Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc49.155 Carica papaya HOM05D007090 ORTHO05D008993 2.7e-31 137.9 63 100.0
Potri.014G060700 Populus trichocarpa HOM05D007090 ORTHO05D008993 3.3e-21 104.4 58 72.4
CANSAT56G4322 Cannabis sativa HOM05D007090 ORTHO05D008993 7.4e-21 103.2 58 72.4
CANSAT56G0199 Cannabis sativa HOM05D007090 ORTHO05D008993 9.6e-21 102.8 58 72.4
Prupe.2G138200 Prunus persica HOM05D007090 ORTHO05D008993 9.6e-21 102.8 58 74.1
Cc02_g24410 Coffea canephora HOM05D007090 ORTHO05D008993 1.6e-20 102.1 58 70.7
Eucgr.E01513 Eucalyptus grandis HOM05D007090 ORTHO05D008993 3.7e-20 100.9 58 75.9
Migut.N01613 Erythranthe guttata HOM05D007090 ORTHO05D008993 6.3e-20 100.1 59 69.5
vmacro13441 Vaccinium macrocarpon HOM05D007090 ORTHO05D008993 6.3e-20 100.1 58 72.4
vmacro22435 Vaccinium macrocarpon HOM05D007090 ORTHO05D008993 6.3e-20 100.1 58 72.4
Actinidia22762 Actinidia chinensis HOM05D007090 ORTHO05D008993 8.2e-20 99.8 55 74.5
Actinidia22817 Actinidia chinensis HOM05D007090 ORTHO05D008993 8.2e-20 99.8 55 74.5
Medtr4g026500 Medicago truncatula HOM05D007090 ORTHO05D008993 8.2e-20 99.8 58 69.0
TAR375G0613 Trochodendron aralioides HOM05D007090 ORTHO05D008993 8.2e-20 99.8 58 72.4
COL.COLO4_12490 Corchorus olitorius HOM05D007090 ORTHO05D008993 1.4e-19 99.0 55 70.9
Thecc.01G382600 Theobroma cacao HOM05D007090 ORTHO05D008993 1.8e-19 98.6 55 70.9
arahy.Tifrunner.gnm1.ann1.KQM8V4 Arachis hypogaea HOM05D007090 ORTHO05D008993 2.4e-19 98.2 55 70.9
arahy.Tifrunner.gnm1.ann1.UP4D5N Arachis hypogaea HOM05D007090 ORTHO05D008993 2.4e-19 98.2 55 70.9
Eucgr.E01517 Eucalyptus grandis HOM05D007090 ORTHO05D008993 2.4e-19 98.2 58 72.4
Psat7g236160 Pisum sativum HOM05D007090 ORTHO05D008993 2.4e-19 98.2 58 67.2
Gohir.D11G083500 Gossypium hirsutum HOM05D007090 ORTHO05D008993 3.1e-19 97.8 55 69.1
Sc26g0001310 Simmondsia chinensis HOM05D007090 ORTHO05D008993 4.1e-19 97.4 58 74.1
SGA_v2.0_scaffold11G05536 Striga asiatica HOM05D007090 ORTHO05D008993 4.1e-19 97.4 55 69.1
VMungo0331G0297 Vigna mungo HOM05D007090 ORTHO05D008993 4.1e-19 97.4 58 67.2
Phvul.010G072500 Phaseolus vulgaris HOM05D007090 ORTHO05D008993 6.9e-19 96.7 58 69.0
Dinv44119 Davidia involucrata HOM05D007090 ORTHO05D008993 1.2e-18 95.9 55 70.9
CiPaw.13G032600 Carya illinoinensis HOM05D007090 ORTHO05D008993 1.5e-18 95.5 58 67.2
Haze_02682 Corylus avellana HOM05D007090 ORTHO05D008993 1.5e-18 95.5 55 69.1
PGR042G2604 Punica granatum HOM05D007090 ORTHO05D008993 1.5e-18 95.5 55 69.1
Ca_19835_v3 Cicer arietinum L. HOM05D007090 ORTHO05D008993 2.0e-18 95.1 58 65.5
Manes.05G048800 Manihot esculenta HOM05D007090 ORTHO05D008993 2.0e-18 95.1 58 67.2
PSO782G4184 Papaver somniferum HOM05D007090 ORTHO05D008993 2.0e-18 95.1 58 67.2
TPR.G4946 Trifolium pratense HOM05D007090 ORTHO05D008993 2.6e-18 94.7 58 67.2
Glyma.03G032000 Glycine max HOM05D007090 ORTHO05D008993 3.4e-18 94.4 58 67.2
Lalb_Chr12g0207911 Lupinus albus HOM05D007090 ORTHO05D008993 3.4e-18 94.4 59 66.1
QL04p038719 Quercus lobata HOM05D007090 ORTHO05D008993 3.4e-18 94.4 58 67.2
THA.LOC104803743 Tarenaya hassleriana HOM05D007090 ORTHO05D008993 3.4e-18 94.4 58 69.0
Lj3g0011300 Lotus japonicus HOM05D007090 ORTHO05D008993 4.5e-18 94.0 54 68.5
Lsat_1_v5_gn_4_45521 Lactuca sativa HOM05D007090 ORTHO05D008993 5.9e-18 93.6 58 65.5
Ah.08g212650 Amaranthus hybridus HOM05D007090 ORTHO05D008993 7.6e-18 93.2 55 72.7
FAN03G3027 Fragaria x ananassa HOM05D007090 ORTHO05D008993 7.6e-18 93.2 58 67.2
MD02G1210400 Malus domestica HOM05D007090 ORTHO05D008993 7.6e-18 93.2 58 65.5
SalBow5G5305 Salvia bowleyana HOM05D007090 ORTHO05D008993 7.6e-18 93.2 59 62.7
Sp6g00210 Schrenkiella parvula HOM05D007090 ORTHO05D008993 7.6e-18 93.2 58 72.4
Hund17045 Selenicereus undatus HOM05D007090 ORTHO05D008993 7.6e-18 93.2 55 70.9
MSTRG.4910 Avicennia marina HOM05D007090 ORTHO05D008993 1.0e-17 92.8 55 63.6
Peaxi162Scf00803g00118 Petunia axillaris HOM05D007090 ORTHO05D008993 1.0e-17 92.8 55 63.6
Thhalv10028898m.g Eutrema salsugineum HOM05D007090 ORTHO05D008993 1.7e-17 92.0 58 70.7
PSO063G1752 Papaver somniferum HOM05D007090 ORTHO05D008993 1.7e-17 92.0 58 65.5
RcHm_v2.0_Chr1g0349121 Rosa chinensis HOM05D007090 ORTHO05D008993 1.7e-17 92.0 58 65.5
GSVIVG01027682001 Vitis vinifera HOM05D007090 ORTHO05D008993 1.7e-17 92.0 49 77.6
Oeu051923.2 Olea europaea HOM05D007090 ORTHO05D008993 2.2e-17 91.7 58 63.8
AL6G53360 Arabidopsis lyrata HOM05D007090 ORTHO05D008993 2.9e-17 91.3 58 69.0
FAN10G4025 Fragaria x ananassa HOM05D007090 ORTHO05D008993 2.9e-17 91.3 58 65.5
Ciclev10021511m.g Citrus clementina HOM05D007090 ORTHO05D008993 3.8e-17 90.9 55 61.8
FvH4_7g11100 Fragaria vesca HOM05D007090 ORTHO05D008993 3.8e-17 90.9 58 65.5
Carub.0006s3709 Capsella rubella HOM05D007090 ORTHO05D008993 5.0e-17 90.5 58 69.0
HanXRQChr03g0088131 Helianthus annuus HOM05D007090 ORTHO05D008993 6.5e-17 90.1 58 63.8
Nitab4.5_0000859g0240 Nicotiana tabacum HOM05D007090 ORTHO05D008993 6.5e-17 90.1 58 62.1
EL10Ac1g00840 Beta vulgaris HOM05D007090 ORTHO05D008993 8.5e-17 89.7 55 69.1
Aqoxy5G03901 Aquilegia oxysepala HOM05D007090 ORTHO05D008993 1.1e-16 89.4 55 63.6
Atru.chr5.252 Acer truncatum HOM05D007090 ORTHO05D008993 1.4e-16 89.0 55 65.5
Aa31LG5G170 Aethionema arabicum HOM05D007090 ORTHO05D008993 1.4e-16 89.0 58 69.0
CARHR248180 Cardamine hirsuta HOM05D007090 ORTHO05D008993 1.4e-16 89.0 58 67.2
Rhsim07G0031100 Rhododendron simsii HOM05D007090 ORTHO05D008993 1.9e-16 88.6 48 75.0
unitig_748.g7116 Utricularia gibba HOM05D007090 ORTHO05D008993 2.5e-16 88.2 58 60.3
AT1G73440 Arabidopsis thaliana HOM05D007090 ORTHO05D008993 3.2e-16 87.8 58 67.2
CsaV3_6G008990 Cucumis sativus L. HOM05D007090 ORTHO05D008993 3.2e-16 87.8 55 69.1
ATR0317G013 Amborella trichopoda HOM05D007090 ORTHO05D008993 5.5e-16 87.0 59 62.7
DCAR_015886 Daucus carota HOM05D007090 ORTHO05D008993 7.2e-16 86.7 55 61.8
Gorai.007G089100 Gossypium raimondii HOM05D007090 ORTHO05D008993 7.2e-16 86.7 48 68.8
ClCG06G002820 Citrullus lanatus HOM05D007090 ORTHO05D008993 1.2e-15 85.9 55 67.3
Sabra14G0044500 Salix brachista HOM05D007090 ORTHO05D008993 1.2e-15 85.9 48 70.8
ECA234G0545 Erigeron canadensis HOM05D007090 ORTHO05D008993 1.6e-15 85.5 58 62.1
BcaB01g02215 Brassica carinata HOM05D007090 ORTHO05D008993 2.1e-15 85.1 58 62.1
BcaC04g24200 Brassica carinata HOM05D007090 ORTHO05D008993 2.1e-15 85.1 58 62.1
BolC9t52948H Brassica oleracea HOM05D007090 ORTHO05D008993 2.1e-15 85.1 58 62.1
Duzib138G0673 Durio zibethinus HOM05D007090 ORTHO05D008993 2.1e-15 85.1 46 71.7
Sopen01g036660 Solanum pennellii HOM05D007090 ORTHO05D008993 3.6e-15 84.3 49 65.3
FAN10G1641 Fragaria x ananassa HOM05D007090 ORTHO05D008993 4.6e-15 84.0 66 57.6
A09p00730 Brassica napus HOM05D007090 ORTHO05D008993 6.1e-15 83.6 58 62.1
C09p00130 Brassica napus HOM05D007090 ORTHO05D008993 6.1e-15 83.6 58 62.1
BraA09t35687Z Brassica rapa HOM05D007090 ORTHO05D008993 6.1e-15 83.6 58 62.1
FAN06G0781 Fragaria x ananassa HOM05D007090 ORTHO05D008993 6.1e-15 83.6 66 57.6
FAN06G2008 Fragaria x ananassa HOM05D007090 ORTHO05D008993 6.1e-15 83.6 66 57.6
PGSC0003DMG400025974 Solanum tuberosum HOM05D007090 ORTHO05D008993 1.0e-14 82.8 48 66.7
CSS0011917 Camellia sinensis var. sinensis HOM05D007090 ORTHO05D008993 2.3e-14 81.6 86 46.5
Solyc01g090920.3 Solanum lycopersicum HOM05D007090 ORTHO05D008993 2.3e-14 81.6 48 64.6
CAN.G1469.17 Capsicum annuum HOM05D007090 ORTHO05D008993 6.7e-14 80.1 48 62.5
Nitab4.5_0008963g0010 Nicotiana tabacum HOM05D007090 ORTHO05D008993 6.7e-14 80.1 48 62.5
CDE04G3442 Ceratophyllum demersum HOM05D007090 ORTHO05D008993 4.3e-13 77.4 46 69.6
Nn1g01037 Nelumbo nucifera HOM05D007090 ORTHO05D008993 5.7e-13 77.0 46 63.0
FAN01G0616 Fragaria x ananassa HOM05D007090 ORTHO05D008993 9.7e-13 76.3 86 44.2
Os04g0534300 Oryza sativa ssp. japonica HOM05D007090 ORTHO05D008993 1.3e-12 75.9 55 56.4
CSS0004451 Camellia sinensis var. sinensis HOM05D007090 ORTHO05D008993 1.1e-11 72.8 38 76.3
MELO3C022245.2 Cucumis melo HOM05D007090 ORTHO05D008993 5.3e-11 70.5 46 65.2
Sed0010456 Sechium edule HOM05D007090 ORTHO05D008993 6.9e-11 70.1 46 63.0
Hma1.2p1_0005F.1_g004490 Hydrangea macrophylla HOM05D007090 ORTHO05D008993 9.1e-11 69.7 40 70.0
TWI23G0238 Tripterygium wilfordii HOM05D007090 ORTHO05D008993 6.5e-09 63.5 37 67.6
SEGI_04858 Sequoiadendron giganteum HOM05D007090 ORTHO05D008993 1.1e-08 62.8 40 65.0
CBR_g23736 Chara braunii HOM05D007090 ORTHO05D008993 1.9e-08 62.0 53 45.3
AT4G00140 Arabidopsis thaliana HOM05D007090 ORTHO05D008993 7.2e-08 60.1 41 65.9
Pp3c13_5390 Physcomitrium patens HOM05D007090 ORTHO05D008993 9.4e-08 59.7 55 45.5
ECA234G4391 Erigeron canadensis HOM05D007090 ORTHO05D008993 1.2e-07 59.3 44 56.8
SMO137G0209 Selaginella moellendorffii HOM05D007090 ORTHO05D008993 1.8e-06 55.5 40 57.5


User provided reference genes

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