Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc46.76 Carica papaya HOM05D007076 ORTHO05D008800 9.6e-144 513.5 254 100.0
Thecc.09G139600 Theobroma cacao HOM05D007076 ORTHO05D008800 1.4e-99 366.7 252 74.6
Duzib168G1701 Durio zibethinus HOM05D007076 ORTHO05D008800 1.2e-98 363.6 252 73.8
QL02p091054 Quercus lobata HOM05D007076 ORTHO05D008800 6.1e-98 361.3 252 72.2
CANSAT11G0571 Cannabis sativa HOM05D007076 ORTHO05D008800 2.3e-97 359.4 249 72.7
FvH4_1g01870 Fragaria vesca HOM05D007076 ORTHO05D008800 2.3e-97 359.4 256 69.9
FAN19G3087 Fragaria x ananassa HOM05D007076 ORTHO05D008800 2.3e-97 359.4 256 69.9
FAN26G2288 Fragaria x ananassa HOM05D007076 ORTHO05D008800 2.3e-97 359.4 256 70.3
FAN23G1541 Fragaria x ananassa HOM05D007076 ORTHO05D008800 8.8e-97 357.5 257 69.6
MD15G1161100 Malus domestica HOM05D007076 ORTHO05D008800 3.3e-96 355.5 253 71.5
Manes.14G120300 Manihot esculenta HOM05D007076 ORTHO05D008800 5.7e-96 354.8 251 70.9
RcHm_v2.0_Chr2g0086841 Rosa chinensis HOM05D007076 ORTHO05D008800 5.7e-96 354.8 256 69.1
GSVIVG01012872001 Vitis vinifera HOM05D007076 ORTHO05D008800 2.2e-95 352.8 210 81.4
Gohir.A05G012200 Gossypium hirsutum HOM05D007076 ORTHO05D008800 1.1e-94 350.5 251 71.3
Gorai.009G013300 Gossypium raimondii HOM05D007076 ORTHO05D008800 2.4e-94 349.4 251 71.7
Gohir.D05G013300 Gossypium hirsutum HOM05D007076 ORTHO05D008800 2.6e-93 345.9 251 71.3
Actinidia21919 Actinidia chinensis HOM05D007076 ORTHO05D008800 7.7e-93 344.4 251 69.7
CiPaw.15G183500 Carya illinoinensis HOM05D007076 ORTHO05D008800 7.7e-93 344.4 252 69.4
Prupe.7G256300 Prunus persica HOM05D007076 ORTHO05D008800 7.7e-93 344.4 252 69.4
Eucgr.C04107 Eucalyptus grandis HOM05D007076 ORTHO05D008800 1.3e-92 343.6 252 69.8
ClCG06G011950 Citrullus lanatus HOM05D007076 ORTHO05D008800 5.0e-92 341.7 254 69.7
Ciclev10009248m.g Citrus clementina HOM05D007076 ORTHO05D008800 5.0e-92 341.7 254 67.3
TWI34G1052 Tripterygium wilfordii HOM05D007076 ORTHO05D008800 6.5e-92 341.3 252 71.0
MELO3C010270.2 Cucumis melo HOM05D007076 ORTHO05D008800 8.5e-92 340.9 247 71.3
Lsat_1_v5_gn_7_46141 Lactuca sativa HOM05D007076 ORTHO05D008800 4.2e-91 338.6 246 70.3
Lalb_Chr07g0179431 Lupinus albus HOM05D007076 ORTHO05D008800 5.5e-91 338.2 252 69.0
Potri.006G060100 Populus trichocarpa HOM05D007076 ORTHO05D008800 9.4e-91 337.4 252 67.5
TAR625G0498 Trochodendron aralioides HOM05D007076 ORTHO05D008800 1.2e-90 337.0 253 70.8
Ca_21630_v3 Cicer arietinum L. HOM05D007076 ORTHO05D008800 3.6e-90 335.5 253 68.0
Ca_30692_v3 Cicer arietinum L. HOM05D007076 ORTHO05D008800 3.6e-90 335.5 253 68.0
COL.COLO4_24128 Corchorus olitorius HOM05D007076 ORTHO05D008800 4.7e-90 335.1 205 78.5
Sed0007180 Sechium edule HOM05D007076 ORTHO05D008800 4.7e-90 335.1 249 68.7
Oeu058595.1 Olea europaea HOM05D007076 ORTHO05D008800 7.9e-90 334.3 254 68.9
Cfa020904 Carpinus fangiana HOM05D007076 ORTHO05D008800 1.8e-89 333.2 256 69.1
Glyma.13G164900 Glycine max HOM05D007076 ORTHO05D008800 5.1e-89 331.6 244 68.0
Medtr4g116350 Medicago truncatula HOM05D007076 ORTHO05D008800 5.1e-89 331.6 254 67.7
A04p35120 Brassica napus HOM05D007076 ORTHO05D008800 6.7e-89 331.3 211 74.9
BraA04t18948Z Brassica rapa HOM05D007076 ORTHO05D008800 6.7e-89 331.3 211 74.9
HanXRQChr09g0243091 Helianthus annuus HOM05D007076 ORTHO05D008800 6.7e-89 331.3 245 69.4
Lj4g0004831 Lotus japonicus HOM05D007076 ORTHO05D008800 1.1e-88 330.5 245 67.3
VMungo1215G2969 Vigna mungo HOM05D007076 ORTHO05D008800 1.1e-88 330.5 249 66.3
Glyma.17G106200 Glycine max HOM05D007076 ORTHO05D008800 1.5e-88 330.1 248 67.3
PGR142G4145 Punica granatum HOM05D007076 ORTHO05D008800 1.5e-88 330.1 249 68.7
BcaC02g06997 Brassica carinata HOM05D007076 ORTHO05D008800 3.3e-88 328.9 216 72.7
FAN28G0280 Fragaria x ananassa HOM05D007076 ORTHO05D008800 3.3e-88 328.9 256 65.6
MSTRG.19622 Avicennia marina HOM05D007076 ORTHO05D008800 4.4e-88 328.6 254 68.5
CsaV3_1G028410 Cucumis sativus L. HOM05D007076 ORTHO05D008800 5.7e-88 328.2 250 68.4
vmacro21890 Vaccinium macrocarpon HOM05D007076 ORTHO05D008800 7.4e-88 327.8 255 67.5
Nitab4.5_0003305g0010 Nicotiana tabacum HOM05D007076 ORTHO05D008800 2.2e-87 326.2 252 67.1
Migut.J01262 Erythranthe guttata HOM05D007076 ORTHO05D008800 2.8e-87 325.9 208 74.5
Peaxi162Scf00088g00017 Petunia axillaris HOM05D007076 ORTHO05D008800 4.8e-87 325.1 257 66.9
Rhsim01G0051700 Rhododendron simsii HOM05D007076 ORTHO05D008800 6.3e-87 324.7 249 66.7
CARHR143300 Cardamine hirsuta HOM05D007076 ORTHO05D008800 8.2e-87 324.3 243 66.7
THA.LOC104817530 Tarenaya hassleriana HOM05D007076 ORTHO05D008800 8.2e-87 324.3 250 66.0
BolC4t28783H Brassica oleracea HOM05D007076 ORTHO05D008800 1.1e-86 323.9 217 72.4
Ah.00g000030 Amaranthus hybridus HOM05D007076 ORTHO05D008800 2.4e-86 322.8 202 76.7
Aa31LG1G29340 Aethionema arabicum HOM05D007076 ORTHO05D008800 4.1e-86 322.0 250 67.6
Nitab4.5_0008829g0010 Nicotiana tabacum HOM05D007076 ORTHO05D008800 1.2e-85 320.5 258 65.1
Sabra06G0043400 Salix brachista HOM05D000638 ORTHO05D000801 2.6e-85 319.3 206 74.3
Sp4g29830 Schrenkiella parvula HOM05D007076 ORTHO05D008800 2.6e-85 319.3 209 73.2
CAN.G728.2 Capsicum annuum HOM05D007076 ORTHO05D008800 3.5e-85 318.9 251 66.9
Solyc07g007280.4 Solanum lycopersicum HOM05D007076 ORTHO05D008800 3.5e-85 318.9 246 66.3
Carub.0004s3063 Capsella rubella HOM05D007076 ORTHO05D008800 4.5e-85 318.5 207 75.4
DCAR_017767 Daucus carota HOM05D007076 ORTHO05D008800 4.5e-85 318.5 203 76.4
Thhalv10001598m.g Eutrema salsugineum HOM05D007076 ORTHO05D008800 5.9e-85 318.2 205 74.1
AL4G47500 Arabidopsis lyrata HOM05D007076 ORTHO05D008800 7.7e-85 317.8 221 71.9
Psat7g049360 Pisum sativum HOM05D007076 ORTHO05D008800 1.3e-84 317.0 252 66.3
BcaB06g29501 Brassica carinata HOM05D007076 ORTHO05D008800 2.9e-84 315.8 197 75.6
TPR.G15804 Trifolium pratense HOM05D007076 ORTHO05D008800 2.9e-84 315.8 252 65.5
AUR62041461 Chenopodium quinoa HOM05D007076 ORTHO05D008800 1.5e-83 313.5 240 66.2
Sopen07g003340 Solanum pennellii HOM05D007076 ORTHO05D008800 3.2e-83 312.4 246 66.3
MBI14_g03617_MAGBIO Magnolia biondii HOM05D007076 ORTHO05D008800 9.4e-83 310.8 255 64.3
PGSC0003DMG400030692 Solanum tuberosum HOM05D007076 ORTHO05D008800 9.4e-83 310.8 249 64.7
EL10Ac8g18804 Beta vulgaris HOM05D007076 ORTHO05D008800 1.2e-82 310.5 262 62.6
Nn2g12218 Nelumbo nucifera HOM05D007076 ORTHO05D008800 2.1e-82 309.7 214 71.0
Nn1g00072 Nelumbo nucifera HOM05D007076 ORTHO05D008800 8.0e-82 307.8 210 71.9
Dinv41435 Davidia involucrata HOM05D007076 ORTHO05D008800 3.0e-81 305.8 212 70.3
PSO170G2339 Papaver somniferum HOM05D007076 ORTHO05D008800 5.2e-81 305.1 249 63.1
CDE05G2705 Ceratophyllum demersum HOM05D007076 ORTHO05D008800 3.7e-79 298.9 221 66.5
Aqoxy7G02462 Aquilegia oxysepala HOM05D007076 ORTHO05D008800 6.3e-79 298.1 257 62.3
PSO017G3183 Papaver somniferum HOM05D007076 ORTHO05D008800 8.2e-79 297.7 249 62.2
SalBow1G5229 Salvia bowleyana HOM05D007076 ORTHO05D008800 8.2e-79 297.7 253 62.5
Atru.chr7.279 Acer truncatum HOM05D007076 ORTHO05D008800 4.1e-78 295.4 185 76.2
Cc06_g07520 Coffea canephora HOM05D007076 ORTHO05D008800 5.3e-78 295.0 286 55.2
Haze_19333 Corylus avellana HOM05D007076 ORTHO05D008800 2.0e-77 293.1 256 62.5
Lj9A706G31 Lonicera japonica HOM05D007076 ORTHO05D008800 1.9e-75 286.6 184 74.5
Phvul.003G173400 Phaseolus vulgaris HOM05D007076 ORTHO05D008800 4.2e-75 285.4 179 73.2
C04p73020 Brassica napus HOM05D007076 ORTHO05D008800 1.6e-74 283.5 174 76.4
Os08g0167500 Oryza sativa ssp. japonica HOM05D007076 ORTHO05D008800 3.6e-74 282.3 198 68.2
ECA240G2388 Erigeron canadensis HOM05D007076 ORTHO05D008800 1.4e-73 280.4 171 76.6
arahy.Tifrunner.gnm1.ann1.W7VCER Arachis hypogaea HOM05D007076 ORTHO05D008800 1.8e-73 280.0 248 59.7
ATR0681G287 Amborella trichopoda HOM05D007076 ORTHO05D008800 5.2e-73 278.5 199 66.8
Zm00001eb172070 Zea mays HOM05D007076 ORTHO05D008800 5.2e-73 278.5 253 58.1
AT2G47910 Arabidopsis thaliana HOM05D007076 ORTHO05D008800 8.8e-73 277.7 183 73.2
Atru.BG.23.p Acer truncatum HOM05D007076 ORTHO05D008800 9.8e-72 274.2 177 76.3
Duzib187G0567 Durio zibethinus HOM05D007076 ORTHO05D008800 1.2e-66 257.3 169 75.1
arahy.Tifrunner.gnm1.ann1.80N34X Arachis hypogaea HOM05D007076 ORTHO05D008800 2.0e-64 250.0 248 55.6
unitig_37.g12628 Utricularia gibba HOM05D007076 ORTHO05D008800 7.5e-64 248.1 257 54.5
AUR62011242 Chenopodium quinoa HOM05D007076 ORTHO05D008800 2.3e-57 226.5 135 78.5
Mapoly0095s0056 Marchantia polymorpha HOM05D007076 ORTHO05D008800 3.5e-53 212.6 199 52.8
Nn1g04045 Nelumbo nucifera HOM05D007076 ORTHO05D008800 5.9e-53 211.8 134 76.1
SMO119G0333 Selaginella moellendorffii HOM05D007076 ORTHO05D008800 2.3e-52 209.9 173 56.6
Nn3g21909 Nelumbo nucifera HOM05D007076 ORTHO05D008800 3.0e-52 209.5 178 61.2
Pp3c22_2510 Physcomitrium patens HOM05D007076 ORTHO05D008800 5.2e-49 198.7 252 44.4
AagrBONN_evm.TU.Sc2ySwM_362.135 Anthoceros agrestis HOM05D007076 ORTHO05D008800 8.3e-39 164.9 200 46.0
Migut.J01256 Erythranthe guttata HOM05D007076 ORTHO05D008800 9.2e-38 161.4 136 60.3
MD02G1016600 Malus domestica HOM05D007076 ORTHO05D008800 5.2e-25 119.0 253 36.0
CSS0010696 Camellia sinensis var. sinensis HOM05D007076 ORTHO05D008800 7.1e-22 108.6 65 80.0
Nn1g02289 Nelumbo nucifera HOM05D007076 ORTHO05D008800 6.0e-21 105.5 71 73.2
CSS0049676 Camellia sinensis var. sinensis HOM05D007076 ORTHO05D008800 1.1e-19 101.3 61 78.7
Oeu028011.1 Olea europaea HOM05D007076 ORTHO05D008800 1.5e-19 100.9 172 39.5
Nn1g02288 Nelumbo nucifera HOM05D007076 ORTHO05D008800 2.9e-15 86.7 84 53.6
CBR_g8382 Chara braunii HOM05D007076 ORTHO05D008800 9.9e-08 61.6 64 48.4


User provided reference genes

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