Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc48.123 Carica papaya HOM05D007336 ORTHO05D009339 2.6e-121 438.7 220 100.0
Haze_04108 Corylus avellana HOM05D002548 ORTHO05D003031 7.5e-36 154.8 200 48.5
Aqoxy2G02873 Aquilegia oxysepala HOM05D007336 ORTHO05D009339 2.2e-32 143.3 205 44.9
Prupe.6G317700 Prunus persica HOM05D007336 ORTHO05D009339 2.2e-32 143.3 203 45.3
QL03p019121 Quercus lobata HOM05D007336 ORTHO05D009339 6.5e-32 141.7 248 39.9
MD04G1197300 Malus domestica HOM05D007336 ORTHO05D009339 1.1e-31 141.0 204 44.1
Manes.01G127100 Manihot esculenta HOM05D007336 ORTHO05D009339 1.5e-31 140.6 207 43.5
GSVIVG01031156001 Vitis vinifera HOM05D007336 ORTHO05D009339 1.9e-31 140.2 205 43.9
Cfa006663 Carpinus fangiana HOM05D007336 ORTHO05D009339 4.2e-31 139.0 200 44.0
CiPaw.08G158700 Carya illinoinensis HOM05D007336 ORTHO05D009339 4.2e-31 139.0 200 44.0
MD12G1210100 Malus domestica HOM05D007336 ORTHO05D009339 7.2e-31 138.3 203 43.3
Ciclev10002848m.g Citrus clementina HOM05D007336 ORTHO05D009339 9.5e-31 137.9 200 43.5
ClCG02G015210 Citrullus lanatus HOM05D007336 ORTHO05D009339 2.8e-30 136.3 206 43.7
FAN02G4454 Fragaria x ananassa HOM05D007336 ORTHO05D009339 2.8e-30 136.3 203 43.8
Atru.chr1.2192 Acer truncatum HOM05D007336 ORTHO05D009339 4.7e-30 135.6 205 42.4
Duzib128G0390 Durio zibethinus HOM05D007336 ORTHO05D009339 1.0e-29 134.4 200 44.0
Phvul.001G227200 Phaseolus vulgaris HOM05D007336 ORTHO05D009339 1.0e-29 134.4 206 41.7
TAR362G0973 Trochodendron aralioides HOM05D007336 ORTHO05D009339 1.4e-29 134.0 200 43.5
CsaV3_2G006800 Cucumis sativus L. HOM05D007336 ORTHO05D009339 1.8e-29 133.7 206 43.7
MELO3C004210.2 Cucumis melo HOM05D007336 ORTHO05D009339 2.3e-29 133.3 206 43.7
FvH4_6g06960 Fragaria vesca HOM05D007336 ORTHO05D009339 2.3e-29 133.3 203 42.4
FAN05G1709 Fragaria x ananassa HOM05D007336 ORTHO05D009339 3.0e-29 132.9 203 42.4
FAN05G3591 Fragaria x ananassa HOM05D007336 ORTHO05D009339 3.0e-29 132.9 203 42.4
FAN09G1805 Fragaria x ananassa HOM05D007336 ORTHO05D009339 3.0e-29 132.9 203 42.4
FAN14G5314 Fragaria x ananassa HOM05D007336 ORTHO05D009339 3.0e-29 132.9 203 42.4
Atru.chr1.2191 Acer truncatum HOM05D007336 ORTHO05D009339 4.0e-29 132.5 205 42.0
PGR031G1948 Punica granatum HOM05D007336 ORTHO05D009339 5.2e-29 132.1 197 43.1
Gorai.007G303000 Gossypium raimondii HOM05D007336 ORTHO05D009339 1.2e-28 131.0 203 42.9
RcHm_v2.0_Chr3g0456501 Rosa chinensis HOM05D007336 ORTHO05D009339 1.2e-28 131.0 203 41.4
Thecc.05G317300 Theobroma cacao HOM05D007336 ORTHO05D009339 1.2e-28 131.0 200 43.0
Eucgr.H03266 Eucalyptus grandis HOM05D007336 ORTHO05D009339 2.6e-28 129.8 200 41.5
COL.COLO4_03798 Corchorus olitorius HOM05D007336 ORTHO05D009339 4.4e-28 129.0 200 41.5
Glyma.19G230700 Glycine max HOM05D007336 ORTHO05D009339 4.4e-28 129.0 198 41.9
Lj1g0024848 Lotus japonicus HOM05D007336 ORTHO05D009339 5.7e-28 128.6 195 40.0
Potri.005G021800 Populus trichocarpa HOM05D007336 ORTHO05D009339 7.5e-28 128.3 195 42.6
Gohir.D11G280800 Gossypium hirsutum HOM05D007336 ORTHO05D009339 9.8e-28 127.9 203 42.4
Eucgr.H03264 Eucalyptus grandis HOM05D007336 ORTHO05D009339 1.3e-27 127.5 200 42.0
CANSAT54G2288 Cannabis sativa HOM05D007336 ORTHO05D009339 1.7e-27 127.1 200 42.5
Lalb_Chr16g0391581 Lupinus albus HOM05D007336 ORTHO05D009339 4.9e-27 125.6 195 40.0
MBI18_g25083_MAGBIO Magnolia biondii HOM05D007336 ORTHO05D009339 4.9e-27 125.6 205 39.5
Psat0s3672g0040 Pisum sativum HOM05D007336 ORTHO05D009339 6.3e-27 125.2 199 39.7
THA.LOC104805904 Tarenaya hassleriana HOM05D007336 ORTHO05D009339 1.1e-26 124.4 195 40.5
arahy.Tifrunner.gnm1.ann1.N7WCQ3 Arachis hypogaea HOM05D000001 ORTHO05D010781 2.4e-26 123.2 199 40.7
arahy.Tifrunner.gnm1.ann1.63GRQU Arachis hypogaea HOM05D007336 ORTHO05D010781 4.1e-26 122.5 199 40.2
MSTRG.3884 Avicennia marina HOM05D007336 ORTHO05D009339 4.1e-26 122.5 205 39.0
Migut.G00122 Erythranthe guttata HOM05D007336 ORTHO05D009339 7.0e-26 121.7 205 39.0
Aa31LG2G11600 Aethionema arabicum HOM05D007336 ORTHO05D009339 1.6e-25 120.6 197 39.1
Sp2g06650 Schrenkiella parvula HOM05D007336 ORTHO05D009339 3.5e-25 119.4 197 37.6
A01p27330 Brassica napus HOM05D007336 ORTHO05D009339 2.9e-24 116.3 197 38.1
C01p35170 Brassica napus HOM05D007336 ORTHO05D009339 2.9e-24 116.3 197 38.1
BolC1t03475H Brassica oleracea HOM05D007336 ORTHO05D009339 2.9e-24 116.3 197 38.1
BraA01t02872Z Brassica rapa HOM05D007336 ORTHO05D009339 2.9e-24 116.3 197 38.1
Prupe.3G209800 Prunus persica HOM05D007336 ORTHO05D009339 2.9e-24 116.3 114 57.0
SEGI_32823 Sequoiadendron giganteum HOM05D007336 ORTHO05D009339 2.9e-24 116.3 199 37.2
Prupe.2G221300 Prunus persica HOM05D007336 ORTHO05D009339 3.8e-24 115.9 119 56.3
SalBow2G0618 Salvia bowleyana HOM05D007336 ORTHO05D009339 3.8e-24 115.9 200 38.5
Sed0016582 Sechium edule HOM05D007336 ORTHO05D009339 3.8e-24 115.9 112 57.1
BcaC09g49567 Brassica carinata HOM05D007336 ORTHO05D009339 6.6e-24 115.2 197 37.1
AUR62015269 Chenopodium quinoa HOM05D007336 ORTHO05D009339 6.6e-24 115.2 200 39.0
CDE02G0601 Ceratophyllum demersum HOM05D007336 ORTHO05D009339 8.6e-24 114.8 201 37.3
BcaB04g20156 Brassica carinata HOM05D007336 ORTHO05D009339 1.9e-23 113.6 197 37.1
AUR62018066 Chenopodium quinoa HOM05D007336 ORTHO05D009339 1.9e-23 113.6 200 38.5
Dinv29713 Davidia involucrata HOM05D002548 ORTHO05D003031 1.9e-23 113.6 202 39.6
Dinv44340 Davidia involucrata HOM05D007336 ORTHO05D009339 2.5e-23 113.2 202 40.1
Rhsim04G0227800 Rhododendron simsii HOM05D007336 ORTHO05D009339 2.5e-23 113.2 200 39.0
Hund20531 Selenicereus undatus HOM05D007336 ORTHO05D009339 2.5e-23 113.2 200 40.0
Eucgr.H03263 Eucalyptus grandis HOM05D007336 ORTHO05D009339 4.3e-23 112.5 107 57.9
Nitab4.5_0002755g0010 Nicotiana tabacum HOM05D007336 ORTHO05D009339 5.6e-23 112.1 194 39.2
SGA_v2.0_scaffold104G30104 Striga asiatica HOM05D007336 ORTHO05D009339 7.3e-23 111.7 205 38.0
vmacro08103 Vaccinium macrocarpon HOM05D007336 ORTHO05D009339 7.3e-23 111.7 197 38.6
Eucgr.H03265 Eucalyptus grandis HOM05D007336 ORTHO05D009339 9.5e-23 111.3 107 57.9
Eucgr.L02901 Eucalyptus grandis HOM05D007336 ORTHO05D009339 9.5e-23 111.3 107 57.9
AL1G65880 Arabidopsis lyrata HOM05D007336 ORTHO05D009339 1.2e-22 110.9 200 36.5
AT1G56260 Arabidopsis thaliana HOM05D007336 ORTHO05D009339 1.2e-22 110.9 200 37.5
Thhalv10023757m.g Eutrema salsugineum HOM05D007336 ORTHO05D009339 1.2e-22 110.9 197 37.1
Carub.0002s0790 Capsella rubella HOM05D007336 ORTHO05D009339 3.6e-22 109.4 200 36.5
Medtr7g112530 Medicago truncatula HOM05D007336 ORTHO05D009339 4.7e-22 109.0 195 36.4
Sc19g0005520 Simmondsia chinensis HOM05D007336 ORTHO05D009339 6.1e-22 108.6 200 39.5
TPR.G39916 Trifolium pratense HOM05D007336 ORTHO05D009339 6.1e-22 108.6 195 36.4
Actinidia40305 Actinidia chinensis HOM05D007336 ORTHO05D009339 8.0e-22 108.2 202 37.6
HPP92_013733 Vanilla planifolia HOM05D007336 ORTHO05D009339 8.0e-22 108.2 203 36.0
Cc03_g01420 Coffea canephora HOM05D007336 ORTHO05D009339 1.0e-21 107.8 200 39.0
ATR0693G059 Amborella trichopoda HOM05D007336 ORTHO05D009339 2.3e-21 106.7 114 49.1
EL10Ac3g06656 Beta vulgaris HOM05D007336 ORTHO05D009339 3.0e-21 106.3 200 36.5
VMungo1383G0834 Vigna mungo HOM05D007336 ORTHO05D009339 3.0e-21 106.3 119 48.7
DCAR_030493 Daucus carota HOM05D007336 ORTHO05D009339 8.9e-21 104.8 205 34.6
CSS0001044 Camellia sinensis var. sinensis HOM05D007336 ORTHO05D009339 1.2e-20 104.4 197 37.6
Lsat_1_v5_gn_6_76001 Lactuca sativa HOM05D007336 ORTHO05D009339 1.5e-20 104.0 208 36.1
Nitab4.5_0000306g0320 Nicotiana tabacum HOM05D007336 ORTHO05D009339 2.0e-20 103.6 194 36.6
Nn4g25729 Nelumbo nucifera HOM05D007336 ORTHO05D009339 2.6e-20 103.2 160 43.1
CARHR289820 Cardamine hirsuta HOM05D007336 ORTHO05D009339 3.4e-20 102.8 197 34.0
HanXRQChr13g0413951 Helianthus annuus HOM05D007336 ORTHO05D009339 4.4e-20 102.4 113 53.1
CAN.G14.12 Capsicum annuum HOM05D007336 ORTHO05D009339 1.3e-19 100.9 194 37.1
Peaxi162Scf00065g01021 Petunia axillaris HOM05D007336 ORTHO05D009339 4.9e-19 99.0 194 36.6
Ah.04g153680 Amaranthus hybridus HOM05D007336 ORTHO05D009339 1.4e-18 97.4 107 53.3
PGSC0003DMG400006241 Solanum tuberosum HOM05D007336 ORTHO05D009339 3.2e-18 96.3 194 35.1
Gohir.A11G270600 Gossypium hirsutum HOM05D007336 ORTHO05D009339 5.4e-18 95.5 181 38.1
PSO832G0037 Papaver somniferum HOM05D007336 ORTHO05D009339 7.0e-18 95.1 204 33.3
Glyma.03G233600 Glycine max HOM05D007336 ORTHO05D009339 4.6e-17 92.4 141 40.4
unitig_46.g18696 Utricularia gibba HOM05D007336 ORTHO05D009339 1.7e-16 90.5 195 32.8
Zm00001eb300400 Zea mays HOM05D007336 ORTHO05D009339 1.7e-16 90.5 205 30.2
Solyc01g065710.3 Solanum lycopersicum HOM05D007336 ORTHO05D009339 2.3e-16 90.1 194 34.0
Sopen01g027110 Solanum pennellii HOM05D007336 ORTHO05D009339 2.3e-16 90.1 194 34.0
AagrBONN_evm.TU.Sc2ySwM_344.3688 Anthoceros agrestis HOM05D007336 ORTHO05D009339 6.6e-16 88.6 205 31.7
Oeu031988.1 Olea europaea HOM05D007336 ORTHO05D009339 3.1e-13 79.7 161 34.8
Pp3c22_13440 Physcomitrium patens HOM05D007336 ORTHO05D009339 6.4e-11 72.0 111 34.2
SMO137G0008 Selaginella moellendorffii HOM05D007336 ORTHO05D009339 3.9e-08 62.8 105 40.0


User provided reference genes

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