Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc46.4 Carica papaya HOM05D004979 ORTHO05D006190 1.9e-95 352.4 168 100.0
Dinv24526 Davidia involucrata HOM05D004979 ORTHO05D006190 6.0e-86 320.9 166 86.7
GSVIVG01002014001 Vitis vinifera HOM05D004979 ORTHO05D006190 5.1e-85 317.8 166 87.3
Actinidia22849 Actinidia chinensis HOM05D004979 ORTHO05D006190 2.5e-84 315.5 167 84.4
GSVIVG01006954001 Vitis vinifera HOM05D004979 ORTHO05D006190 1.6e-83 312.8 166 86.1
Potri.013G000600 Populus trichocarpa HOM05D004979 ORTHO05D006190 2.8e-83 312.0 166 84.9
Oeu061912.1 Olea europaea HOM05D004979 ORTHO05D006190 3.6e-83 311.6 166 83.7
QL03p011287 Quercus lobata HOM05D004979 ORTHO05D006190 3.6e-83 311.6 166 83.1
Rhsim01G0213000 Rhododendron simsii HOM05D004979 ORTHO05D006190 2.4e-82 308.9 166 83.1
vmacro19800 Vaccinium macrocarpon HOM05D004979 ORTHO05D006190 3.1e-82 308.5 166 82.5
CSS0020951 Camellia sinensis var. sinensis HOM05D004979 ORTHO05D006190 4.0e-82 308.1 165 84.8
Lalb_Chr04g0254641 Lupinus albus HOM05D004979 ORTHO05D006190 6.9e-82 307.4 165 81.2
Nitab4.5_0002303g0020 Nicotiana tabacum HOM05D004979 ORTHO05D006190 6.9e-82 307.4 164 83.5
TPR.G33173 Trifolium pratense HOM05D004979 ORTHO05D006190 1.2e-81 306.6 165 81.8
vmacro22232 Vaccinium macrocarpon HOM05D004979 ORTHO05D006190 1.2e-81 306.6 166 82.5
Cc02_g36100 Coffea canephora HOM05D004979 ORTHO05D006190 1.5e-81 306.2 166 81.3
Hma1.2p1_0759F.1_g213770 Hydrangea macrophylla HOM05D004979 ORTHO05D006190 1.5e-81 306.2 168 82.7
Hma1.2p1_0759F.1_g213813 Hydrangea macrophylla HOM05D004979 ORTHO05D006190 1.5e-81 306.2 168 82.7
Prupe.1G583400 Prunus persica HOM05D004979 ORTHO05D006190 1.5e-81 306.2 164 82.9
TPR.G18815 Trifolium pratense HOM05D004979 ORTHO05D006190 1.5e-81 306.2 165 82.4
CSS0020926 Camellia sinensis var. sinensis HOM05D004979 ORTHO05D006190 2.0e-81 305.8 165 84.2
MSTRG.16439 Avicennia marina HOM05D004979 ORTHO05D006190 2.6e-81 305.4 166 82.5
TWI60G1029 Tripterygium wilfordii HOM05D004979 ORTHO05D006190 2.6e-81 305.4 166 83.1
Aqoxy1G02435 Aquilegia oxysepala HOM05D004979 ORTHO05D006190 3.4e-81 305.1 168 82.7
Lj4g0015757 Lotus japonicus HOM05D004979 ORTHO05D006190 3.4e-81 305.1 165 81.2
Sabra13G0000500 Salix brachista HOM05D004979 ORTHO05D006190 5.8e-81 304.3 166 83.1
Atru.chr12.1512 Acer truncatum HOM05D004979 ORTHO05D006190 7.6e-81 303.9 165 81.2
Cc02_g36050 Coffea canephora HOM05D004979 ORTHO05D006190 7.6e-81 303.9 166 79.5
GSVIVG01007211001 Vitis vinifera HOM05D004979 ORTHO05D006190 7.6e-81 303.9 192 75.0
Ciclev10028175m.g Citrus clementina HOM05D004979 ORTHO05D006190 9.9e-81 303.5 168 79.2
FvH4_7g05560 Fragaria vesca HOM05D004979 ORTHO05D006190 1.3e-80 303.1 168 79.8
Manes.08G106500 Manihot esculenta HOM05D004979 ORTHO05D006190 1.7e-80 302.8 166 81.3
MD15G1441300 Malus domestica HOM05D004979 ORTHO05D006190 2.2e-80 302.4 164 81.7
PGR004G0062 Punica granatum HOM05D004979 ORTHO05D006190 2.2e-80 302.4 165 80.0
PGR117G0001 Punica granatum HOM05D004979 ORTHO05D006190 2.2e-80 302.4 168 79.8
Ca_17455_v3 Cicer arietinum L. HOM05D004979 ORTHO05D006190 2.9e-80 302.0 165 81.2
Migut.B00894 Erythranthe guttata HOM05D004979 ORTHO05D006190 2.9e-80 302.0 167 81.4
Glyma.10G273100 Glycine max HOM05D004979 ORTHO05D006190 2.9e-80 302.0 165 79.4
MD08G1246100 Malus domestica HOM05D004979 ORTHO05D006190 2.9e-80 302.0 164 81.7
CAN.G756.6 Capsicum annuum HOM05D004979 ORTHO05D006190 3.8e-80 301.6 166 80.1
FAN03G1290 Fragaria x ananassa HOM05D004979 ORTHO05D006190 3.8e-80 301.6 168 79.8
CiPaw.01G000500 Carya illinoinensis HOM05D004979 ORTHO05D006190 4.9e-80 301.2 166 83.1
FAN01G0279 Fragaria x ananassa HOM05D004979 ORTHO05D006190 4.9e-80 301.2 164 80.5
FAN06G2997 Fragaria x ananassa HOM05D004979 ORTHO05D006190 4.9e-80 301.2 164 80.5
Peaxi162Scf00212g00515 Petunia axillaris HOM05D004979 ORTHO05D006190 1.1e-79 300.1 166 80.1
Medtr1g110490 Medicago truncatula HOM05D004979 ORTHO05D006190 1.4e-79 299.7 165 80.0
SalBow5G4822 Salvia bowleyana HOM05D004979 ORTHO05D006190 1.9e-79 299.3 166 79.5
PGSC0003DMG400001886 Solanum tuberosum HOM05D004979 ORTHO05D006190 2.4e-79 298.9 165 80.0
arahy.Tifrunner.gnm1.ann1.4I4LKP Arachis hypogaea HOM05D004979 ORTHO05D006190 3.2e-79 298.5 165 80.0
RcHm_v2.0_Chr1g0332651 Rosa chinensis HOM05D004979 ORTHO05D006190 4.2e-79 298.1 164 79.3
Thecc.05G331000 Theobroma cacao HOM05D004979 ORTHO05D006190 4.2e-79 298.1 165 83.0
Glyma.20G116900 Glycine max HOM05D004979 ORTHO05D006190 9.3e-79 297.0 165 77.6
VMungo0720G1588 Vigna mungo HOM05D004979 ORTHO05D006190 9.3e-79 297.0 165 78.8
PSO170G1924 Papaver somniferum HOM05D004979 ORTHO05D006190 1.2e-78 296.6 164 79.9
PSO357G0276 Papaver somniferum HOM05D004979 ORTHO05D006190 1.2e-78 296.6 164 79.9
Psat6g226240 Pisum sativum HOM05D004979 ORTHO05D006190 2.1e-78 295.8 164 79.3
HanXRQChr11g0327151 Helianthus annuus HOM05D004979 ORTHO05D006190 2.7e-78 295.4 165 79.4
Solyc04g055190.4 Solanum lycopersicum HOM05D004979 ORTHO05D006190 2.7e-78 295.4 165 78.8
Sopen04g025050 Solanum pennellii HOM05D004979 ORTHO05D006190 2.7e-78 295.4 165 78.8
CAN.G1715.7 Capsicum annuum HOM05D004979 ORTHO05D006190 7.9e-78 293.9 166 78.9
DCAR_006591 Daucus carota HOM05D004979 ORTHO05D006190 7.9e-78 293.9 166 77.7
Lj5g0020513 Lotus japonicus HOM05D004979 ORTHO05D006190 7.9e-78 293.9 156 82.7
CANSAT56G2810 Cannabis sativa HOM05D004979 ORTHO05D006190 1.3e-77 293.1 166 80.7
Thhalv10023409m.g Eutrema salsugineum HOM05D004979 ORTHO05D006190 1.3e-77 293.1 159 78.6
Phvul.007G028500 Phaseolus vulgaris HOM05D004979 ORTHO05D006190 1.3e-77 293.1 165 77.6
Gohir.D13G003600 Gossypium hirsutum HOM05D004979 ORTHO05D006190 2.3e-77 292.4 164 81.1
Gorai.013G003500 Gossypium raimondii HOM05D004979 ORTHO05D006190 2.3e-77 292.4 164 81.1
ECA234G3247 Erigeron canadensis HOM05D004979 ORTHO05D006190 3.0e-77 292.0 165 78.2
Gohir.A13G003700 Gossypium hirsutum HOM05D004979 ORTHO05D006190 3.0e-77 292.0 164 81.1
Sed0004859 Sechium edule HOM05D004979 ORTHO05D006190 3.0e-77 292.0 166 77.1
Eucgr.I02672 Eucalyptus grandis HOM05D004979 ORTHO05D006190 5.1e-77 291.2 168 77.4
AL1G67180 Arabidopsis lyrata HOM05D004979 ORTHO05D006190 8.7e-77 290.4 165 74.5
Lsat_1_v5_gn_5_7121 Lactuca sativa HOM05D004979 ORTHO05D006190 1.5e-76 289.7 165 77.6
CARHR054720 Cardamine hirsuta HOM05D004979 ORTHO05D006190 4.3e-76 288.1 159 78.0
CsaV3_6G013140 Cucumis sativus L. HOM05D004979 ORTHO05D006190 9.6e-76 287.0 166 77.1
Sp2g05910 Schrenkiella parvula HOM05D004979 ORTHO05D006190 2.1e-75 285.8 159 77.4
SpUn0028_0030 Schrenkiella parvula HOM05D004979 ORTHO05D006190 2.1e-75 285.8 159 77.4
unitig_22.g6127 Utricularia gibba HOM05D004979 ORTHO05D006190 2.1e-75 285.8 166 73.5
Hund05397 Selenicereus undatus HOM05D004979 ORTHO05D006190 2.8e-75 285.4 165 73.9
arahy.Tifrunner.gnm1.ann1.Q958TZ Arachis hypogaea HOM05D004979 ORTHO05D006190 8.1e-75 283.9 196 67.9
EL10Ac8g20414 Beta vulgaris HOM05D004979 ORTHO05D006190 8.1e-75 283.9 165 75.8
THA.LOC104816839 Tarenaya hassleriana HOM05D004979 ORTHO05D006190 8.1e-75 283.9 159 76.7
MELO3C019579.2 Cucumis melo HOM05D004979 ORTHO05D006190 1.1e-74 283.5 165 76.4
AT1G57600 Arabidopsis thaliana HOM05D004979 ORTHO05D006190 1.4e-74 283.1 159 75.5
AUR62014845 Chenopodium quinoa HOM05D004979 ORTHO05D006190 1.8e-74 282.7 165 74.5
AUR62017041 Chenopodium quinoa HOM05D004979 ORTHO05D006190 1.8e-74 282.7 165 74.5
Haze_12430 Corylus avellana HOM05D004979 ORTHO05D006190 3.1e-74 282.0 196 67.9
BcaB07g31145 Brassica carinata HOM05D004979 ORTHO05D006190 4.0e-74 281.6 159 75.5
BcaC04g22085 Brassica carinata HOM05D004979 ORTHO05D006190 4.0e-74 281.6 159 76.1
BolC9t55284H Brassica oleracea HOM05D004979 ORTHO05D006190 4.0e-74 281.6 159 76.1
Carub.0002s0703 Capsella rubella HOM05D004979 ORTHO05D006190 4.0e-74 281.6 159 75.5
BraA09t37507Z Brassica rapa HOM05D004979 ORTHO05D006190 3.4e-73 278.5 159 74.8
Aa31LG2G11270 Aethionema arabicum HOM05D004979 ORTHO05D006190 1.3e-72 276.6 163 73.6
FAN23G0202 Fragaria x ananassa HOM05D004979 ORTHO05D006190 1.4e-71 273.1 148 80.4
Os05g0144000 Oryza sativa ssp. japonica HOM05D004979 ORTHO05D006190 2.5e-71 272.3 166 72.9
Nitab4.5_0000081g0190 Nicotiana tabacum HOM05D004979 ORTHO05D006190 3.2e-71 271.9 164 76.2
C09p23650 Brassica napus HOM05D004979 ORTHO05D006190 4.6e-70 268.1 183 66.1
Dinv22420 Davidia involucrata HOM05D004979 ORTHO05D006190 6.0e-70 267.7 192 66.7
Nn7g38157 Nelumbo nucifera HOM05D004979 ORTHO05D006190 1.0e-69 266.9 139 83.5
A09p18870 Brassica napus HOM05D004979 ORTHO05D006190 3.0e-69 265.4 184 65.2
Zm00001eb108680 Zea mays HOM05D004979 ORTHO05D006190 7.4e-68 260.8 166 71.1
SGA_v2.0_scaffold279G46769 Striga asiatica HOM05D004979 ORTHO05D006190 2.1e-67 259.2 172 70.3
HPP92_023772 Vanilla planifolia HOM05D004979 ORTHO05D006190 2.1e-67 259.2 164 68.9
SalBow3G2171 Salvia bowleyana HOM05D004979 ORTHO05D006190 4.8e-67 258.1 183 66.7
Duzib114G0072 Durio zibethinus HOM05D004979 ORTHO05D006190 1.4e-66 256.5 168 73.2
SEGI_04903 Sequoiadendron giganteum HOM05D004979 ORTHO05D006190 1.8e-66 256.1 166 66.9
CAN.G1164.35 Capsicum annuum HOM05D004979 ORTHO05D006190 2.4e-66 255.8 160 73.8
Lj9A238G55 Lonicera japonica HOM05D004979 ORTHO05D006190 1.2e-65 253.4 138 79.7
ATR0730G180 Amborella trichopoda HOM05D004979 ORTHO05D006190 2.6e-65 252.3 165 66.1
COL.COLO4_28214 Corchorus olitorius HOM05D004979 ORTHO05D006190 3.2e-63 245.4 142 81.7
Lj5C315T9 Lonicera japonica HOM05D004979 ORTHO05D006190 4.5e-57 224.9 113 85.8
FAN10G2429 Fragaria x ananassa HOM05D004979 ORTHO05D006190 7.2e-55 217.6 164 62.8
Pp3c2_38270 Physcomitrium patens HOM05D004979 ORTHO05D006190 5.1e-53 211.5 165 57.0
Mapoly0050s0014 Marchantia polymorpha HOM05D004979 ORTHO05D006190 4.3e-52 208.4 158 57.6
AagrBONN_evm.TU.Sc2ySwM_344.2018 Anthoceros agrestis HOM05D004979 ORTHO05D006190 9.7e-52 207.2 163 55.2
CBR_g16989 Chara braunii HOM05D004979 ORTHO05D006190 1.4e-50 203.4 167 52.1
SMO145G0201 Selaginella moellendorffii HOM05D004979 ORTHO05D006190 1.0e-48 197.2 172 54.7
TAR636G2920 Trochodendron aralioides HOM05D004979 ORTHO05D006190 1.1e-42 177.2 86 87.2
Sc05g0004380 Simmondsia chinensis HOM05D004979 ORTHO05D006190 6.5e-40 167.9 86 76.7
HanXRQChr14g0439781 Helianthus annuus HOM05D004979 ORTHO05D006190 9.4e-39 164.1 73 93.2
Cre14.g617150 Chlamydomonas reinhardtii HOM05D004979 ORTHO05D006190 2.6e-36 156.0 157 47.1
PRCOL_00000039 Prasinoderma coloniale HOM05D004979 ORTHO05D006190 1.4e-34 150.2 171 46.2
SHI20228 Sapria himalayana HOM05D004979 ORTHO05D006190 1.5e-31 140.2 135 51.9
QL03p011256 Quercus lobata HOM05D004979 ORTHO05D006190 1.9e-31 139.8 80 81.2
MCO11G558 Micromonas commoda HOM05D004979 ORTHO05D006190 1.2e-28 130.6 131 43.5
Cfa022844 Carpinus fangiana HOM05D004979 ORTHO05D006190 3.7e-27 125.6 181 38.7
Actinidia27722 Actinidia chinensis HOM05D004979 ORTHO05D006190 2.9e-24 115.9 67 82.1
Lsat_1_v5_gn_8_74721 Lactuca sativa HOM05D004979 ORTHO05D006190 3.8e-24 115.5 59 83.1
SHI32754 Sapria himalayana HOM05D001374 ORTHO05D004296 6.5e-24 114.8 112 49.1
Actinidia01657 Actinidia chinensis HOM05D004979 ORTHO05D006190 9.2e-18 94.4 53 84.9
Sc05g0003730 Simmondsia chinensis HOM05D004979 ORTHO05D006190 2.4e-10 69.7 80 46.2
Aqoxy2G02599 Aquilegia oxysepala HOM05D004979 ORTHO05D006190 2.7e-09 66.2 32 75.0
FAN23G1107 Fragaria x ananassa HOM05D003102 ORTHO05D005239 2.3e-08 63.2 44 63.6
CBR_g72775 Chara braunii HOM05D004979 ORTHO05D132771 3.3e-07 59.3 76 35.5


User provided reference genes

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