Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc48.233 Carica papaya HOM05D008155 ORTHO05D010411 1.8e-78 295.8 145 100.0
Manes.09G182600 Manihot esculenta HOM05D008155 ORTHO05D010411 8.2e-15 84.3 114 43.0
QL03p011396 Quercus lobata HOM05D008155 ORTHO05D010411 2.4e-14 82.8 116 45.7
Prupe.6G302400 Prunus persica HOM05D008155 ORTHO05D010411 1.3e-12 77.0 122 40.2
Manes.08G106200 Manihot esculenta HOM05D008155 ORTHO05D010411 2.9e-12 75.9 114 41.2
Haze_15003 Corylus avellana HOM05D008155 ORTHO05D010411 1.1e-11 73.9 116 39.7
Sed0023159 Sechium edule HOM05D008155 ORTHO05D010411 4.2e-11 72.0 143 36.4
Thecc.05G331400 Theobroma cacao HOM05D008155 ORTHO05D010411 1.2e-10 70.5 126 38.9
Glyma.19G224100 Glycine max HOM05D008155 ORTHO05D010411 2.1e-10 69.7 50 60.0
VMungo1383G2435 Vigna mungo HOM05D008155 ORTHO05D010411 2.7e-10 69.3 131 34.4
CANSAT54G1408 Cannabis sativa HOM05D008155 ORTHO05D010411 3.6e-10 68.9 111 43.2
Cfa004403 Carpinus fangiana HOM05D008155 ORTHO05D010411 4.6e-10 68.6 116 37.9
Phvul.001G221000 Phaseolus vulgaris HOM05D008155 ORTHO05D010411 6.1e-10 68.2 132 34.8
RcHm_v2.0_Chr3g0459031 Rosa chinensis HOM05D008155 ORTHO05D010411 7.9e-10 67.8 117 41.9
SalBow4G1718 Salvia bowleyana HOM05D008155 ORTHO05D010411 1.0e-09 67.4 51 60.8
SalBow4G2153 Salvia bowleyana HOM05D008155 ORTHO05D010411 1.0e-09 67.4 51 60.8
SalBow8G5556 Salvia bowleyana HOM05D008155 ORTHO05D010411 1.0e-09 67.4 51 60.8
Atru.chr12.1507 Acer truncatum HOM05D008155 ORTHO05D010411 1.4e-09 67.0 51 56.9
Ciclev10029557m.g Citrus clementina HOM05D008155 ORTHO05D010411 1.4e-09 67.0 128 38.3
TPR.G35721 Trifolium pratense HOM05D008155 ORTHO05D010411 2.3e-09 66.2 53 54.7
MD04G1183800 Malus domestica HOM05D008155 ORTHO05D010411 3.0e-09 65.9 120 35.0
Hma1.2p1_0157F.1_g069510 Hydrangea macrophylla HOM05D008155 ORTHO05D010411 5.1e-09 65.1 97 43.3
MD12G1197100 Malus domestica HOM05D008155 ORTHO05D010411 5.1e-09 65.1 123 38.2
Potri.013G000200 Populus trichocarpa HOM05D008155 ORTHO05D010411 5.1e-09 65.1 113 36.3
Atru.chr12.1502 Acer truncatum HOM05D008155 ORTHO05D010411 6.7e-09 64.7 51 54.9
COL.COLO4_05473 Corchorus olitorius HOM05D008155 ORTHO05D010411 6.7e-09 64.7 135 38.5
vmacro19804 Vaccinium macrocarpon HOM05D003050 ORTHO05D003513 6.7e-09 64.7 86 43.0
Migut.N00987 Erythranthe guttata HOM05D008155 ORTHO05D010411 8.8e-09 64.3 49 55.1
Sopen01g044900 Solanum pennellii HOM05D008155 ORTHO05D010411 1.1e-08 63.9 149 32.9
Gorai.013G241100 Gossypium raimondii HOM05D008155 ORTHO05D010411 1.5e-08 63.5 48 58.3
Solyc01g102460.4 Solanum lycopersicum HOM05D008155 ORTHO05D010411 1.5e-08 63.5 149 32.9
Aqoxy7G02124 Aquilegia oxysepala HOM05D008155 ORTHO05D010411 2.0e-08 63.2 113 38.1
CSS0011875 Camellia sinensis var. sinensis HOM05D008155 ORTHO05D010411 2.0e-08 63.2 147 31.3
Glyma.03G227200 Glycine max HOM05D008155 ORTHO05D010411 2.0e-08 63.2 139 33.8
Gohir.A13G206400 Gossypium hirsutum HOM05D008155 ORTHO05D010411 4.3e-08 62.0 48 56.2
Potri.005G001100 Populus trichocarpa HOM05D008155 ORTHO05D010411 9.7e-08 60.8 94 39.4
TWI56G0796 Tripterygium wilfordii HOM05D008155 ORTHO05D010411 9.7e-08 60.8 122 36.9
TAR362G0658 Trochodendron aralioides HOM05D008155 ORTHO05D010411 9.7e-08 60.8 127 34.6
CSS0018964 Camellia sinensis var. sinensis HOM05D008155 ORTHO05D010411 1.3e-07 60.5 63 44.4
MELO3C004141.2 Cucumis melo HOM05D008155 ORTHO05D010411 2.2e-07 59.7 121 38.0
PGSC0003DMG400018233 Solanum tuberosum HOM05D008155 ORTHO05D010411 2.2e-07 59.7 50 54.0
arahy.Tifrunner.gnm1.ann1.QRZ24D Arachis hypogaea HOM05D008155 ORTHO05D010411 2.8e-07 59.3 114 36.0
Nitab4.5_0006193g0010 Nicotiana tabacum HOM05D008155 ORTHO05D010411 3.7e-07 58.9 37 64.9
CsaV3_2G007430 Cucumis sativus L. HOM05D008155 ORTHO05D010411 4.8e-07 58.5 118 36.4
MSTRG.5176 Avicennia marina HOM05D008155 ORTHO05D010411 6.3e-07 58.2 49 55.1
FAN02G1576 Fragaria x ananassa HOM05D008155 ORTHO05D010411 8.2e-07 57.8 112 38.4
Medtr7g111230 Medicago truncatula HOM05D008155 ORTHO05D010411 1.4e-06 57.0 53 45.3
EL10Ac6g15313 Beta vulgaris HOM05D008155 ORTHO05D010411 3.1e-06 55.8 108 38.0
TAR365G0599 Trochodendron aralioides HOM05D008155 ORTHO05D010411 3.1e-06 55.8 65 41.5
FAN14G4286 Fragaria x ananassa HOM05D008155 ORTHO05D010411 4.1e-06 55.5 110 36.4
Rhsim11G0107200 Rhododendron simsii HOM05D008155 ORTHO05D010411 5.3e-06 55.1 38 55.3
Aa31LG11G10020 Aethionema arabicum HOM05D008255 ORTHO05D011943 9.1e-06 54.3 66 45.5


User provided reference genes

Program Settings