Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc482.2 Carica papaya HOM05D000711 ORTHO05D034070 6.4e-122 441.0 271 100.0
Sabra09G0053600 Salix brachista HOM05D000711 ORTHO05D000545 5.8e-46 188.7 201 62.7
Haze_23223 Corylus avellana HOM05D000711 ORTHO05D000545 9.5e-41 171.4 273 52.7
Gohir.D08G020200 Gossypium hirsutum HOM05D000711 ORTHO05D000545 4.6e-35 152.5 246 53.7
Gorai.004G014800 Gossypium raimondii HOM05D000711 ORTHO05D000545 6.0e-35 152.1 246 53.7
MELO3C014564.2 Cucumis melo HOM05D000711 ORTHO05D000545 5.2e-31 139.0 254 46.5
COL.COLO4_35679 Corchorus olitorius HOM05D000711 ORTHO05D000545 1.7e-29 134.0 171 62.0
Duzib170G0005 Durio zibethinus HOM05D000711 ORTHO05D000545 1.9e-28 130.6 170 62.4
Gohir.A07G120100 Gossypium hirsutum HOM05D000711 ORTHO05D000545 7.8e-27 125.2 169 58.6
Duzib150G1376 Durio zibethinus HOM05D000711 ORTHO05D000545 2.5e-25 120.2 169 59.2
VMungo0647G0330 Vigna mungo HOM05D000711 ORTHO05D000545 9.5e-25 118.2 254 44.9
CSS0013588 Camellia sinensis var. sinensis HOM05D000711 ORTHO05D000545 2.8e-24 116.7 213 48.8
ClCG02G022900 Citrullus lanatus HOM05D000711 ORTHO05D000545 3.6e-24 116.3 174 51.7
Potri.009G070800 Populus trichocarpa HOM05D000711 ORTHO05D000545 3.6e-24 116.3 123 66.7
CiPaw.13G151400 Carya illinoinensis HOM05D000711 ORTHO05D000545 1.8e-23 114.0 193 53.4
Gohir.D07G124300 Gossypium hirsutum HOM05D000711 ORTHO05D000545 1.7e-21 107.5 169 56.2
Gorai.001G134100 Gossypium raimondii HOM05D000711 ORTHO05D000545 1.7e-21 107.5 169 56.8
CiPaw.14G113700 Carya illinoinensis HOM05D000711 ORTHO05D000545 2.2e-21 107.1 188 42.6
Thecc.09G249500 Theobroma cacao HOM05D000711 ORTHO05D000545 6.4e-21 105.5 102 69.6
Gohir.D09G106400 Gossypium hirsutum HOM05D000711 ORTHO05D000545 1.1e-20 104.8 171 54.4
Rhsim13G0210800 Rhododendron simsii HOM05D000711 ORTHO05D000545 1.4e-20 104.4 264 42.0
Gohir.A09G110000 Gossypium hirsutum HOM05D000711 ORTHO05D000545 3.2e-20 103.2 171 53.8
AL6G23130 Arabidopsis lyrata HOM05D000711 ORTHO05D000545 2.1e-19 100.5 187 46.0
Potri.001G276200 Populus trichocarpa HOM05D000711 ORTHO05D000545 2.1e-19 100.5 116 66.4
CANSAT21G1437 Cannabis sativa HOM05D000711 ORTHO05D000545 2.7e-19 100.1 208 50.0
Atru.chr3.2765 Acer truncatum HOM05D000711 ORTHO05D000545 1.0e-18 98.2 178 53.4
Dinv36173 Davidia involucrata HOM05D000711 ORTHO05D000545 1.3e-18 97.8 130 50.8
Manes.01G179500 Manihot esculenta HOM05D000711 ORTHO05D000545 1.7e-18 97.4 113 63.7
Gohir.D05G074200 Gossypium hirsutum HOM05D000711 ORTHO05D000545 3.0e-18 96.7 169 47.9
Hund21984 Selenicereus undatus HOM05D000711 ORTHO05D000545 3.0e-18 96.7 264 35.6
TAR623G0316 Trochodendron aralioides HOM05D000711 ORTHO05D034070 3.9e-18 96.3 99 60.6
BcaNung01196 Brassica carinata HOM05D000711 ORTHO05D000545 5.1e-18 95.9 206 41.3
BraA02t05126Z Brassica rapa HOM05D000711 ORTHO05D000545 5.1e-18 95.9 195 40.5
Gohir.A05G071300 Gossypium hirsutum HOM05D000711 ORTHO05D000545 5.1e-18 95.9 166 48.2
Gohir.A08G010100 Gossypium hirsutum HOM05D000711 ORTHO05D000545 5.1e-18 95.9 168 53.6
C02p05690 Brassica napus HOM05D000711 ORTHO05D000545 8.7e-18 95.1 206 42.2
TPR.G19361 Trifolium pratense HOM05D000711 ORTHO05D000545 1.9e-17 94.0 195 47.2
Gorai.009G075300 Gossypium raimondii HOM05D000711 ORTHO05D000545 2.5e-17 93.6 167 47.3
CARHR200780 Cardamine hirsuta HOM05D000711 ORTHO05D000545 9.6e-17 91.7 199 42.2
Gorai.006G123900 Gossypium raimondii HOM05D000711 ORTHO05D000545 9.6e-17 91.7 119 58.0
MBI13_g06295_MAGBIO Magnolia biondii HOM05D000711 ORTHO05D000545 2.8e-16 90.1 195 43.6
Sp6g31310 Schrenkiella parvula HOM05D000711 ORTHO05D000545 3.6e-16 89.7 184 44.6
Medtr5g089750 Medicago truncatula HOM05D000711 ORTHO05D000545 4.7e-16 89.4 179 53.1
Ah.06g194520 Amaranthus hybridus HOM05D000711 ORTHO05D000545 6.2e-16 89.0 278 35.3
CsaV3_6G039030 Cucumis sativus L. HOM05D000711 ORTHO05D000545 6.2e-16 89.0 186 41.4
Manes.02G140000 Manihot esculenta HOM05D000711 ORTHO05D000545 6.2e-16 89.0 122 62.3
Lsat_1_v5_gn_3_110380 Lactuca sativa HOM05D000711 ORTHO05D000545 1.4e-15 87.8 195 44.6
Lj1C285T9 Lonicera japonica HOM05D000711 ORTHO05D000545 1.4e-15 87.8 113 58.4
Nn7g36688 Nelumbo nucifera HOM05D000711 ORTHO05D000545 3.1e-15 86.7 123 51.2
Nitab4.5_0001500g0080 Nicotiana tabacum HOM05D000711 ORTHO05D000545 3.1e-15 86.7 215 44.7
Dinv38627 Davidia involucrata HOM05D000711 ORTHO05D034070 4.0e-15 86.3 92 57.6
Eucgr.J00697 Eucalyptus grandis HOM05D000711 ORTHO05D000545 1.2e-14 84.7 127 48.8
Aa31LG3G14900 Aethionema arabicum HOM05D000711 ORTHO05D000545 2.6e-14 83.6 194 39.7
Nitab4.5_0000730g0050 Nicotiana tabacum HOM05D000711 ORTHO05D000545 3.4e-14 83.2 211 42.7
CAN.G96.12 Capsicum annuum HOM05D000711 ORTHO05D000545 7.6e-14 82.0 261 38.3
vmacro04024 Vaccinium macrocarpon HOM05D000711 ORTHO05D000545 7.6e-14 82.0 105 53.3
ECA238G1262 Erigeron canadensis HOM05D000711 ORTHO05D000545 2.9e-13 80.1 202 46.5
TAR369G0644 Trochodendron aralioides HOM05D000711 ORTHO05D000545 3.8e-13 79.7 182 42.9
VMungo0540G0402 Vigna mungo HOM05D000711 ORTHO05D000545 6.4e-13 79.0 180 43.9
HPP92_025146 Vanilla planifolia HOM05D000711 ORTHO05D000545 4.2e-12 76.3 231 36.8
CDE11G0414 Ceratophyllum demersum HOM05D000711 ORTHO05D000545 6.0e-11 72.4 170 41.2
BcaNung03624 Brassica carinata HOM05D000711 ORTHO05D000545 7.8e-11 72.0 175 42.3
MSTRG.12442 Avicennia marina HOM05D000711 ORTHO05D000545 2.3e-10 70.5 189 34.9
Phvul.008G200700 Phaseolus vulgaris HOM05D000711 ORTHO05D000545 3.9e-10 69.7 184 37.5
RcHm_v2.0_Chr5g0050641 Rosa chinensis HOM05D000711 ORTHO05D000545 3.9e-10 69.7 103 53.4
GSVIVG01037267001 Vitis vinifera HOM05D000711 ORTHO05D000545 3.9e-10 69.7 173 37.0
EL10Ac4g10149 Beta vulgaris HOM05D000711 ORTHO05D000545 1.1e-09 68.2 218 40.8
Hma1.2p1_0129F.1_g060135 Hydrangea macrophylla HOM05D000711 ORTHO05D000545 1.5e-09 67.8 98 52.0
Glyma.14G034800 Glycine max HOM05D000711 ORTHO05D000545 5.6e-09 65.9 188 35.6
MBI13_g24920_MAGBIO Magnolia biondii HOM05D000711 ORTHO05D000545 5.6e-09 65.9 143 46.2
Actinidia16377 Actinidia chinensis HOM05D000711 ORTHO05D000545 7.3e-09 65.5 184 32.1
Glyma.02G280000 Glycine max HOM05D000711 ORTHO05D000545 1.3e-08 64.7 187 35.8
Hma1.2p1_2742F.1_g327760 Hydrangea macrophylla HOM05D000711 ORTHO05D000545 2.1e-08 63.9 95 50.5
Lsat_1_v5_gn_2_33180 Lactuca sativa HOM05D000711 ORTHO05D000545 2.1e-08 63.9 194 34.0
MD03G1166900 Malus domestica HOM05D000711 ORTHO05D000545 3.6e-08 63.2 103 46.6
Actinidia06959 Actinidia chinensis HOM05D000711 ORTHO05D000545 4.8e-08 62.8 119 48.7
THA.LOC104799121 Tarenaya hassleriana HOM05D000711 ORTHO05D000545 8.1e-08 62.0 176 42.0
PGSC0003DMG400009453 Solanum tuberosum HOM05D000711 ORTHO05D000545 2.4e-07 60.5 162 37.0
Ca_06216_v3 Cicer arietinum L. HOM05D000711 ORTHO05D000545 5.3e-07 59.3 162 38.9
Sc09g0001000 Simmondsia chinensis HOM05D000711 ORTHO05D000545 9.0e-07 58.5 118 46.6
A02p01470 Brassica napus HOM05D000711 ORTHO05D000545 1.2e-06 58.2 123 39.8
Oeu061710.1 Olea europaea HOM05D000711 ORTHO05D000545 1.2e-06 58.2 147 44.2
MD11G1186100 Malus domestica HOM05D000711 ORTHO05D000545 1.5e-06 57.8 103 54.4
ECA240G1698 Erigeron canadensis HOM05D000711 ORTHO05D000545 2.0e-06 57.4 164 31.1
Prupe.4G267200 Prunus persica HOM05D000711 ORTHO05D000545 2.0e-06 57.4 228 34.6
arahy.Tifrunner.gnm1.ann1.H1I1DS Arachis hypogaea HOM05D000711 ORTHO05D000545 3.4e-06 56.6 192 41.7
FAN25G1319 Fragaria x ananassa HOM05D000711 ORTHO05D000545 3.4e-06 56.6 183 32.8
Lalb_Chr04g0249201 Lupinus albus HOM05D000711 ORTHO05D000545 3.4e-06 56.6 116 43.1
arahy.Tifrunner.gnm1.ann1.0RI6JJ Arachis hypogaea HOM05D000711 ORTHO05D000545 5.8e-06 55.8 192 41.1


User provided reference genes

Program Settings