Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc48.28 Carica papaya HOM05D000789 ORTHO05D120449 1.5e-50 202.6 107 100.0
Sabra05G0036300 Salix brachista HOM05D000789 ORTHO05D000897 4.0e-11 71.6 42 78.6
Potri.005G035800 Populus trichocarpa HOM05D000789 ORTHO05D000897 5.8e-10 67.8 42 76.2
Aqoxy2G03285 Aquilegia oxysepala HOM05D000789 ORTHO05D000897 2.9e-09 65.5 41 73.2
Potri.013G025000 Populus trichocarpa HOM05D000789 ORTHO05D000897 2.9e-09 65.5 42 71.4
Rhsim05G0143500 Rhododendron simsii HOM05D000789 ORTHO05D000897 3.8e-09 65.1 43 72.1
CiPaw.07G015800 Carya illinoinensis HOM05D000789 ORTHO05D000897 4.9e-09 64.7 41 73.2
Dinv23963 Davidia involucrata HOM05D000789 ORTHO05D000897 4.9e-09 64.7 43 67.4
Duzib177G1101 Durio zibethinus HOM05D000789 ORTHO05D000897 6.5e-09 64.3 43 69.8
Gohir.A08G211200 Gossypium hirsutum HOM05D000789 ORTHO05D000897 6.5e-09 64.3 43 69.8
Gohir.D08G228000 Gossypium hirsutum HOM05D000789 ORTHO05D000897 6.5e-09 64.3 43 69.8
Gorai.004G242200 Gossypium raimondii HOM05D000789 ORTHO05D000897 6.5e-09 64.3 43 69.8
QL03p005207 Quercus lobata HOM05D000789 ORTHO05D000897 6.5e-09 64.3 41 70.7
QL03p006174 Quercus lobata HOM05D000789 ORTHO05D000897 6.5e-09 64.3 41 70.7
TAR362G0975 Trochodendron aralioides HOM05D000789 ORTHO05D000897 6.5e-09 64.3 41 73.2
Sabra13G0026200 Salix brachista HOM05D000789 ORTHO05D000897 1.1e-08 63.5 42 71.4
vmacro19635 Vaccinium macrocarpon HOM05D000789 ORTHO05D000897 1.1e-08 63.5 43 69.8
CSS0004555 Camellia sinensis var. sinensis HOM05D000789 ORTHO05D000897 1.4e-08 63.2 41 68.3
Duzib128G0555 Durio zibethinus HOM05D000789 ORTHO05D000897 1.4e-08 63.2 41 65.9
Thecc.05G306100 Theobroma cacao HOM05D000789 ORTHO05D000897 1.4e-08 63.2 43 69.8
Actinidia24973 Actinidia chinensis HOM05D000789 ORTHO05D000897 1.9e-08 62.8 41 68.3
Cfa006562 Carpinus fangiana HOM05D000789 ORTHO05D000897 2.5e-08 62.4 41 70.7
COL.COLO4_13502 Corchorus olitorius HOM05D000789 ORTHO05D000897 2.5e-08 62.4 46 65.2
Haze_04221 Corylus avellana HOM05D000789 ORTHO05D000897 2.5e-08 62.4 41 70.7
Lalb_Chr04g0260821 Lupinus albus HOM05D000789 ORTHO05D000897 2.5e-08 62.4 41 68.3
Sed0013530 Sechium edule HOM05D000789 ORTHO05D000897 2.5e-08 62.4 46 65.2
Dinv40269 Davidia involucrata HOM05D000789 ORTHO05D000897 3.2e-08 62.0 43 65.1
Atru.chr2.460 Acer truncatum HOM05D000789 ORTHO05D000897 4.2e-08 61.6 41 68.3
Lalb_Chr18g0045561 Lupinus albus HOM05D000789 ORTHO05D000897 5.5e-08 61.2 41 68.3
Nn4g26212 Nelumbo nucifera HOM05D000789 ORTHO05D000897 5.5e-08 61.2 41 68.3
Ciclev10002193m.g Citrus clementina HOM05D000789 ORTHO05D000897 1.2e-07 60.1 41 65.9
Lalb_Chr15g0077171 Lupinus albus HOM05D000789 ORTHO05D000897 1.2e-07 60.1 41 65.9
Psat3g010480 Pisum sativum HOM05D000789 ORTHO05D000897 1.2e-07 60.1 41 68.3
TPR.G33187 Trifolium pratense HOM05D000789 ORTHO05D000897 1.2e-07 60.1 41 68.3
TAR365G0340 Trochodendron aralioides HOM05D000789 ORTHO05D000897 1.2e-07 60.1 41 68.3
Hma1.2p1_1362F.1_g278250 Hydrangea macrophylla HOM05D000789 ORTHO05D000897 2.1e-07 59.3 43 67.4
Nn1g02180 Nelumbo nucifera HOM05D000789 ORTHO05D000897 2.1e-07 59.3 37 73.0
Nn1g06292 Nelumbo nucifera HOM05D000789 ORTHO05D000897 2.1e-07 59.3 37 73.0
CSS0050300 Camellia sinensis var. sinensis HOM05D000789 ORTHO05D000897 2.7e-07 58.9 44 68.2
Ca_09365_v3 Cicer arietinum L. HOM05D000789 ORTHO05D000897 3.5e-07 58.5 41 65.9
Sed0026209 Sechium edule HOM05D000789 ORTHO05D000897 3.5e-07 58.5 46 63.0
RcHm_v2.0_Chr3g0454311 Rosa chinensis HOM05D000789 ORTHO05D000897 4.6e-07 58.2 41 65.9
MELO3C015332.2 Cucumis melo HOM05D000789 ORTHO05D000897 6.0e-07 57.8 41 65.9
CsaV3_1G039060 Cucumis sativus L. HOM05D000789 ORTHO05D000897 6.0e-07 57.8 41 65.9
Prupe.6G328500 Prunus persica HOM05D000789 ORTHO05D000897 6.0e-07 57.8 41 63.4
CiPaw.08G166100 Carya illinoinensis HOM05D000789 ORTHO05D000897 1.0e-06 57.0 41 61.0
Gohir.A11G263900 Gossypium hirsutum HOM05D000789 ORTHO05D000897 1.0e-06 57.0 46 69.6
Gohir.D11G274000 Gossypium hirsutum HOM05D000789 ORTHO05D000897 1.0e-06 57.0 46 69.6
Gorai.007G295600 Gossypium raimondii HOM05D000789 ORTHO05D000897 1.0e-06 57.0 46 69.6
Medtr7g113680 Medicago truncatula HOM05D000789 ORTHO05D000897 1.3e-06 56.6 41 65.9
ClCG03G016880 Citrullus lanatus HOM05D000789 ORTHO05D000897 2.3e-06 55.8 41 63.4
FvH4_6g05540 Fragaria vesca HOM05D000789 ORTHO05D000897 3.0e-06 55.5 41 61.0
FAN02G0341 Fragaria x ananassa HOM05D000789 ORTHO05D000897 3.0e-06 55.5 41 61.0
FAN05G2572 Fragaria x ananassa HOM05D000789 ORTHO05D000897 3.0e-06 55.5 41 61.0
FAN05G3441 Fragaria x ananassa HOM05D000789 ORTHO05D000897 3.0e-06 55.5 41 61.0
FAN14G3079 Fragaria x ananassa HOM05D000789 ORTHO05D000897 3.0e-06 55.5 41 61.0
FAN14G3104 Fragaria x ananassa HOM05D000789 ORTHO05D000897 3.0e-06 55.5 41 61.0
MD12G1221800 Malus domestica HOM05D000789 ORTHO05D000897 3.0e-06 55.5 41 58.5
Phvul.006G093200 Phaseolus vulgaris HOM05D000789 ORTHO05D000897 3.0e-06 55.5 41 63.4
arahy.Tifrunner.gnm1.ann1.0G5T8T Arachis hypogaea HOM05D000789 ORTHO05D000897 3.9e-06 55.1 41 63.4
arahy.Tifrunner.gnm1.ann1.WLF6LC Arachis hypogaea HOM05D000789 ORTHO05D000897 3.9e-06 55.1 41 63.4
Lalb_Chr02g0148321 Lupinus albus HOM05D000789 ORTHO05D000897 3.9e-06 55.1 42 66.7
Oeu042786.1 Olea europaea HOM05D000789 ORTHO05D000897 3.9e-06 55.1 42 64.3
VMungo0314G0001 Vigna mungo HOM05D000789 ORTHO05D000897 3.9e-06 55.1 41 63.4
Glyma.19G236400 Glycine max HOM05D000789 ORTHO05D000897 8.7e-06 53.9 41 63.4
Prupe.1G152500 Prunus persica HOM05D000789 ORTHO05D000897 8.7e-06 53.9 39 64.1


User provided reference genes

Program Settings