Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc49.161 Carica papaya HOM05D008230 ORTHO05D010279 4.2e-72 274.6 142 100.0
QL04p038908 Quercus lobata HOM05D008230 ORTHO05D010279 7.2e-24 114.4 149 52.3
CiPaw.14G026100 Carya illinoinensis HOM05D008230 ORTHO05D010279 1.2e-23 113.6 150 52.7
CiPaw.13G032900 Carya illinoinensis HOM05D008230 ORTHO05D010279 2.6e-21 105.9 152 52.0
Cfa011173 Carpinus fangiana HOM05D008230 ORTHO05D010279 4.1e-19 98.6 149 49.0
Medtr4g026350 Medicago truncatula HOM05D008230 ORTHO05D010279 2.9e-17 92.4 153 45.8
Haze_02676 Corylus avellana HOM05D008230 ORTHO05D010279 8.6e-17 90.9 147 44.9
VMungo0331G0239 Vigna mungo HOM05D008230 ORTHO05D010279 5.5e-16 88.2 145 42.8
Thecc.01G382000 Theobroma cacao HOM05D008230 ORTHO05D010279 7.2e-16 87.8 151 46.4
Gohir.D08G157300 Gossypium hirsutum HOM05D008230 ORTHO05D010279 1.2e-15 87.0 154 44.8
Gorai.004G163600 Gossypium raimondii HOM05D008230 ORTHO05D010279 1.6e-15 86.7 154 44.8
Psat7g237760 Pisum sativum HOM05D008230 ORTHO05D010279 1.6e-15 86.7 149 40.3
Manes.05G048600 Manihot esculenta HOM05D008230 ORTHO05D010279 2.8e-15 85.9 149 44.3
Potri.002G144400 Populus trichocarpa HOM05D008230 ORTHO05D010279 2.8e-15 85.9 145 44.8
Gohir.A08G136500 Gossypium hirsutum HOM05D008230 ORTHO05D010279 3.6e-15 85.5 148 43.2
Glyma.03G031600 Glycine max HOM05D008230 ORTHO05D010279 4.7e-15 85.1 145 40.0
Lj3g0026436 Lotus japonicus HOM05D008230 ORTHO05D010279 1.0e-14 84.0 145 40.0
Lalb_Chr03g0039781 Lupinus albus HOM05D008230 ORTHO05D010279 1.0e-14 84.0 145 44.8
Sabra02G0112300 Salix brachista HOM05D008230 ORTHO05D010279 1.0e-14 84.0 146 43.2
TPR.G4997 Trifolium pratense HOM05D008230 ORTHO05D010279 1.8e-14 83.2 144 43.8
Prupe.2G138500 Prunus persica HOM05D008230 ORTHO05D010279 2.3e-14 82.8 156 44.2
Potri.014G060400 Populus trichocarpa HOM05D008230 ORTHO05D010279 5.2e-14 81.6 151 42.4
CANSAT56G1720 Cannabis sativa HOM05D008230 ORTHO05D010279 1.2e-13 80.5 156 42.3
Glyma.01G136600 Glycine max HOM05D008230 ORTHO05D010279 1.2e-13 80.5 146 39.0
arahy.Tifrunner.gnm1.ann1.MFP8ME Arachis hypogaea HOM05D008230 ORTHO05D010279 2.0e-13 79.7 151 41.7
COL.COLO4_12495 Corchorus olitorius HOM05D008230 ORTHO05D010279 3.4e-13 79.0 123 43.9
MD07G1116200 Malus domestica HOM05D008230 ORTHO05D010279 5.7e-13 78.2 163 39.3
Phvul.010G077800 Phaseolus vulgaris HOM05D008230 ORTHO05D010279 5.7e-13 78.2 147 42.2
CANSAT56G2525 Cannabis sativa HOM05D008230 ORTHO05D010279 3.7e-12 75.5 158 39.2
Sabra14G0044300 Salix brachista HOM05D008230 ORTHO05D010279 7.0e-11 71.2 151 38.4
Actinidia12189 Actinidia chinensis HOM05D008230 ORTHO05D010279 1.6e-10 70.1 145 42.1
Dinv44123 Davidia involucrata HOM05D008230 ORTHO05D010279 1.6e-10 70.1 146 38.4
PGR004G0323 Punica granatum HOM05D008230 ORTHO05D010279 2.7e-10 69.3 155 40.6
Lalb_Chr12g0208001 Lupinus albus HOM05D008230 ORTHO05D010279 3.5e-10 68.9 145 40.0
Dinv43677 Davidia involucrata HOM05D008230 ORTHO05D010279 1.7e-09 66.6 146 38.4
Gorai.008G105900 Gossypium raimondii HOM05D008230 ORTHO05D010279 1.5e-08 63.5 149 37.6
FvH4_7g11140 Fragaria vesca HOM05D008230 ORTHO05D010279 2.5e-08 62.8 164 38.4
Gohir.D12G097250 Gossypium hirsutum HOM05D008230 ORTHO05D010279 2.5e-08 62.8 149 37.6
FAN01G0499 Fragaria x ananassa HOM05D008230 ORTHO05D010279 3.3e-08 62.4 164 36.6
Nn6g34001 Nelumbo nucifera HOM05D008230 ORTHO05D010279 4.3e-08 62.0 161 35.4
Atru.chr5.258 Acer truncatum HOM05D008230 ORTHO05D010279 9.5e-08 60.8 127 34.6
SGA_v2.0_scaffold153G36972 Striga asiatica HOM05D008230 ORTHO05D010279 1.6e-07 60.1 53 56.6
FAN03G1067 Fragaria x ananassa HOM05D008230 ORTHO05D010279 2.1e-07 59.7 165 38.2
Hma1.2p1_0041F.1_g025330 Hydrangea macrophylla HOM05D008230 ORTHO05D010279 2.1e-07 59.7 148 37.2
FAN06G3296 Fragaria x ananassa HOM05D008230 ORTHO05D010279 2.8e-07 59.3 166 37.3
FAN10G0483 Fragaria x ananassa HOM05D008230 ORTHO05D010279 2.8e-07 59.3 166 37.3
FAN10G2770 Fragaria x ananassa HOM05D008230 ORTHO05D010279 2.8e-07 59.3 166 37.3
THA.LOC104817222 Tarenaya hassleriana HOM05D010895 ORTHO05D012939 2.8e-07 59.3 146 35.6
FAN03G0682 Fragaria x ananassa HOM05D008230 ORTHO05D010279 3.6e-07 58.9 165 37.0
FAN06G0210 Fragaria x ananassa HOM05D008230 ORTHO05D010279 6.1e-07 58.2 164 35.4
Gohir.A12G094500 Gossypium hirsutum HOM05D008230 ORTHO05D010279 1.4e-06 57.0 143 35.7
Migut.B01599 Erythranthe guttata HOM05D008230 ORTHO05D010279 3.0e-06 55.8 38 68.4
Dinv44126 Davidia involucrata HOM05D008230 ORTHO05D010279 5.2e-06 55.1 143 35.0
ECA236G5072 Erigeron canadensis HOM05D008230 ORTHO05D010279 8.9e-06 54.3 35 74.3
Lalb_Chr07g0190181 Lupinus albus HOM05D008230 ORTHO05D010279 8.9e-06 54.3 42 64.3


User provided reference genes

Program Settings