Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc49.40 Carica papaya HOM05D004540 ORTHO05D004852 1.2e-30 136.0 71 100.0
CiPaw.16G014800 Carya illinoinensis HOM05D004540 ORTHO05D004852 2.1e-08 62.0 67 49.3
Lj5g0026068 Lotus japonicus HOM05D004540 ORTHO05D004852 1.8e-07 58.9 65 47.7
QL02p024551 Quercus lobata HOM05D004540 ORTHO05D004852 4.0e-07 57.8 67 46.3
Manes.18G089800 Manihot esculenta HOM05D004540 ORTHO05D004852 5.2e-07 57.4 71 47.9
Sabra02G0055000 Salix brachista HOM05D004540 ORTHO05D004852 6.8e-07 57.0 67 49.3
Prupe.8G024400 Prunus persica HOM05D004540 ORTHO05D004852 8.9e-07 56.6 72 50.0
CiPaw.15G019000 Carya illinoinensis HOM05D004540 ORTHO05D004852 1.2e-06 56.2 69 47.8
Potri.005G189900 Populus trichocarpa HOM05D004540 ORTHO05D004852 1.2e-06 56.2 70 50.0
Thecc.08G147500 Theobroma cacao HOM05D004540 ORTHO05D004852 1.5e-06 55.8 68 44.1
Hma1.2p1_0483F.1_g162780 Hydrangea macrophylla HOM05D004540 ORTHO05D004852 2.0e-06 55.5 65 50.8
Potri.002G070401 Populus trichocarpa HOM05D004540 ORTHO05D004852 2.6e-06 55.1 65 49.2
Glyma.20G165500 Glycine max HOM05D004540 ORTHO05D004852 3.4e-06 54.7 65 47.7
Glyma.16G170400 Glycine max HOM05D004540 ORTHO05D004852 4.4e-06 54.3 71 45.1
Medtr1g099210 Medicago truncatula HOM05D004540 ORTHO05D004852 4.4e-06 54.3 65 49.2
Phvul.007G078400 Phaseolus vulgaris HOM05D004540 ORTHO05D004852 7.6e-06 53.5 65 47.7
Hma1.2p1_1454F.1_g284340 Hydrangea macrophylla HOM05D004540 ORTHO05D004852 9.9e-06 53.1 65 49.2


User provided reference genes

Program Settings