Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc46.177 Carica papaya HOM05D004690 ORTHO05D005527 3.7e-141 505.0 279 100.0
Thecc.09G151500 Theobroma cacao HOM05D004690 ORTHO05D005527 3.8e-93 345.5 279 69.5
CSS0047585 Camellia sinensis var. sinensis HOM05D004690 ORTHO05D005527 5.5e-92 341.7 283 67.1
CiPaw.15G165900 Carya illinoinensis HOM05D004690 ORTHO05D005527 7.1e-92 341.3 254 76.0
CSS0044573 Camellia sinensis var. sinensis HOM05D004690 ORTHO05D005527 3.5e-91 339.0 283 67.1
Manes.14G143400 Manihot esculenta HOM05D004690 ORTHO05D005527 4.6e-91 338.6 284 68.0
Cfa020803 Carpinus fangiana HOM05D004690 ORTHO05D005527 6.0e-91 338.2 283 68.9
CiPaw.16G107700 Carya illinoinensis HOM05D004690 ORTHO05D005527 6.0e-91 338.2 279 71.7
Eucgr.C02505 Eucalyptus grandis HOM05D004690 ORTHO05D005527 1.9e-89 333.2 295 67.5
COL.COLO4_23958 Corchorus olitorius HOM05D004690 ORTHO05D005527 3.3e-89 332.4 279 68.1
Prupe.7G265300 Prunus persica HOM05D004690 ORTHO05D005527 7.4e-89 331.3 284 67.3
PGR102G1430 Punica granatum HOM05D004690 ORTHO05D005527 1.3e-88 330.5 279 70.3
GSVIVG01023642001 Vitis vinifera HOM05D004690 ORTHO05D005527 1.6e-88 330.1 279 66.3
Ciclev10009165m.g Citrus clementina HOM05D004690 ORTHO05D005527 8.2e-88 327.8 285 65.6
Gohir.A07G037900 Gossypium hirsutum HOM05D004690 ORTHO05D005527 1.1e-87 327.4 281 67.3
Gohir.D07G042000 Gossypium hirsutum HOM05D004690 ORTHO05D005527 1.1e-87 327.4 281 67.3
Gorai.001G044800 Gossypium raimondii HOM05D004690 ORTHO05D005527 1.1e-87 327.4 281 67.3
Nn2g12436 Nelumbo nucifera HOM05D004690 ORTHO05D005527 1.1e-87 327.4 283 66.8
Potri.018G104000 Populus trichocarpa HOM05D004690 ORTHO05D005527 1.4e-87 327.0 283 65.7
arahy.Tifrunner.gnm1.ann1.RJ6BPE Arachis hypogaea HOM05D004690 ORTHO05D005527 3.4e-86 322.4 283 68.6
arahy.Tifrunner.gnm1.ann1.VFXC0H Arachis hypogaea HOM05D004690 ORTHO05D005527 1.0e-85 320.9 283 68.2
Phvul.003G154700 Phaseolus vulgaris HOM05D004690 ORTHO05D005527 2.9e-85 319.3 278 65.1
Dinv42835 Davidia involucrata HOM05D004690 ORTHO05D005527 6.5e-85 318.2 289 68.5
Dinv43264 Davidia involucrata HOM05D004690 ORTHO05D005527 6.5e-85 318.2 289 68.5
TAR383G0346 Trochodendron aralioides HOM05D004690 ORTHO05D005527 6.5e-85 318.2 286 68.5
TWI63G1092 Tripterygium wilfordii HOM05D004690 ORTHO05D005527 1.9e-84 316.6 285 65.3
MD02G1005700 Malus domestica HOM05D004690 ORTHO05D005527 4.2e-84 315.5 288 64.6
CANSAT11G0185 Cannabis sativa HOM05D004690 ORTHO05D005527 1.6e-83 313.5 290 64.1
Hma1.2p1_0028F.1_g017650 Hydrangea macrophylla HOM05D004690 ORTHO05D005527 7.9e-83 311.2 287 61.3
Sed0014938 Sechium edule HOM05D004690 ORTHO05D005527 1.0e-82 310.8 296 60.1
Sed0017216 Sechium edule HOM05D004690 ORTHO05D005527 3.9e-82 308.9 299 61.9
VMungo1215G2193 Vigna mungo HOM05D004690 ORTHO05D005527 5.1e-82 308.5 281 63.0
CsaV3_2G007620 Cucumis sativus L. HOM05D004690 ORTHO05D005527 1.9e-81 306.6 306 58.5
Haze_19160 Corylus avellana HOM05D004690 ORTHO05D005527 5.7e-81 305.1 317 59.0
Sp4g02970 Schrenkiella parvula HOM05D004690 ORTHO05D005527 5.7e-81 305.1 283 63.6
MSTRG.10705 Avicennia marina HOM05D004690 ORTHO05D005527 9.7e-81 304.3 281 63.7
Thhalv10000269m.g Eutrema salsugineum HOM05D004690 ORTHO05D005527 3.7e-80 302.4 279 64.5
CARHR118290 Cardamine hirsuta HOM05D004690 ORTHO05D005527 4.8e-80 302.0 284 61.3
BcaC02g08501 Brassica carinata HOM05D004690 ORTHO05D005527 6.3e-80 301.6 279 64.5
Carub.0004s0323 Capsella rubella HOM05D004690 ORTHO05D005527 1.4e-79 300.4 281 64.4
AL4G14110 Arabidopsis lyrata HOM05D004690 ORTHO05D005527 1.8e-79 300.1 282 60.6
BcaB06g27964 Brassica carinata HOM05D004690 ORTHO05D005527 2.4e-79 299.7 276 64.9
A04p18380 Brassica napus HOM05D004690 ORTHO05D005527 6.9e-79 298.1 279 64.5
BolC4t26921H Brassica oleracea HOM05D004690 ORTHO05D005527 1.5e-78 297.0 280 64.3
C04p53650 Brassica napus HOM05D004690 ORTHO05D005527 2.0e-78 296.6 279 64.5
BcaNung02747 Brassica carinata HOM05D004690 ORTHO05D005527 3.4e-78 295.8 284 65.1
C07p58160 Brassica napus HOM05D004690 ORTHO05D005527 3.4e-78 295.8 284 65.1
BolC7t46275H Brassica oleracea HOM05D004690 ORTHO05D005527 3.4e-78 295.8 284 65.1
BraA04t17449Z Brassica rapa HOM05D004690 ORTHO05D005527 3.4e-78 295.8 278 64.4
Hma1.2p1_0222F.1_g093770 Hydrangea macrophylla HOM05D004690 ORTHO05D005527 5.9e-78 295.0 302 59.6
Lj4g0007308 Lotus japonicus HOM05D004690 ORTHO05D005527 5.9e-78 295.0 286 60.8
RcHm_v2.0_Chr2g0085411 Rosa chinensis HOM05D004690 ORTHO05D005527 1.0e-77 294.3 286 60.1
Aa31LG7G12770 Aethionema arabicum HOM05D004690 ORTHO05D005527 2.2e-77 293.1 286 60.8
Atru.chr7.16 Acer truncatum HOM05D004690 ORTHO05D005527 3.8e-77 292.4 212 77.8
AT2G24060 Arabidopsis thaliana HOM05D004690 ORTHO05D005527 3.8e-77 292.4 276 60.5
FvH4_1g00690 Fragaria vesca HOM05D004690 ORTHO05D005527 5.0e-77 292.0 283 58.3
THA.LOC104803547 Tarenaya hassleriana HOM05D004690 ORTHO05D005527 5.0e-77 292.0 285 61.4
A03p60250 Brassica napus HOM05D004690 ORTHO05D005527 1.1e-76 290.8 283 63.6
ClCG02G014380 Citrullus lanatus HOM05D004690 ORTHO05D005527 1.9e-76 290.0 303 57.8
BraA03t15065Z Brassica rapa HOM05D004690 ORTHO05D005527 2.5e-76 289.7 284 64.1
Sp7g28600 Schrenkiella parvula HOM05D004690 ORTHO05D005527 2.5e-76 289.7 268 65.3
MD15G1150400 Malus domestica HOM05D004690 ORTHO05D005527 3.2e-76 289.3 221 71.0
ATR0019G027 Amborella trichopoda HOM05D004690 ORTHO05D005527 5.5e-76 288.5 209 78.5
CARHR238570 Cardamine hirsuta HOM05D004690 ORTHO05D005527 7.2e-76 288.1 284 62.3
Migut.K00308 Erythranthe guttata HOM05D004690 ORTHO05D005527 1.6e-75 287.0 279 59.5
PGSC0003DMG400011147 Solanum tuberosum HOM05D004690 ORTHO05D005527 7.9e-75 284.6 283 60.8
FAN26G1928 Fragaria x ananassa HOM05D004690 ORTHO05D005527 1.0e-74 284.3 285 57.2
Glyma.02G205700 Glycine max HOM05D004690 ORTHO05D005527 2.3e-74 283.1 285 61.8
HanXRQChr10g0307591 Helianthus annuus HOM05D004690 ORTHO05D005527 2.3e-74 283.1 234 68.8
Solyc07g005830.3 Solanum lycopersicum HOM05D004690 ORTHO05D005527 3.9e-74 282.3 282 61.0
Sopen07g001930 Solanum pennellii HOM05D004690 ORTHO05D005527 3.9e-74 282.3 282 61.0
AT4G30690 Arabidopsis thaliana HOM05D004690 ORTHO05D005527 1.1e-73 280.8 268 63.4
Lsat_1_v5_gn_8_63881 Lactuca sativa HOM05D004690 ORTHO05D005527 2.0e-73 280.0 225 71.1
MELO3C004125.2 Cucumis melo HOM05D004690 ORTHO05D005527 2.6e-73 279.6 304 56.2
Lsat_1_v5_gn_5_89380 Lactuca sativa HOM05D004690 ORTHO05D005527 9.7e-73 277.7 278 58.6
Sabra18G0089400 Salix brachista HOM05D004690 ORTHO05D005527 1.7e-72 276.9 286 58.0
Glyma.17G072300 Glycine max HOM05D004690 ORTHO05D005527 2.2e-72 276.6 281 58.7
Cc06_g14700 Coffea canephora HOM05D004690 ORTHO05D005527 3.7e-72 275.8 280 61.1
Lalb_Chr12g0198781 Lupinus albus HOM05D004690 ORTHO05D005527 6.3e-72 275.0 252 59.9
HanXRQChr05g0138951 Helianthus annuus HOM05D004690 ORTHO05D005527 8.2e-72 274.6 204 76.5
Medtr4g130530 Medicago truncatula HOM05D004690 ORTHO05D005527 5.3e-71 271.9 255 62.0
Sc18g0003050 Simmondsia chinensis HOM05D004690 ORTHO05D005527 5.3e-71 271.9 295 60.7
Ah.09g228780 Amaranthus hybridus HOM05D004690 ORTHO05D005527 9.1e-71 271.2 292 61.0
Potri.006G182000 Populus trichocarpa HOM05D004690 ORTHO05D005527 1.2e-70 270.8 217 68.7
SGA_v2.0_scaffold63G21785 Striga asiatica HOM05D004690 ORTHO05D005527 1.2e-70 270.8 295 53.9
Peaxi162Scf00401g00330 Petunia axillaris HOM05D004690 ORTHO05D005527 2.0e-70 270.0 285 59.6
unitig_899.g15465 Utricularia gibba HOM05D004690 ORTHO05D005527 2.0e-70 270.0 266 60.9
Glyma.04G154000 Glycine max HOM05D004690 ORTHO05D005527 3.4e-70 269.2 200 69.0
FAN28G2863 Fragaria x ananassa HOM05D004690 ORTHO05D005527 1.0e-69 267.7 283 55.8
Thhalv10025935m.g Eutrema salsugineum HOM05D004690 ORTHO05D005527 1.7e-69 266.9 281 60.1
Psat7g006440 Pisum sativum HOM05D004690 ORTHO05D005527 3.8e-69 265.8 261 57.9
Aqoxy7G03362 Aquilegia oxysepala HOM05D004690 ORTHO05D005527 5.0e-69 265.4 290 60.3
AL7G21430 Arabidopsis lyrata HOM05D004690 ORTHO05D005527 5.0e-69 265.4 271 61.3
ECA236G1766 Erigeron canadensis HOM05D004690 ORTHO05D005527 8.5e-69 264.6 218 70.2
ECA234G3490 Erigeron canadensis HOM05D004690 ORTHO05D005527 3.2e-68 262.7 274 59.1
DCAR_017916 Daucus carota HOM05D004690 ORTHO05D005527 7.2e-68 261.5 262 60.3
BcaNung04824 Brassica carinata HOM05D004690 ORTHO05D005527 1.2e-67 260.8 183 79.2
QL02p093831 Quercus lobata HOM05D004690 ORTHO05D005527 7.9e-67 258.1 241 66.4
SalBow1G0331 Salvia bowleyana HOM05D004690 ORTHO05D005527 7.9e-67 258.1 280 54.3
FAN23G2407 Fragaria x ananassa HOM05D004690 ORTHO05D005527 1.0e-66 257.7 282 55.0
FAN23G2925 Fragaria x ananassa HOM05D004690 ORTHO05D005527 1.0e-66 257.7 282 55.0
vmacro16787 Vaccinium macrocarpon HOM05D004690 ORTHO05D005527 3.0e-66 256.1 338 49.1
EL10Ac8g18927 Beta vulgaris HOM05D004690 ORTHO05D005527 4.4e-65 252.3 288 55.9
Rhsim01G0027300 Rhododendron simsii HOM05D004690 ORTHO05D005527 1.3e-64 250.8 292 53.8
Aa31LG2G19730 Aethionema arabicum HOM05D004690 ORTHO05D005527 1.7e-64 250.4 284 53.9
PSO111G0014 Papaver somniferum HOM05D004690 ORTHO05D005527 4.8e-64 248.8 277 56.7
MBI15_g27186_MAGBIO Magnolia biondii HOM05D004690 ORTHO05D005527 1.1e-63 247.7 284 55.6
PSO782G2525 Papaver somniferum HOM05D004690 ORTHO05D005527 1.1e-63 247.7 277 56.3
CAN.G160.27 Capsicum annuum HOM05D004690 ORTHO05D005527 4.5e-62 242.3 171 79.5
Nitab4.5_0002611g0030 Nicotiana tabacum HOM05D004690 ORTHO05D005527 5.9e-62 241.9 171 74.9
Lj7C462G3 Lonicera japonica HOM05D000062 ORTHO05D000043 3.2e-60 236.1 203 65.5
Oeu054265.1 Olea europaea HOM05D004690 ORTHO05D005527 1.2e-59 234.2 151 77.5
CDE02G3377 Ceratophyllum demersum HOM05D004690 ORTHO05D005527 2.1e-59 233.4 254 57.1
HPP92_018341 Vanilla planifolia HOM05D004690 ORTHO05D005527 2.7e-59 233.0 222 60.4
Duzib150G0069 Durio zibethinus HOM05D004690 ORTHO05D005527 1.0e-58 231.1 279 53.4
Hund08935 Selenicereus undatus HOM05D004690 ORTHO05D005527 5.2e-58 228.8 287 51.2
AUR62025348 Chenopodium quinoa HOM05D004690 ORTHO05D005527 5.7e-57 225.3 287 49.8
AUR62028351 Chenopodium quinoa HOM05D004690 ORTHO05D005527 7.5e-57 224.9 288 49.7
Zm00001eb257720 Zea mays HOM05D004690 ORTHO05D005527 1.2e-54 217.6 186 60.8
Os02g0794400 Oryza sativa ssp. japonica HOM05D004690 ORTHO05D005527 4.2e-52 209.1 184 63.0
CDE05G2888 Ceratophyllum demersum HOM05D004690 ORTHO05D005527 1.8e-50 203.8 187 59.4
Nn8g39977 Nelumbo nucifera HOM05D004690 ORTHO05D005527 8.3e-48 194.9 136 72.1
Mapoly0090s0068 Marchantia polymorpha HOM05D004690 ORTHO05D005527 5.9e-46 188.7 181 54.1
Manes.06G030800 Manihot esculenta HOM05D004690 ORTHO05D005527 3.2e-44 183.0 109 85.3
AagrBONN_evm.TU.Sc2ySwM_228.3886 Anthoceros agrestis HOM05D004690 ORTHO05D005527 4.7e-43 179.1 172 55.8
Aa31LG3G8690 Aethionema arabicum HOM05D004690 ORTHO05D005527 8.8e-42 174.9 114 74.6
Pp3c2_19940 Physcomitrium patens HOM05D004690 ORTHO05D005527 3.4e-41 172.9 219 48.4
CBR_g7972 Chara braunii HOM05D004690 ORTHO05D005527 2.8e-40 169.9 206 47.6
Ca_21146_v3 Cicer arietinum L. HOM05D004690 ORTHO05D005527 6.3e-40 168.7 104 77.9
Pp3c14_5800 Physcomitrium patens HOM05D004690 ORTHO05D005527 1.4e-39 167.5 215 47.0
SMO353G0310 Selaginella moellendorffii HOM05D004690 ORTHO05D005527 1.0e-34 151.4 244 39.8
Actinidia24377 Actinidia chinensis HOM05D004690 ORTHO05D005527 1.4e-34 151.0 104 76.9
MCO15G501 Micromonas commoda HOM05D004690 ORTHO05D005527 4.0e-34 149.4 179 44.7
Actinidia38313 Actinidia chinensis HOM05D004690 ORTHO05D005527 7.0e-31 138.7 234 43.6
PRCOL_00002519 Prasinoderma coloniale HOM05D004690 ORTHO05D005527 5.0e-29 132.5 171 42.1
PGSC0003DMG400017027 Solanum tuberosum HOM05D004690 ORTHO05D005527 5.2e-26 122.5 68 86.8
Carub.0007s0984 Capsella rubella HOM05D004690 ORTHO05D005527 2.6e-25 120.2 180 49.4
Hma1.2p1_0028F.1_g017670 Hydrangea macrophylla HOM05D004690 ORTHO05D005527 2.6e-25 120.2 156 51.3
Lsat_1_v5_gn_2_57160 Lactuca sativa HOM05D003492 ORTHO05D022499 4.9e-24 115.9 85 64.7
SEGI_13735 Sequoiadendron giganteum HOM05D004690 ORTHO05D005527 8.3e-24 115.2 123 49.6
Nn8g39976 Nelumbo nucifera HOM05D004690 ORTHO05D005527 1.6e-22 110.9 143 53.8
HanXRQChr10g0314901 Helianthus annuus HOM05D000214 ORTHO05D000131 3.6e-19 99.8 80 62.5
Cfa021053 Carpinus fangiana HOM05D004690 ORTHO05D005527 3.1e-18 96.7 159 34.6
Cre01.g001550 Chlamydomonas reinhardtii HOM05D004690 ORTHO05D005527 1.4e-15 87.8 147 34.0
Dinv41359 Davidia involucrata HOM05D004690 ORTHO05D005527 3.5e-14 83.2 74 74.3
BcaB06g27963 Brassica carinata HOM05D004690 ORTHO05D005527 6.0e-14 82.4 71 59.2
SEGI_33455 Sequoiadendron giganteum HOM05D004690 ORTHO05D005527 3.9e-13 79.7 147 43.5
Ca_21142_v3 Cicer arietinum L. HOM05D004690 ORTHO05D005527 2.5e-12 77.0 132 47.0
A02p43620 Brassica napus HOM05D004690 ORTHO05D005527 7.6e-09 65.5 44 68.2
A02p43630 Brassica napus HOM05D004690 ORTHO05D005527 7.6e-09 65.5 44 68.2
Oeu054266.1 Olea europaea HOM05D004690 ORTHO05D005527 3.8e-08 63.2 120 41.7
FAN23G1872 Fragaria x ananassa HOM05D004690 ORTHO05D005527 6.4e-08 62.4 134 39.6
CBR_g29438 Chara braunii HOM05D005442 ORTHO05D006450 1.9e-07 60.8 117 31.6
BolC2t11481H Brassica oleracea HOM05D004690 ORTHO05D005527 2.4e-07 60.5 38 73.7
Aa31LG8G14120 Aethionema arabicum HOM05D005442 ORTHO05D006450 4.1e-07 59.7 227 24.7
Pp3c27_2790 Physcomitrium patens HOM05D005442 ORTHO05D006450 5.4e-07 59.3 180 25.6
Medtr7g017820 Medicago truncatula HOM05D004690 ORTHO05D005527 9.2e-07 58.5 70 47.1
THA.LOC104807379 Tarenaya hassleriana HOM05D005442 ORTHO05D006450 1.6e-06 57.8 220 26.8
C06p03190 Brassica napus HOM05D004690 ORTHO05D005527 3.5e-06 56.6 37 70.3
CDE04G0468 Ceratophyllum demersum HOM05D005442 ORTHO05D000996 6.0e-06 55.8 182 26.9


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