Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc49.66 Carica papaya HOM05D003899 ORTHO05D003655 4.6e-43 178.3 161 100.0
Dinv41123 Davidia involucrata HOM05D000043 ORTHO05D002577 2.1e-19 99.8 83 61.4
TAR381G0487 Trochodendron aralioides HOM05D003899 ORTHO05D003655 6.1e-19 98.2 84 56.0
Dinv25809 Davidia involucrata HOM05D003899 ORTHO05D003655 1.5e-17 93.6 73 63.0
Cfa018365 Carpinus fangiana HOM05D003899 ORTHO05D003655 7.4e-17 91.3 86 54.7
Haze_17704 Corylus avellana HOM05D003899 ORTHO05D003655 1.3e-16 90.5 86 54.7
Nn1g06205 Nelumbo nucifera HOM05D003899 ORTHO05D003655 2.4e-15 86.3 84 50.0
Nn5g28622 Nelumbo nucifera HOM05D003899 ORTHO05D003655 3.1e-15 85.9 82 47.6
Dinv24330 Davidia involucrata HOM05D003899 ORTHO05D003655 4.1e-15 85.5 85 50.6
CiPaw.16G017800 Carya illinoinensis HOM05D003899 ORTHO05D003655 6.9e-15 84.7 88 51.1
MD05G1014900 Malus domestica HOM05D003899 ORTHO05D003655 7.7e-14 81.3 59 66.1
Manes.18G087500 Manihot esculenta HOM05D003899 ORTHO05D003655 1.3e-13 80.5 84 47.6
CiPaw.15G021500 Carya illinoinensis HOM05D003899 ORTHO05D003655 3.8e-13 79.0 83 48.2
QL02p025320 Quercus lobata HOM05D003899 ORTHO05D003655 3.8e-13 79.0 92 45.7
Sabra07G0088500 Salix brachista HOM05D000850 ORTHO05D000266 5.0e-13 78.6 85 49.4
MD10G1014900 Malus domestica HOM05D003899 ORTHO05D003655 6.5e-13 78.2 64 62.5
Potri.005G060700 Populus trichocarpa HOM05D003899 ORTHO05D003655 1.4e-12 77.0 85 47.1
DCAR_007049 Daucus carota HOM05D003899 ORTHO05D003655 1.9e-12 76.6 86 45.3
Dinv03732 Davidia involucrata HOM05D000043 ORTHO05D002577 1.9e-12 76.6 88 45.5
Lj2C604T4 Lonicera japonica HOM05D003899 ORTHO05D003655 1.9e-12 76.6 82 50.0
DCAR_001362 Daucus carota HOM05D003899 ORTHO05D003655 3.2e-12 75.9 86 45.3
Duzib093G0910 Durio zibethinus HOM05D003899 ORTHO05D003655 4.2e-12 75.5 88 44.3
Potri.007G108100 Populus trichocarpa HOM05D003899 ORTHO05D003655 4.2e-12 75.5 85 45.9
QL02p025328 Quercus lobata HOM05D003899 ORTHO05D003655 4.2e-12 75.5 90 44.4
Prupe.8G018800 Prunus persica HOM05D003899 ORTHO05D003655 5.5e-12 75.1 64 59.4
CANSAT25G0207 Cannabis sativa HOM05D003899 ORTHO05D003655 7.2e-12 74.7 88 51.1
Thecc.01G128000 Theobroma cacao HOM05D003899 ORTHO05D003655 7.2e-12 74.7 86 44.2
Aqoxy3G00817 Aquilegia oxysepala HOM05D003899 ORTHO05D003655 1.6e-11 73.6 89 40.4
MBI06_g43012_MAGBIO Magnolia biondii HOM05D003899 ORTHO05D003655 1.6e-11 73.6 82 46.3
Lj2C604T3 Lonicera japonica HOM05D003899 ORTHO05D003655 2.1e-11 73.2 84 46.4
Ca_12820_v3 Cicer arietinum L. HOM05D003899 ORTHO05D003655 2.7e-11 72.8 91 50.5
Gorai.005G081600 Gossypium raimondii HOM05D003899 ORTHO05D003655 2.7e-11 72.8 90 48.9
Aqoxy5G02188 Aquilegia oxysepala HOM05D003899 ORTHO05D003655 4.7e-11 72.0 97 41.2
Oeu030532.1 Olea europaea HOM05D003899 ORTHO05D003655 4.7e-11 72.0 80 45.0
CSS0000461 Camellia sinensis var. sinensis HOM05D003899 ORTHO05D003655 8.0e-11 71.2 72 52.8
Rhsim10G0136200 Rhododendron simsii HOM05D003899 ORTHO05D003655 8.0e-11 71.2 90 40.0
RhsimUnG0132700 Rhododendron simsii HOM05D003899 ORTHO05D003655 8.0e-11 71.2 90 40.0
Sed0026893 Sechium edule HOM05D003899 ORTHO05D003655 8.0e-11 71.2 90 51.1
Actinidia06640 Actinidia chinensis HOM05D003899 ORTHO05D003655 1.4e-10 70.5 85 40.0
Gohir.D02G072400 Gossypium hirsutum HOM05D003899 ORTHO05D003655 1.4e-10 70.5 89 48.3
ClCG08G006450 Citrullus lanatus HOM05D000058 ORTHO05D000077 1.8e-10 70.1 86 46.5
COL.COLO4_08943 Corchorus olitorius HOM05D003899 ORTHO05D003655 2.3e-10 69.7 96 46.9
Gohir.A02G066500 Gossypium hirsutum HOM05D003899 ORTHO05D003655 2.3e-10 69.7 89 47.2
Lalb_Chr23g0271351 Lupinus albus HOM05D003899 ORTHO05D003655 2.3e-10 69.7 82 43.9
Medtr1g008620 Medicago truncatula HOM05D003899 ORTHO05D003655 2.3e-10 69.7 67 56.7
Medtr1g008675 Medicago truncatula HOM05D003899 ORTHO05D003655 2.3e-10 69.7 66 57.6
Nn5g28623 Nelumbo nucifera HOM05D003899 ORTHO05D003655 2.3e-10 69.7 80 42.5
Cpa.g.sc42.130 Carica papaya HOM05D003899 ORTHO05D003655 3.0e-10 69.3 85 43.5
Thecc.08G144600 Theobroma cacao HOM05D003899 ORTHO05D003655 3.0e-10 69.3 86 44.2
Psat6g039960 Pisum sativum HOM05D003899 ORTHO05D003655 6.7e-10 68.2 78 48.7
TWI60G1060 Tripterygium wilfordii HOM05D003899 ORTHO05D003655 6.7e-10 68.2 86 45.3
Psat6g033800 Pisum sativum HOM05D003899 ORTHO05D003655 8.8e-10 67.8 64 56.2
COL.COLO4_14024 Corchorus olitorius HOM05D003899 ORTHO05D003655 1.1e-09 67.4 90 41.1
FvH4_2g14670 Fragaria vesca HOM05D003899 ORTHO05D003655 1.5e-09 67.0 48 62.5
FAN24G0119 Fragaria x ananassa HOM05D003899 ORTHO05D003655 1.5e-09 67.0 48 62.5
Phvul.001G052300 Phaseolus vulgaris HOM05D003899 ORTHO05D003655 1.5e-09 67.0 94 37.2
RcHm_v2.0_Chr6g0277141 Rosa chinensis HOM05D003899 ORTHO05D003655 1.5e-09 67.0 49 61.2
CSS0023777 Camellia sinensis var. sinensis HOM05D003899 ORTHO05D003655 2.6e-09 66.2 75 52.0
MELO3C027328.2 Cucumis melo HOM05D003899 ORTHO05D003655 2.6e-09 66.2 85 49.4
Gohir.D11G228940 Gossypium hirsutum HOM05D003899 ORTHO05D003655 2.6e-09 66.2 55 56.4
Lalb_Chr25g0281721 Lupinus albus HOM05D003899 ORTHO05D003655 2.6e-09 66.2 61 55.7
PSO170G2020 Papaver somniferum HOM05D003899 ORTHO05D003655 2.6e-09 66.2 74 39.2
TPR.G12083 Trifolium pratense HOM05D003899 ORTHO05D003655 2.6e-09 66.2 67 53.7
Gohir.A11G224804 Gossypium hirsutum HOM05D003899 ORTHO05D003655 3.3e-09 65.9 55 56.4
Gorai.003G068900 Gossypium raimondii HOM05D003899 ORTHO05D003655 3.3e-09 65.9 55 54.5
FAN20G0153 Fragaria x ananassa HOM05D003899 ORTHO05D003655 4.4e-09 65.5 47 61.7
Manes.12G153900 Manihot esculenta HOM05D003899 ORTHO05D003655 4.4e-09 65.5 86 38.4
Hma1.2p1_0528F.1_g173010 Hydrangea macrophylla HOM05D003899 ORTHO05D003655 5.7e-09 65.1 76 44.7
arahy.Tifrunner.gnm1.ann1.UE47UQ Arachis hypogaea HOM05D003899 ORTHO05D003655 7.4e-09 64.7 80 42.5
Ciclev10003780m.g Citrus clementina HOM05D003899 ORTHO05D003655 7.4e-09 64.7 86 37.2
PSO017G4320 Papaver somniferum HOM05D003899 ORTHO05D003655 7.4e-09 64.7 75 38.7
THA.LOC104806849 Tarenaya hassleriana HOM05D003899 ORTHO05D003655 7.4e-09 64.7 78 46.2
TWI32G0122 Tripterygium wilfordii HOM05D003899 ORTHO05D003655 7.4e-09 64.7 80 45.0
Glyma.14G121800 Glycine max HOM05D003899 ORTHO05D003655 9.7e-09 64.3 61 54.1
Lj1g0026176 Lotus japonicus HOM05D003899 ORTHO05D003655 9.7e-09 64.3 83 44.6
CsaV3_6G030980 Cucumis sativus L. HOM05D003899 ORTHO05D003655 1.3e-08 63.9 85 47.1
Phvul.001G073300 Phaseolus vulgaris HOM05D003899 ORTHO05D003655 1.3e-08 63.9 58 50.0
TWI79G1413 Tripterygium wilfordii HOM05D003899 ORTHO05D003655 1.3e-08 63.9 74 44.6
Glyma.14G122000 Glycine max HOM05D003899 ORTHO05D003655 1.7e-08 63.5 59 54.2
Medtr1g029140 Medicago truncatula HOM05D003899 ORTHO05D003655 2.2e-08 63.2 58 51.7
Psat6g033720 Pisum sativum HOM05D003899 ORTHO05D003655 2.8e-08 62.8 64 54.7
Duzib041G0166 Durio zibethinus HOM05D003899 ORTHO05D003655 6.3e-08 61.6 87 40.2
Nitab4.5_0001140g0230 Nicotiana tabacum HOM05D003899 ORTHO05D003655 6.3e-08 61.6 85 36.5
Migut.N03236 Erythranthe guttata HOM05D003899 ORTHO05D003655 8.2e-08 61.2 77 46.8
FAN15G3500 Fragaria x ananassa HOM05D003899 ORTHO05D003655 8.2e-08 61.2 47 59.6
TPR.G33315 Trifolium pratense HOM05D003899 ORTHO05D003655 1.1e-07 60.8 87 41.4
THA.LOC104800071 Tarenaya hassleriana HOM05D003899 ORTHO05D003655 1.8e-07 60.1 85 41.2
Thhalv10012331m.g Eutrema salsugineum HOM05D003899 ORTHO05D003655 2.4e-07 59.7 50 54.0
Atru.chr4.839 Acer truncatum HOM05D003899 ORTHO05D003655 4.1e-07 58.9 87 39.1
BcaB07g33974 Brassica carinata HOM05D003899 ORTHO05D003655 4.1e-07 58.9 50 52.0
CANSAT11G1227 Cannabis sativa HOM05D003899 ORTHO05D003655 7.0e-07 58.2 78 34.6
ECA246G5022 Erigeron canadensis HOM05D003899 ORTHO05D003655 9.1e-07 57.8 58 44.8
Nitab4.5_0008388g0020 Nicotiana tabacum HOM05D003899 ORTHO05D003655 9.1e-07 57.8 85 35.3
Sc02g0004420 Simmondsia chinensis HOM05D003899 ORTHO05D003655 9.1e-07 57.8 60 43.3
AUR62017911 Chenopodium quinoa HOM05D003899 ORTHO05D003655 1.2e-06 57.4 84 35.7
AUR62043709 Chenopodium quinoa HOM05D003899 ORTHO05D003655 1.2e-06 57.4 84 35.7
Nitab4.5_0002974g0030 Nicotiana tabacum HOM05D003899 ORTHO05D003655 1.2e-06 57.4 77 44.2
Atru.chr13.1710 Acer truncatum HOM05D003899 ORTHO05D003655 1.6e-06 57.0 89 40.4
BcaB03g16849 Brassica carinata HOM05D003899 ORTHO05D003655 1.6e-06 57.0 86 38.4
BcaC08g42822 Brassica carinata HOM05D003899 ORTHO05D003655 1.6e-06 57.0 50 50.0
A10p07750 Brassica napus HOM05D003899 ORTHO05D003655 1.6e-06 57.0 50 50.0
C06p00330 Brassica napus HOM05D003899 ORTHO05D003655 1.6e-06 57.0 50 50.0
BolC6t35162H Brassica oleracea HOM05D003899 ORTHO05D003655 1.6e-06 57.0 50 50.0
BraSC36t46027Z Brassica rapa HOM05D003899 ORTHO05D003655 1.6e-06 57.0 50 50.0
Lsat_1_v5_gn_9_107661 Lactuca sativa HOM05D003899 ORTHO05D003655 1.6e-06 57.0 58 48.3
Actinidia15159 Actinidia chinensis HOM05D000043 ORTHO05D002577 2.0e-06 56.6 46 65.2
ECA238G1798 Erigeron canadensis HOM05D003899 ORTHO05D003655 2.0e-06 56.6 88 39.8
Lsat_1_v5_gn_5_108760 Lactuca sativa HOM05D003899 ORTHO05D003655 2.0e-06 56.6 58 48.3
HanXRQChr04g0125201 Helianthus annuus HOM05D003899 ORTHO05D003655 2.6e-06 56.2 83 39.8
QL06p029227 Quercus lobata HOM05D003899 ORTHO05D003655 2.6e-06 56.2 85 38.8
MSTRG.1375 Avicennia marina HOM05D003899 ORTHO05D003655 3.5e-06 55.8 88 37.5
C07p00500 Brassica napus HOM05D003899 ORTHO05D003655 3.5e-06 55.8 85 37.6
Duzib264G1053 Durio zibethinus HOM05D003899 ORTHO05D003655 5.9e-06 55.1 81 37.0
Nn1g06203 Nelumbo nucifera HOM05D003899 ORTHO05D003655 5.9e-06 55.1 52 51.9
Ah.05g167520 Amaranthus hybridus HOM05D000219 ORTHO05D000226 7.7e-06 54.7 79 39.2
Sp1g41920 Schrenkiella parvula HOM05D003899 ORTHO05D003655 7.7e-06 54.7 82 36.6


User provided reference genes

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