Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc48.95 Carica papaya HOM05D006406 ORTHO05D007883 7.4e-192 673.7 340 100.0
Manes.08G117600 Manihot esculenta HOM05D006406 ORTHO05D007883 9.5e-139 497.3 344 69.5
Thecc.05G312900 Theobroma cacao HOM05D006406 ORTHO05D007883 5.2e-137 491.5 345 71.9
Duzib177G0190 Durio zibethinus HOM05D006406 ORTHO05D007883 2.0e-136 489.6 345 71.0
Haze_04140 Corylus avellana HOM05D006406 ORTHO05D007883 2.9e-135 485.7 348 69.5
COL.COLO4_10518 Corchorus olitorius HOM05D006406 ORTHO05D007883 4.9e-135 485.0 345 73.6
Sabra13G0015900 Salix brachista HOM05D006406 ORTHO05D007883 2.0e-133 479.6 355 67.3
Cfa006628 Carpinus fangiana HOM05D006406 ORTHO05D007883 2.7e-133 479.2 346 69.7
Potri.013G017100 Populus trichocarpa HOM05D006406 ORTHO05D007883 2.7e-133 479.2 357 67.8
Sabra13G0020100 Salix brachista HOM05D006406 ORTHO05D007883 7.8e-133 477.6 355 67.0
QL03p020986 Quercus lobata HOM05D006406 ORTHO05D007883 2.3e-132 476.1 348 68.7
CiPaw.08G161900 Carya illinoinensis HOM05D006406 ORTHO05D007883 3.0e-132 475.7 347 68.3
Gohir.A13G109200 Gossypium hirsutum HOM05D006406 ORTHO05D007883 6.6e-132 474.6 345 67.5
Ciclev10001711m.g Citrus clementina HOM05D006406 ORTHO05D007883 8.6e-132 474.2 353 68.0
Gorai.013G125700 Gossypium raimondii HOM05D006406 ORTHO05D007883 2.5e-131 472.6 345 67.5
RcHm_v2.0_Chr3g0455711 Rosa chinensis HOM05D006406 ORTHO05D007883 7.3e-131 471.1 345 71.6
Atru.chr2.29 Acer truncatum HOM05D006406 ORTHO05D007883 1.2e-130 470.3 336 72.0
QL03p021882 Quercus lobata HOM05D006406 ORTHO05D007883 3.6e-130 468.8 307 73.0
Glyma.03G235700 Glycine max HOM05D006406 ORTHO05D007883 2.3e-129 466.1 351 67.8
PGR083G2713 Punica granatum HOM05D006406 ORTHO05D007883 1.5e-128 463.4 296 75.3
Phvul.006G089700 Phaseolus vulgaris HOM05D006406 ORTHO05D007883 1.3e-127 460.3 347 66.9
Gohir.D13G112000 Gossypium hirsutum HOM05D006406 ORTHO05D007883 1.9e-126 456.4 297 73.1
GSVIVG01031144001 Vitis vinifera HOM05D006406 ORTHO05D007883 3.2e-126 455.7 345 65.5
Medtr7g112650 Medicago truncatula HOM05D006406 ORTHO05D007883 5.4e-126 454.9 340 65.6
TPR.G33225 Trifolium pratense HOM05D006406 ORTHO05D007883 1.6e-125 453.4 328 66.8
Lj1g0022852 Lotus japonicus HOM05D006406 ORTHO05D007883 6.0e-125 451.4 341 65.1
Ca_05800_v3 Cicer arietinum L. HOM05D006406 ORTHO05D007883 7.8e-125 451.1 332 66.6
Carub.0006s2486 Capsella rubella HOM05D006406 ORTHO05D007883 1.0e-124 450.7 347 64.0
Eucgr.B01914 Eucalyptus grandis HOM05D006406 ORTHO05D007883 1.0e-124 450.7 366 64.2
TAR633G0157 Trochodendron aralioides HOM05D006406 ORTHO05D007883 1.0e-124 450.7 356 62.6
VMungo0540G0116 Vigna mungo HOM05D006406 ORTHO05D007883 3.9e-124 448.7 352 63.9
Hund07096 Selenicereus undatus HOM05D006406 ORTHO05D007883 2.5e-123 446.0 335 65.7
Thhalv10005730m.g Eutrema salsugineum HOM05D006406 ORTHO05D007883 4.3e-123 445.3 349 63.9
Hma1.2p1_1212F.1_g267260 Hydrangea macrophylla HOM05D006406 ORTHO05D007883 4.3e-123 445.3 342 64.6
TWI12G0288 Tripterygium wilfordii HOM05D006406 ORTHO05D007883 5.6e-123 444.9 340 65.3
Lalb_Chr18g0045761 Lupinus albus HOM05D006406 ORTHO05D007883 7.3e-123 444.5 345 64.9
MD04G1200800 Malus domestica HOM05D006406 ORTHO05D007883 7.3e-123 444.5 346 66.5
THA.LOC104818716 Tarenaya hassleriana HOM05D006406 ORTHO05D007883 9.5e-123 444.1 349 64.8
AT5G27710 Arabidopsis thaliana HOM05D006406 ORTHO05D007883 2.1e-122 443.0 349 63.6
AL6G39250 Arabidopsis lyrata HOM05D006406 ORTHO05D007883 3.6e-122 442.2 350 62.9
arahy.Tifrunner.gnm1.ann1.Q6XDLT Arachis hypogaea HOM05D006406 ORTHO05D007883 6.2e-122 441.4 340 62.9
CsaV3_1G038840 Cucumis sativus L. HOM05D006406 ORTHO05D007883 6.2e-122 441.4 342 62.3
ClCG03G017120 Citrullus lanatus HOM05D006406 ORTHO05D007883 8.1e-122 441.0 342 63.5
arahy.Tifrunner.gnm1.ann1.PP7FUY Arachis hypogaea HOM05D006406 ORTHO05D007883 1.8e-121 439.9 340 62.6
Sp2g20880 Schrenkiella parvula HOM05D006406 ORTHO05D007883 1.8e-121 439.9 347 64.0
Aqoxy5G00730 Aquilegia oxysepala HOM05D006406 ORTHO05D007883 1.2e-120 437.2 308 66.6
Rhsim07G0188300 Rhododendron simsii HOM05D006406 ORTHO05D007883 1.2e-120 437.2 297 69.7
Actinidia35561 Actinidia chinensis HOM05D006406 ORTHO05D007883 2.0e-120 436.4 350 64.9
Aa31LG11G9460 Aethionema arabicum HOM05D006406 ORTHO05D007883 9.9e-120 434.1 349 62.5
Sc16g0008820 Simmondsia chinensis HOM05D006406 ORTHO05D007883 2.9e-119 432.6 348 61.8
Lj9C146T2 Lonicera japonica HOM05D006406 ORTHO05D007883 6.4e-119 431.4 305 67.5
Psat0s27g0120 Pisum sativum HOM05D006406 ORTHO05D007883 6.4e-119 431.4 309 67.3
Oeu043348.1 Olea europaea HOM05D006406 ORTHO05D007883 8.3e-119 431.0 302 68.2
CANSAT54G1062 Cannabis sativa HOM05D006406 ORTHO05D007883 1.1e-118 430.6 354 62.4
vmacro04816 Vaccinium macrocarpon HOM05D006406 ORTHO05D007883 1.4e-118 430.3 359 60.4
CAN.G1459.10 Capsicum annuum HOM05D006406 ORTHO05D007883 1.9e-118 429.9 307 67.4
Nn4g25830 Nelumbo nucifera HOM05D006406 ORTHO05D007883 2.4e-118 429.5 360 59.7
Nitab4.5_0003658g0090 Nicotiana tabacum HOM05D006406 ORTHO05D007883 3.2e-118 429.1 306 66.3
TWI36G0652 Tripterygium wilfordii HOM05D006406 ORTHO05D007883 3.2e-118 429.1 343 62.1
FAN14G3705 Fragaria x ananassa HOM05D006406 ORTHO05D007883 2.7e-117 426.0 316 69.0
SalBow7G2778 Salvia bowleyana HOM05D006406 ORTHO05D007883 2.7e-117 426.0 291 68.4
Sed0006495 Sechium edule HOM05D006406 ORTHO05D007883 2.7e-117 426.0 347 62.0
Peaxi162Scf00037g01125 Petunia axillaris HOM05D006406 ORTHO05D007883 3.5e-117 425.6 334 63.2
Hund07097 Selenicereus undatus HOM05D006406 ORTHO05D007883 3.5e-117 425.6 290 69.0
Sopen01g043220 Solanum pennellii HOM05D006406 ORTHO05D007883 7.8e-117 424.5 298 67.1
EL10Ac4g09916 Beta vulgaris HOM05D006406 ORTHO05D007883 1.0e-116 424.1 293 68.3
A09p05410 Brassica napus HOM05D006406 ORTHO05D007883 2.3e-116 422.9 350 62.6
BraA09t36179Z Brassica rapa HOM05D006406 ORTHO05D007883 3.0e-116 422.5 350 62.6
Prupe.6G320900 Prunus persica HOM05D006406 ORTHO05D007883 3.0e-116 422.5 323 67.5
Solyc01g099700.3 Solanum lycopersicum HOM05D006406 ORTHO05D007883 1.1e-115 420.6 298 65.4
Nitab4.5_0003844g0020 Nicotiana tabacum HOM05D006406 ORTHO05D007883 3.6e-114 415.6 294 67.7
PGSC0003DMG400007542 Solanum tuberosum HOM05D006406 ORTHO05D007883 1.1e-113 414.1 292 66.1
BcaB04g19684 Brassica carinata HOM05D006406 ORTHO05D007883 2.6e-112 409.5 354 59.9
MBI18_g46420_MAGBIO Magnolia biondii HOM05D006406 ORTHO05D007883 2.6e-112 409.5 295 64.7
SGA_v2.0_scaffold172G38986 Striga asiatica HOM05D006406 ORTHO05D007883 3.4e-112 409.1 342 61.4
BcaC04g23642 Brassica carinata HOM05D006406 ORTHO05D007883 1.7e-111 406.8 354 60.2
C09p05890 Brassica napus HOM05D006406 ORTHO05D007883 1.4e-110 403.7 355 60.3
BolC9t53515H Brassica oleracea HOM05D006406 ORTHO05D007883 1.4e-110 403.7 355 60.3
FAN05G5419 Fragaria x ananassa HOM05D006406 ORTHO05D007883 2.4e-110 402.9 309 67.3
PSO210G1514 Papaver somniferum HOM05D006406 ORTHO05D007883 2.1e-109 399.8 348 58.0
ECA236G2290 Erigeron canadensis HOM05D006406 ORTHO05D007883 3.5e-109 399.1 282 68.1
PSO210G1688 Papaver somniferum HOM05D006406 ORTHO05D007883 7.8e-109 397.9 351 57.8
CARHR186230 Cardamine hirsuta HOM05D006406 ORTHO05D007883 1.3e-108 397.1 317 62.8
unitig_52.g17112 Utricularia gibba HOM05D006406 ORTHO05D007883 2.3e-108 396.4 305 64.3
Migut.N01744 Erythranthe guttata HOM05D006406 ORTHO05D007883 6.6e-108 394.8 292 64.0
AUR62000764 Chenopodium quinoa HOM05D006406 ORTHO05D007883 8.7e-108 394.4 297 63.6
CSS0003718 Camellia sinensis var. sinensis HOM05D006406 ORTHO05D007883 2.5e-107 392.9 341 59.5
Lsat_1_v5_gn_9_88181 Lactuca sativa HOM05D006406 ORTHO05D007883 2.8e-106 389.4 328 60.7
HanXRQChr11g0339311 Helianthus annuus HOM05D006406 ORTHO05D007883 1.1e-102 377.5 313 61.7
Os07g0673000 Oryza sativa ssp. japonica HOM05D006406 ORTHO05D007883 1.0e-100 370.9 264 64.8
CDE11G0411 Ceratophyllum demersum HOM05D001335 ORTHO05D001184 1.3e-100 370.5 303 57.1
AUR62005205 Chenopodium quinoa HOM05D006406 ORTHO05D007883 1.5e-99 367.1 310 59.0
Cc02_g34120 Coffea canephora HOM05D006406 ORTHO05D007883 9.6e-99 364.4 215 77.2
Dinv30810 Davidia involucrata HOM05D006406 ORTHO05D007883 3.6e-98 362.5 244 68.4
Ah.06g189770 Amaranthus hybridus HOM05D006406 ORTHO05D007883 6.2e-98 361.7 264 64.8
ATR0796G153 Amborella trichopoda HOM05D006406 ORTHO05D007883 8.1e-98 361.3 245 67.3
Glyma.19G233500 Glycine max HOM05D006406 ORTHO05D007883 8.1e-98 361.3 259 67.6
DCAR_029393 Daucus carota HOM05D006406 ORTHO05D007883 2.3e-92 343.2 360 51.1
SEGI_05797 Sequoiadendron giganteum HOM05D006406 ORTHO05D007883 2.9e-87 326.2 296 53.0
FvH4_6g06560 Fragaria vesca HOM05D006406 ORTHO05D007883 5.7e-83 312.0 252 64.7
MELO3C015308.2 Cucumis melo HOM05D006406 ORTHO05D007883 9.0e-81 304.7 348 48.3
Pp3c6_26830 Physcomitrium patens HOM05D006406 ORTHO05D007883 1.1e-73 281.2 239 53.1
Mapoly0054s0047 Marchantia polymorpha HOM05D006406 ORTHO05D007883 6.1e-69 265.4 298 45.3
SMO172G0153 Selaginella moellendorffii HOM05D006406 ORTHO05D007883 1.4e-68 264.2 286 47.2
Zm00001eb111280 Zea mays HOM05D006406 ORTHO05D007883 7.4e-67 258.5 203 60.1
SMO172G0232 Selaginella moellendorffii HOM05D006406 ORTHO05D007883 2.8e-66 256.5 280 47.1
Hma1.2p1_1212F.1_g267270 Hydrangea macrophylla HOM05D006406 ORTHO05D007883 6.3e-66 255.4 228 58.8
Oeu043349.1 Olea europaea HOM05D006406 ORTHO05D007883 8.5e-63 245.0 188 63.8
PGSC0003DMG400024710 Solanum tuberosum HOM05D006406 ORTHO05D007883 2.7e-61 240.0 178 63.5
CBR_g19246 Chara braunii HOM05D006406 ORTHO05D007883 6.7e-60 235.3 254 43.3
HPP92_011843 Vanilla planifolia HOM05D006406 ORTHO05D007883 2.6e-56 223.4 300 42.0
SMO198G0100 Selaginella moellendorffii HOM05D006406 ORTHO05D007883 2.2e-50 203.8 271 41.7
PSO421G0497 Papaver somniferum HOM05D006406 ORTHO05D007883 8.2e-50 201.8 321 37.4
arahy.Tifrunner.gnm1.ann1.AST3BR Arachis hypogaea HOM05D006406 ORTHO05D007883 4.5e-48 196.1 158 56.3
MSTRG.16393 Avicennia marina HOM05D006406 ORTHO05D007883 3.7e-34 149.8 179 49.7
AagrBONN_evm.TU.Sc2ySwM_362.2555 Anthoceros agrestis HOM05D006406 ORTHO05D007883 4.9e-34 149.4 114 57.9
FAN02G3513 Fragaria x ananassa HOM05D006406 ORTHO05D007883 6.6e-31 139.0 166 50.6
BcaB07g32734 Brassica carinata HOM05D006406 ORTHO05D007883 1.8e-20 104.4 155 45.8
Lsat_1_v5_gn_5_186620 Lactuca sativa HOM05D006406 ORTHO05D007883 1.1e-12 78.6 158 36.1
AL3G41450 Arabidopsis lyrata HOM05D000059 ORTHO05D000128 8.3e-10 68.9 42 69.0
Aqoxy601s001 Aquilegia oxysepala HOM05D006406 ORTHO05D007883 7.1e-09 65.9 34 82.4
Cre09.g392700 Chlamydomonas reinhardtii HOM05D006406 ORTHO05D007883 1.6e-08 64.7 101 39.6
SMO172G0225 Selaginella moellendorffii HOM05D006406 ORTHO05D007883 1.9e-06 57.8 119 33.6


User provided reference genes

Program Settings