Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc47.63 Carica papaya HOM05D007000 ORTHO05D009020 3.1e-169 598.6 351 100.0
Thecc.09G291900 Theobroma cacao HOM05D007000 ORTHO05D009020 1.6e-88 330.5 320 64.1
Prupe.6G118900 Prunus persica HOM05D007000 ORTHO05D009020 1.3e-82 310.8 322 64.0
Duzib150G0107 Durio zibethinus HOM05D007000 ORTHO05D009020 4.2e-81 305.8 321 64.5
QL01p013748 Quercus lobata HOM05D007000 ORTHO05D009020 9.3e-81 304.7 336 63.1
FvH4_3g29910 Fragaria vesca HOM05D007000 ORTHO05D009020 1.8e-79 300.4 322 60.9
FAN11G3012 Fragaria x ananassa HOM05D007000 ORTHO05D009020 1.8e-79 300.4 322 60.9
FAN21G0141 Fragaria x ananassa HOM05D007000 ORTHO05D009020 1.3e-77 294.3 326 61.3
FAN16G0383 Fragaria x ananassa HOM05D007000 ORTHO05D009020 1.6e-77 293.9 322 60.6
FAN16G1383 Fragaria x ananassa HOM05D007000 ORTHO05D009020 1.6e-77 293.9 322 60.6
MD03G1134600 Malus domestica HOM05D007000 ORTHO05D009020 2.6e-75 286.6 319 61.8
CiPaw.14G103700 Carya illinoinensis HOM05D007000 ORTHO05D009020 4.5e-75 285.8 310 61.0
Eucgr.J00424 Eucalyptus grandis HOM05D007000 ORTHO05D009020 2.9e-74 283.1 319 55.5
GSVIVG01031401001 Vitis vinifera HOM05D007000 ORTHO05D009020 2.5e-73 280.0 327 57.2
RcHm_v2.0_Chr5g0055251 Rosa chinensis HOM05D007000 ORTHO05D009020 1.2e-72 277.7 319 58.3
Gohir.A07G107200 Gossypium hirsutum HOM05D007000 ORTHO05D009020 3.0e-71 273.1 323 61.6
Potri.009G149100 Populus trichocarpa HOM05D007000 ORTHO05D009020 6.7e-71 271.9 312 51.9
Atru.chr3.3385 Acer truncatum HOM05D007000 ORTHO05D009020 1.3e-69 267.7 334 51.8
Dinv12525 Davidia involucrata HOM05D007000 ORTHO05D009020 3.7e-69 266.2 320 57.8
TWI75G0014 Tripterygium wilfordii HOM05D007000 ORTHO05D009020 2.4e-68 263.5 323 52.9
Gorai.001G119400 Gossypium raimondii HOM05D007000 ORTHO05D009020 4.1e-68 262.7 319 59.9
Sabra09G0117700 Salix brachista HOM05D007000 ORTHO05D009020 4.5e-67 259.2 297 51.9
Gohir.A07G107100 Gossypium hirsutum HOM05D007000 ORTHO05D009020 5.9e-67 258.8 319 55.5
Ciclev10027793m.g Citrus clementina HOM05D007000 ORTHO05D009020 1.3e-66 257.7 322 55.3
Lalb_Chr24g0395131 Lupinus albus HOM05D007000 ORTHO05D009020 5.0e-66 255.8 328 50.9
Nn6g35052 Nelumbo nucifera HOM05D007000 ORTHO05D009020 6.5e-66 255.4 319 55.5
COL.COLO4_19295 Corchorus olitorius HOM05D007000 ORTHO05D009020 1.1e-65 254.6 251 68.9
Peaxi162Scf00789g00534 Petunia axillaris HOM05D007000 ORTHO05D009020 5.5e-65 252.3 310 49.7
TAR623G0382 Trochodendron aralioides HOM05D007000 ORTHO05D009020 2.1e-64 250.4 313 51.1
Gohir.D07G111200 Gossypium hirsutum HOM05D007000 ORTHO05D009020 6.1e-64 248.8 317 53.6
Lj3g0010220 Lotus japonicus HOM05D007000 ORTHO05D009020 7.9e-64 248.4 330 55.2
CAN.G644.32 Capsicum annuum HOM05D007000 ORTHO05D009020 1.8e-63 247.3 258 55.0
Solyc11g066870.3 Solanum lycopersicum HOM05D007000 ORTHO05D009020 3.9e-63 246.1 258 58.1
Gorai.001G119500 Gossypium raimondii HOM05D007000 ORTHO05D009020 2.5e-62 243.4 317 53.3
Manes.04G009000 Manihot esculenta HOM05D007000 ORTHO05D009020 1.3e-61 241.1 302 59.6
Glyma.13G319300 Glycine max HOM05D007000 ORTHO05D009020 3.7e-61 239.6 329 56.5
Sopen11g026580 Solanum pennellii HOM05D007000 ORTHO05D009020 4.8e-61 239.2 260 58.1
Cc01_g09830 Coffea canephora HOM05D007000 ORTHO05D009020 1.8e-60 237.3 323 51.1
Migut.D02336 Erythranthe guttata HOM05D007000 ORTHO05D009020 1.8e-60 237.3 313 48.9
PGR119G0747 Punica granatum HOM05D007000 ORTHO05D009020 2.4e-60 236.9 338 53.0
AL6G33670 Arabidopsis lyrata HOM05D007000 ORTHO05D009020 6.9e-60 235.3 314 57.3
PGSC0003DMG400026534 Solanum tuberosum HOM05D007000 ORTHO05D009020 9.1e-60 235.0 312 48.7
MSTRG.18732 Avicennia marina HOM05D007000 ORTHO05D009020 2.0e-59 233.8 264 52.7
BraA10t43904Z Brassica rapa HOM05D007000 ORTHO05D009020 2.0e-59 233.8 334 55.1
Nitab4.5_0001453g0060 Nicotiana tabacum HOM05D007000 ORTHO05D009020 2.0e-59 233.8 248 59.7
Nitab4.5_0007303g0050 Nicotiana tabacum HOM05D007000 ORTHO05D009020 2.0e-59 233.8 248 59.7
Medtr2g084835 Medicago truncatula HOM05D007000 ORTHO05D009020 2.6e-59 233.4 317 46.1
Phvul.005G127300 Phaseolus vulgaris HOM05D007000 ORTHO05D009020 7.7e-59 231.9 337 56.1
Sed0022610 Sechium edule HOM05D007000 ORTHO05D009020 2.9e-58 229.9 262 62.6
A10p18280 Brassica napus HOM05D007000 ORTHO05D009020 6.5e-58 228.8 343 53.1
VMungo1080G1560 Vigna mungo HOM05D007000 ORTHO05D009020 1.9e-57 227.3 327 54.1
Thhalv10012645m.g Eutrema salsugineum HOM05D007000 ORTHO05D009020 3.2e-57 226.5 322 54.7
ClCG02G021900 Citrullus lanatus HOM05D007000 ORTHO05D009020 1.6e-56 224.2 255 62.7
Oeu050178.1 Olea europaea HOM05D007000 ORTHO05D009020 2.1e-56 223.8 264 57.2
Oeu050179.1 Olea europaea HOM05D007000 ORTHO05D009020 2.1e-56 223.8 264 57.2
Sp6g22700 Schrenkiella parvula HOM05D007000 ORTHO05D009020 2.1e-56 223.8 314 56.1
Glyma.12G181600 Glycine max HOM05D007000 ORTHO05D009020 4.7e-56 222.6 333 51.4
MELO3C021453.2 Cucumis melo HOM05D007000 ORTHO05D009020 1.4e-55 221.1 327 53.2
AT5G22640 Arabidopsis thaliana HOM05D007000 ORTHO05D009020 6.7e-55 218.8 281 60.1
BolC9t58265H Brassica oleracea HOM05D007000 ORTHO05D009020 6.7e-55 218.8 281 59.8
CANSAT54G2429 Cannabis sativa HOM05D007000 ORTHO05D009020 2.6e-54 216.9 329 48.3
Carub.0006s2036 Capsella rubella HOM05D007000 ORTHO05D009020 5.7e-54 215.7 279 59.9
BcaB08g36412 Brassica carinata HOM05D007000 ORTHO05D009020 1.8e-52 210.7 300 55.3
CSS0049563 Camellia sinensis var. sinensis HOM05D007000 ORTHO05D009020 2.4e-52 210.3 173 69.4
C09p53930 Brassica napus HOM05D007000 ORTHO05D009020 4.1e-52 209.5 299 56.2
CARHR190940 Cardamine hirsuta HOM05D007000 ORTHO05D009020 5.3e-52 209.1 288 55.9
Ca_01679_v3 Cicer arietinum L. HOM05D007000 ORTHO05D009020 1.5e-51 207.6 307 53.4
ECA238G2375 Erigeron canadensis HOM05D007000 ORTHO05D009020 2.0e-51 207.2 326 50.9
SGA_v2.0_scaffold193G40708 Striga asiatica HOM05D007000 ORTHO05D009020 5.0e-50 202.6 267 56.6
CsaV3_6G014720 Cucumis sativus L. HOM05D007000 ORTHO05D009020 1.9e-49 200.7 256 61.3
TPR.G32364 Trifolium pratense HOM05D007000 ORTHO05D009020 3.2e-49 199.9 351 46.2
Aqoxy1G00944 Aquilegia oxysepala HOM05D007000 ORTHO05D009020 5.5e-49 199.1 306 45.8
Sc12g0004140 Simmondsia chinensis HOM05D007000 ORTHO05D009020 1.0e-47 194.9 250 52.0
ScUNg0001440 Simmondsia chinensis HOM05D007000 ORTHO05D009020 1.0e-47 194.9 250 52.0
Actinidia37100 Actinidia chinensis HOM05D007000 ORTHO05D009020 1.4e-47 194.5 350 42.3
Psat5g254800 Pisum sativum HOM05D007000 ORTHO05D009020 2.0e-46 190.7 309 49.8
Lj1A221T47 Lonicera japonica HOM05D007000 ORTHO05D009020 9.7e-46 188.3 356 46.9
EL10Ac9g21077 Beta vulgaris HOM05D007000 ORTHO05D009020 1.7e-45 187.6 271 57.2
Aa31LG1G12980 Aethionema arabicum HOM05D007000 ORTHO05D009020 2.2e-45 187.2 270 57.4
HanXRQChr14g0451961 Helianthus annuus HOM05D007000 ORTHO05D009020 8.2e-45 185.3 340 47.1
AUR62038302 Chenopodium quinoa HOM05D007000 ORTHO05D009020 1.1e-44 184.9 327 41.6
arahy.Tifrunner.gnm1.ann1.0Z9K9L Arachis hypogaea HOM05D007000 ORTHO05D009020 2.4e-44 183.7 402 44.3
AUR62023939 Chenopodium quinoa HOM05D007000 ORTHO05D009020 2.4e-44 183.7 173 61.8
arahy.Tifrunner.gnm1.ann1.K5NCJW Arachis hypogaea HOM05D007000 ORTHO05D009020 1.2e-43 181.4 400 43.5
Gohir.D07G111100 Gossypium hirsutum HOM05D007000 ORTHO05D009020 1.6e-43 181.0 320 46.6
ATR0820G103 Amborella trichopoda HOM05D007000 ORTHO05D009020 4.5e-43 179.5 120 72.5
Hund00783 Selenicereus undatus HOM05D007000 ORTHO05D009020 3.8e-42 176.4 260 57.3
PSO339G5428 Papaver somniferum HOM05D007000 ORTHO05D009020 1.1e-41 174.9 260 51.9
CDE02G4201 Ceratophyllum demersum HOM05D007000 ORTHO05D009020 2.7e-40 170.2 307 45.3
Ah.01g004600 Amaranthus hybridus HOM05D007000 ORTHO05D009020 1.0e-39 168.3 119 66.4
HPP92_011520 Vanilla planifolia HOM05D007000 ORTHO05D009020 8.8e-39 165.2 163 52.1
PSO063G0097 Papaver somniferum HOM05D007000 ORTHO05D009020 4.4e-38 162.9 260 51.9
DCAR_012163 Daucus carota HOM05D007000 ORTHO05D009020 9.8e-38 161.8 270 42.2
unitig_747.g21960 Utricularia gibba HOM05D007000 ORTHO05D009020 7.0e-36 155.6 265 49.4
Lsat_1_v5_gn_2_96400 Lactuca sativa HOM05D007000 ORTHO05D009020 2.0e-35 154.1 333 43.5
MD11G1157100 Malus domestica HOM05D007000 ORTHO05D009020 6.3e-29 132.5 251 49.4
HPP92_011511 Vanilla planifolia HOM05D007000 ORTHO05D009020 1.3e-21 108.2 68 70.6
Potri.004G188432 Populus trichocarpa HOM05D007000 ORTHO05D030830 9.8e-14 82.0 156 49.4
Actinidia27040 Actinidia chinensis HOM05D007000 ORTHO05D030830 3.1e-07 60.5 243 34.6
Mapoly0021s0145 Marchantia polymorpha HOM05D007000 ORTHO05D009020 3.1e-07 60.5 114 35.1


User provided reference genes

Program Settings