Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc48.91 Carica papaya HOM05D005965 ORTHO05D007283 8.6e-246 853.2 430 100.0
Gohir.D11G277600 Gossypium hirsutum HOM05D005965 ORTHO05D007283 1.4e-187 659.8 453 73.1
Gorai.007G299800 Gossypium raimondii HOM05D005965 ORTHO05D007283 4.5e-186 654.8 459 72.3
Prupe.6G321300 Prunus persica HOM05D005965 ORTHO05D007283 4.5e-186 654.8 444 73.4
Sabra13G0016500 Salix brachista HOM05D005965 ORTHO05D007283 2.7e-183 645.6 454 72.9
Cfa006624 Carpinus fangiana HOM05D005965 ORTHO05D007283 3.9e-182 641.7 456 72.6
MD04G1201200 Malus domestica HOM05D005965 ORTHO05D007283 3.3e-181 638.6 452 70.8
Potri.013G017500 Populus trichocarpa HOM05D005965 ORTHO05D007283 4.4e-181 638.3 453 72.6
Atru.chr2.26 Acer truncatum HOM05D005965 ORTHO05D007283 4.8e-180 634.8 452 71.2
QL03p021207 Quercus lobata HOM05D005965 ORTHO05D007283 6.3e-180 634.4 448 73.2
CiPaw.07G021000 Carya illinoinensis HOM05D005965 ORTHO05D007283 2.4e-179 632.5 450 70.7
GSVIVG01031150001 Vitis vinifera HOM05D005965 ORTHO05D007283 3.1e-179 632.1 449 71.5
Sabra13G0020500 Salix brachista HOM05D005965 ORTHO05D007283 1.4e-176 623.2 425 73.2
Actinidia21493 Actinidia chinensis HOM05D005965 ORTHO05D007283 5.5e-176 621.3 451 69.6
Gohir.A11G267700 Gossypium hirsutum HOM05D005965 ORTHO05D007283 1.2e-175 620.2 453 70.0
Ciclev10001128m.g Citrus clementina HOM05D005965 ORTHO05D007283 2.1e-175 619.4 452 69.9
Manes.08G118100 Manihot esculenta HOM05D005965 ORTHO05D007283 1.0e-174 617.1 450 70.4
TWI12G0462 Tripterygium wilfordii HOM05D005965 ORTHO05D007283 3.0e-174 615.5 449 70.8
CSS0001755 Camellia sinensis var. sinensis HOM05D005965 ORTHO05D007283 1.1e-173 613.6 450 70.4
Oeu043357.2 Olea europaea HOM05D005965 ORTHO05D007283 5.7e-173 611.3 447 69.8
Sed0024378 Sechium edule HOM05D005965 ORTHO05D007283 1.8e-171 606.3 454 69.4
MSTRG.20421 Avicennia marina HOM05D005965 ORTHO05D007283 5.9e-170 601.3 442 68.1
Rhsim05G0139400 Rhododendron simsii HOM05D005965 ORTHO05D007283 7.7e-170 600.9 490 65.1
ClCG02G015450 Citrullus lanatus HOM05D005965 ORTHO05D007283 1.5e-168 596.7 451 69.6
CsaV3_2G006620 Cucumis sativus L. HOM05D005965 ORTHO05D007283 3.2e-168 595.5 456 68.2
RcHm_v2.0_Chr3g0455661 Rosa chinensis HOM05D005965 ORTHO05D007283 2.1e-167 592.8 448 67.2
COL.COLO4_10514 Corchorus olitorius HOM05D005965 ORTHO05D007283 2.3e-166 589.3 386 75.4
DCAR_003352 Daucus carota HOM05D005965 ORTHO05D007283 8.8e-166 587.4 472 64.4
THA.LOC104818713 Tarenaya hassleriana HOM05D005965 ORTHO05D007283 8.8e-166 587.4 456 66.4
Aqoxy2G02987 Aquilegia oxysepala HOM05D005965 ORTHO05D007283 1.2e-165 587.0 445 67.0
Lj1g0019406 Lotus japonicus HOM05D005965 ORTHO05D007283 1.5e-165 586.6 450 65.8
FAN14G0885 Fragaria x ananassa HOM05D005965 ORTHO05D007283 9.7e-165 583.9 448 66.7
Cc02_g33090 Coffea canephora HOM05D005965 ORTHO05D007283 4.8e-164 581.6 446 68.6
TPR.G33209 Trifolium pratense HOM05D005965 ORTHO05D007283 6.3e-164 581.3 452 66.6
TAR362G0609 Trochodendron aralioides HOM05D005965 ORTHO05D007283 8.3e-164 580.9 448 67.6
Sc16g0008610 Simmondsia chinensis HOM05D005965 ORTHO05D007283 1.4e-163 580.1 447 66.4
Lalb_Chr18g0045721 Lupinus albus HOM05D005965 ORTHO05D007283 9.1e-163 577.4 452 65.0
Carub.0003s0477 Capsella rubella HOM05D005965 ORTHO05D007283 1.7e-161 573.2 452 67.0
Eucgr.H04531 Eucalyptus grandis HOM05D005965 ORTHO05D007283 1.7e-161 573.2 433 66.5
Medtr7g113100 Medicago truncatula HOM05D005965 ORTHO05D007283 1.7e-161 573.2 452 64.8
VMungo0540G0496 Vigna mungo HOM05D005965 ORTHO05D007283 1.7e-161 573.2 451 66.7
Psat0s4314g0040 Pisum sativum HOM05D005965 ORTHO05D007283 3.8e-161 572.0 476 62.6
PGR031G2641 Punica granatum HOM05D005965 ORTHO05D007283 5.0e-161 571.6 435 67.8
arahy.Tifrunner.gnm1.ann1.DHC6FB Arachis hypogaea HOM05D005965 ORTHO05D007283 6.5e-161 571.2 428 67.5
PSO151G0070 Papaver somniferum HOM05D005965 ORTHO05D007283 1.9e-160 569.7 450 66.4
Thhalv10020753m.g Eutrema salsugineum HOM05D005965 ORTHO05D007283 4.2e-160 568.5 452 66.6
FAN02G0246 Fragaria x ananassa HOM05D005965 ORTHO05D007283 7.2e-160 567.8 449 65.9
Migut.G01001 Erythranthe guttata HOM05D005965 ORTHO05D007283 9.4e-160 567.4 446 66.8
AT3G05480 Arabidopsis thaliana HOM05D005965 ORTHO05D007283 1.6e-159 566.6 452 65.7
BcaC05g30118 Brassica carinata HOM05D005965 ORTHO05D007283 2.1e-159 566.2 452 66.4
AL3G16080 Arabidopsis lyrata HOM05D005965 ORTHO05D007283 8.0e-159 564.3 452 65.7
arahy.Tifrunner.gnm1.ann1.79NSX3 Arachis hypogaea HOM05D005965 ORTHO05D007283 8.0e-159 564.3 428 67.3
Glyma.19G233800 Glycine max HOM05D005965 ORTHO05D007283 1.4e-158 563.5 451 66.1
Glyma.03G236100 Glycine max HOM05D005965 ORTHO05D007283 4.0e-158 562.0 451 65.6
vmacro19747 Vaccinium macrocarpon HOM05D005965 ORTHO05D007283 8.8e-158 560.8 433 66.7
Dinv40342 Davidia involucrata HOM05D005965 ORTHO05D007283 1.2e-157 560.5 348 79.9
Sp3g04310 Schrenkiella parvula HOM05D005965 ORTHO05D007283 2.0e-157 559.7 452 64.8
Nn3g21434 Nelumbo nucifera HOM05D005965 ORTHO05D007283 4.4e-157 558.5 449 63.9
C05p61750 Brassica napus HOM05D005965 ORTHO05D007283 1.3e-156 557.0 453 66.0
Peaxi162Scf00949g00112 Petunia axillaris HOM05D005965 ORTHO05D007283 1.3e-156 557.0 446 64.8
Phvul.006G090000 Phaseolus vulgaris HOM05D005965 ORTHO05D007283 1.3e-156 557.0 437 66.1
Hund07094 Selenicereus undatus HOM05D005965 ORTHO05D007283 3.7e-156 555.4 460 63.5
ECA246G4331 Erigeron canadensis HOM05D005965 ORTHO05D007283 1.8e-155 553.1 447 65.5
HanXRQChr03g0072671 Helianthus annuus HOM05D005965 ORTHO05D007283 3.1e-155 552.4 447 66.2
BolC5t34833H Brassica oleracea HOM05D005965 ORTHO05D007283 9.1e-155 550.8 469 63.8
Aa31LG5G15920 Aethionema arabicum HOM05D005965 ORTHO05D007283 1.6e-154 550.1 498 60.2
Sopen10g013470 Solanum pennellii HOM05D005965 ORTHO05D007283 2.7e-154 549.3 447 64.9
Solyc10g044780.2 Solanum lycopersicum HOM05D005965 ORTHO05D007283 4.5e-154 548.5 447 64.7
EL10Ac4g09921 Beta vulgaris HOM05D005965 ORTHO05D007283 1.7e-153 546.6 452 60.6
PGSC0003DMG400007478 Solanum tuberosum HOM05D005965 ORTHO05D007283 2.9e-153 545.8 447 64.2
BcaC05g30164 Brassica carinata HOM05D005965 ORTHO05D007283 5.0e-153 545.0 478 61.9
Ah.04g161100 Amaranthus hybridus HOM05D005965 ORTHO05D007283 1.5e-152 543.5 451 62.7
CAN.G1.32 Capsicum annuum HOM05D005965 ORTHO05D007283 1.5e-152 543.5 447 64.2
HanXRQChr03g0072661 Helianthus annuus HOM05D005965 ORTHO05D007283 1.5e-152 543.5 470 63.0
Hma1.2p1_1292F.1_g273670 Hydrangea macrophylla HOM05D005965 ORTHO05D007283 2.5e-152 542.7 340 79.7
Nitab4.5_0001129g0130 Nicotiana tabacum HOM05D005965 ORTHO05D007283 1.0e-150 537.3 458 63.8
MBI19_g29225_MAGBIO Magnolia biondii HOM05D005965 ORTHO05D007283 1.4e-150 537.0 456 62.7
Ca_05803_v3 Cicer arietinum L. HOM05D005965 ORTHO05D007283 1.8e-150 536.6 406 67.2
unitig_699.g19668 Utricularia gibba HOM05D005965 ORTHO05D007283 4.4e-149 531.9 443 62.3
Lj9A144T46 Lonicera japonica HOM05D005965 ORTHO05D007283 6.3e-148 528.1 342 76.3
FvH4_6g06510 Fragaria vesca HOM05D005965 ORTHO05D007283 1.8e-147 526.6 382 70.2
FAN05G3147 Fragaria x ananassa HOM05D005965 ORTHO05D007283 2.4e-147 526.2 373 71.3
Lsat_1_v5_gn_9_124801 Lactuca sativa HOM05D005965 ORTHO05D007283 4.3e-144 515.4 457 61.3
Thecc.05G312500 Theobroma cacao HOM05D005965 ORTHO05D007283 1.5e-141 506.9 372 69.9
Hma1.2p1_1292F.1_g273680 Hydrangea macrophylla HOM05D005965 ORTHO05D007283 4.4e-141 505.4 336 76.2
Migut.G01092 Erythranthe guttata HOM05D005965 ORTHO05D007283 7.5e-141 504.6 337 74.2
SGA_v2.0_scaffold172G38992 Striga asiatica HOM05D005965 ORTHO05D007283 3.7e-140 502.3 463 58.5
Eucgr.H04558 Eucalyptus grandis HOM05D005965 ORTHO05D007283 1.9e-139 500.0 433 62.1
AUR62000770 Chenopodium quinoa HOM05D005965 ORTHO05D007283 7.3e-136 488.0 396 63.4
HPP92_000400 Vanilla planifolia HOM05D005965 ORTHO05D007283 2.9e-132 476.1 452 57.5
HPP92_000403 Vanilla planifolia HOM05D005965 ORTHO05D007283 2.9e-132 476.1 448 57.8
SHI18108 Sapria himalayana HOM05D005965 ORTHO05D007283 2.8e-127 459.5 307 74.9
ATR0796G244 Amborella trichopoda HOM05D005965 ORTHO05D007283 1.1e-126 457.6 458 53.5
Migut.G01320 Erythranthe guttata HOM05D005965 ORTHO05D007283 6.4e-124 448.4 374 63.4
MELO3C031536.2 Cucumis melo HOM05D005965 ORTHO05D007283 4.6e-122 442.2 362 64.1
Haze_04145 Corylus avellana HOM05D005965 ORTHO05D007283 1.9e-120 436.8 255 82.0
AUR62005199 Chenopodium quinoa HOM05D005965 ORTHO05D007283 8.1e-119 431.4 388 57.7
SEGI_33282 Sequoiadendron giganteum HOM05D005965 ORTHO05D007283 4.0e-118 429.1 478 50.0
BraA05t23035Z Brassica rapa HOM05D005965 ORTHO05D007283 5.2e-118 428.7 364 64.3
CARHR079860 Cardamine hirsuta HOM05D005965 ORTHO05D007283 9.2e-115 417.9 255 78.4
Os03g0345100 Oryza sativa ssp. japonica HOM05D005965 ORTHO05D007283 2.1e-111 406.8 455 51.4
CDE02G1352 Ceratophyllum demersum HOM05D005965 ORTHO05D007283 2.6e-109 399.8 361 56.8
Eucgr.H04576 Eucalyptus grandis HOM05D005965 ORTHO05D007283 7.1e-107 391.7 253 73.5
Eucgr.H04573 Eucalyptus grandis HOM05D005965 ORTHO05D007283 1.1e-102 377.9 385 52.7
Eucgr.H04556 Eucalyptus grandis HOM05D005965 ORTHO05D007283 7.6e-101 371.7 417 53.2
Nitab4.5_0001057g0090 Nicotiana tabacum HOM05D005965 ORTHO05D007283 1.3e-100 370.9 354 58.5
Pp3c15_2650 Physcomitrium patens HOM05D005965 ORTHO05D007283 1.3e-97 360.9 362 51.1
Pp3c7_570 Physcomitrium patens HOM05D005965 ORTHO05D007283 3.0e-97 359.8 360 50.3
SMO134G0282 Selaginella moellendorffii HOM05D005965 ORTHO05D007283 3.0e-97 359.8 434 46.5
BraA05t19070Z Brassica rapa HOM05D005965 ORTHO05D007283 1.9e-96 357.1 245 71.0
Mapoly0078s0014 Marchantia polymorpha HOM05D005965 ORTHO05D007283 7.4e-96 355.1 352 53.7
SHI32441 Sapria himalayana HOM05D005965 ORTHO05D007283 1.1e-94 351.3 294 63.6
Zm00001eb016590 Zea mays HOM05D005965 ORTHO05D007283 8.4e-84 315.1 331 51.7
CBR_g180 Chara braunii HOM05D005965 ORTHO05D007283 9.3e-83 311.6 310 52.3
Eucgr.H04569 Eucalyptus grandis HOM05D005965 ORTHO05D007283 4.8e-79 299.3 435 45.3
Eucgr.H04571 Eucalyptus grandis HOM05D005965 ORTHO05D007283 2.9e-68 263.5 432 41.0
Psat6g098120 Pisum sativum HOM05D005965 ORTHO05D007283 2.0e-56 224.2 163 65.0
Thecc.07G184800 Theobroma cacao HOM05D005965 ORTHO05D007283 3.7e-55 219.9 234 53.8
AL3G16050 Arabidopsis lyrata HOM05D005965 ORTHO05D007283 1.2e-53 214.9 290 44.5
Thecc.07G184700 Theobroma cacao HOM05D005965 ORTHO05D007283 3.8e-52 209.9 193 59.1
Thhalv10022144m.g Eutrema salsugineum HOM05D005965 ORTHO05D007283 7.7e-45 185.7 247 46.2
Haze_04144 Corylus avellana HOM05D005965 ORTHO05D007283 3.3e-35 153.7 125 65.6
QL03p021253 Quercus lobata HOM05D005965 ORTHO05D007283 7.2e-35 152.5 93 77.4
PSO017G4250 Papaver somniferum HOM05D005965 ORTHO05D007283 1.4e-33 148.3 122 59.8
MCO01G074 Micromonas commoda HOM05D005965 ORTHO05D007283 8.9e-33 145.6 455 28.4
CARHR079870 Cardamine hirsuta HOM05D005965 ORTHO05D007283 4.1e-30 136.7 199 47.2
TAR633G2454 Trochodendron aralioides HOM05D005965 ORTHO05D007283 9.2e-30 135.6 135 56.3
DCAR_023086 Daucus carota HOM05D007620 ORTHO05D009568 5.8e-24 116.3 60 85.0
Eucgr.H04575 Eucalyptus grandis HOM05D005965 ORTHO05D007283 7.5e-24 115.9 125 47.2
Cre16.g682950 Chlamydomonas reinhardtii HOM05D005965 ORTHO05D007283 8.3e-23 112.5 229 33.6
Nitab4.5_0000524g0030 Nicotiana tabacum HOM05D005965 ORTHO05D007283 3.6e-18 97.1 202 38.6
TWI56G1489 Tripterygium wilfordii HOM05D005965 ORTHO05D007283 8.9e-17 92.4 73 65.8
SMO274G0013 Selaginella moellendorffii HOM05D005965 ORTHO05D376736 8.4e-07 59.3 98 40.8


User provided reference genes

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