provided reference genes

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