Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc46.167 Carica papaya HOM05D004106 ORTHO05D004381 3.8e-97 358.2 187 100.0
Duzib168G0532 Durio zibethinus HOM05D004106 ORTHO05D004381 3.4e-74 282.0 195 82.1
Atru.chr7.22 Acer truncatum HOM05D004106 ORTHO05D004381 5.9e-74 281.2 194 82.5
Ciclev10009489m.g Citrus clementina HOM05D004106 ORTHO05D004381 3.2e-72 275.4 194 82.5
Gohir.A07G027300 Gossypium hirsutum HOM05D004106 ORTHO05D004381 7.2e-72 274.2 196 80.6
Gorai.001G032700 Gossypium raimondii HOM05D004106 ORTHO05D004381 7.2e-72 274.2 196 80.6
Potri.018G105600 Populus trichocarpa HOM05D004106 ORTHO05D004381 7.2e-72 274.2 198 77.8
COL.COLO4_18821 Corchorus olitorius HOM05D004106 ORTHO05D004381 5.7e-69 264.6 196 77.6
Gohir.A05G053000 Gossypium hirsutum HOM05D004106 ORTHO05D004381 3.7e-68 261.9 196 75.5
THA.LOC104819993 Tarenaya hassleriana HOM05D004106 ORTHO05D004381 6.3e-68 261.2 189 79.4
Gohir.D05G054601 Gossypium hirsutum HOM05D004106 ORTHO05D004381 1.4e-67 260.0 196 75.0
Gorai.009G056300 Gossypium raimondii HOM05D004106 ORTHO05D004381 1.4e-67 260.0 196 75.0
TAR626G0743 Trochodendron aralioides HOM05D004106 ORTHO05D004381 2.4e-67 259.2 197 76.1
THA.LOC104803919 Tarenaya hassleriana HOM05D004106 ORTHO05D004381 3.1e-67 258.8 191 79.6
PSO384G4038 Papaver somniferum HOM05D004106 ORTHO05D004381 4.1e-67 258.5 198 73.2
PSO339G2511 Papaver somniferum HOM05D004106 ORTHO05D004381 7.0e-67 257.7 198 73.2
TAR383G0918 Trochodendron aralioides HOM05D004106 ORTHO05D004381 3.5e-66 255.4 194 76.3
Actinidia14131 Actinidia chinensis HOM05D004106 ORTHO05D004381 4.5e-66 255.0 195 71.8
Manes.14G144700 Manihot esculenta HOM05D004106 ORTHO05D004381 2.2e-65 252.7 197 74.6
arahy.Tifrunner.gnm1.ann1.J1V5JT Arachis hypogaea HOM05D004106 ORTHO05D004381 6.5e-65 251.1 198 73.2
Glyma.12G156200 Glycine max HOM05D004106 ORTHO05D004381 8.5e-65 250.8 198 73.2
Dinv08178 Davidia involucrata HOM05D004106 ORTHO05D004381 5.5e-64 248.1 197 72.6
EL10Ac2g02497 Beta vulgaris HOM05D004106 ORTHO05D004381 7.2e-64 247.7 201 69.7
Dinv08223 Davidia involucrata HOM05D004106 ORTHO05D004381 7.2e-64 247.7 196 74.5
QL02p093501 Quercus lobata HOM05D004106 ORTHO05D004381 9.4e-64 247.3 197 73.1
GSVIVG01023623001 Vitis vinifera HOM05D004106 ORTHO05D004381 1.2e-63 246.9 198 73.2
Duzib150G0841 Durio zibethinus HOM05D004106 ORTHO05D004381 2.1e-63 246.1 192 73.4
arahy.Tifrunner.gnm1.ann1.U84FQB Arachis hypogaea HOM05D004106 ORTHO05D004381 2.7e-63 245.7 198 72.2
MBI15_g18237_MAGBIO Magnolia biondii HOM05D004106 ORTHO05D004381 3.6e-63 245.4 198 70.7
Hund02987 Selenicereus undatus HOM05D004106 ORTHO05D004381 1.0e-62 243.8 158 82.9
Glyma.06G225800 Glycine max HOM05D004106 ORTHO05D004381 1.4e-62 243.4 144 89.6
ATR0580G427 Amborella trichopoda HOM05D004106 ORTHO05D004381 5.2e-62 241.5 195 70.3
CiPaw.15G167000 Carya illinoinensis HOM05D004106 ORTHO05D004381 5.2e-62 241.5 162 82.1
TWI63G0696 Tripterygium wilfordii HOM05D004106 ORTHO05D004381 5.2e-62 241.5 200 70.5
VMungo1080G0447 Vigna mungo HOM05D004106 ORTHO05D004381 5.2e-62 241.5 198 71.2
Medtr0380s0040 Medicago truncatula HOM05D004106 ORTHO05D004381 6.7e-62 241.1 178 74.2
Cc06_g14830 Coffea canephora HOM05D004106 ORTHO05D004381 8.8e-62 240.7 194 72.2
CsaV3_1G029020 Cucumis sativus L. HOM05D004106 ORTHO05D004381 8.8e-62 240.7 194 72.7
CANSAT11G1220 Cannabis sativa HOM05D004106 ORTHO05D004381 1.1e-61 240.4 188 72.3
CSS0032495 Camellia sinensis var. sinensis HOM05D004106 ORTHO05D004381 2.0e-61 239.6 143 88.1
ClCG06G012460 Citrullus lanatus HOM05D004106 ORTHO05D004381 4.4e-61 238.4 142 88.7
Phvul.005G005700 Phaseolus vulgaris HOM05D004106 ORTHO05D004381 4.4e-61 238.4 198 70.7
Aa31LG2G19880 Aethionema arabicum HOM05D004106 ORTHO05D004381 9.7e-61 237.3 189 74.1
Oeu006863.1 Olea europaea HOM05D004106 ORTHO05D004381 9.7e-61 237.3 167 79.0
CAN.G551.46 Capsicum annuum HOM05D004106 ORTHO05D004381 1.3e-60 236.9 187 72.7
Sp7g28490 Schrenkiella parvula HOM05D004106 ORTHO05D004381 1.7e-60 236.5 157 83.4
AL4G14070 Arabidopsis lyrata HOM05D004106 ORTHO05D004381 2.8e-60 235.7 187 72.7
Prupe.1G394300 Prunus persica HOM05D004106 ORTHO05D004381 2.8e-60 235.7 189 72.0
Solyc12g009980.2 Solanum lycopersicum HOM05D004106 ORTHO05D004381 3.7e-60 235.3 189 72.5
HPP92_004701 Vanilla planifolia HOM05D004106 ORTHO05D004381 3.7e-60 235.3 155 80.6
AT4G30620 Arabidopsis thaliana HOM05D004106 ORTHO05D004381 4.8e-60 235.0 159 82.4
Lj6g0027633 Lotus japonicus HOM05D004106 ORTHO05D004381 6.3e-60 234.6 149 81.9
Hund25620 Selenicereus undatus HOM05D004106 ORTHO05D004381 6.3e-60 234.6 180 73.9
MBI14_g09102_MAGBIO Magnolia biondii HOM05D004106 ORTHO05D004381 8.2e-60 234.2 182 72.5
Lalb_Chr07g0179881 Lupinus albus HOM05D004106 ORTHO05D004381 1.1e-59 233.8 198 68.2
Ca_21133_v3 Cicer arietinum L. HOM05D004106 ORTHO05D004381 1.8e-59 233.0 168 76.8
Sed0000106 Sechium edule HOM05D004106 ORTHO05D004381 3.1e-59 232.3 196 70.4
Oeu048547.1 Olea europaea HOM05D004106 ORTHO05D004381 5.3e-59 231.5 197 68.5
C08p39590 Brassica napus HOM05D004106 ORTHO05D004381 7.0e-59 231.1 190 71.1
BolC8t51532H Brassica oleracea HOM05D004106 ORTHO05D004381 7.0e-59 231.1 190 71.1
PGSC0003DMG400007906 Solanum tuberosum HOM05D004106 ORTHO05D004381 9.1e-59 230.7 187 71.7
A09p56640 Brassica napus HOM05D004106 ORTHO05D004381 1.2e-58 230.3 190 71.1
BraA09t41055Z Brassica rapa HOM05D004106 ORTHO05D004381 1.2e-58 230.3 190 71.1
Carub.0004s0318 Capsella rubella HOM05D004106 ORTHO05D004381 1.2e-58 230.3 167 75.4
Psat1g022480 Pisum sativum HOM05D004106 ORTHO05D004381 1.2e-58 230.3 145 84.8
Sp4g02930 Schrenkiella parvula HOM05D004106 ORTHO05D004381 1.2e-58 230.3 188 71.8
AT2G24020 Arabidopsis thaliana HOM05D004106 ORTHO05D004381 1.6e-58 229.9 187 70.6
A08p19160 Brassica napus HOM05D004106 ORTHO05D004381 1.6e-58 229.9 187 70.1
FAN27G3303 Fragaria x ananassa HOM05D004106 ORTHO05D004381 2.0e-58 229.6 195 68.2
Prupe.7G264300 Prunus persica HOM05D004106 ORTHO05D004381 2.0e-58 229.6 158 79.7
Sopen12g004850 Solanum pennellii HOM05D004106 ORTHO05D004381 3.5e-58 228.8 192 70.3
Thhalv10000343m.g Eutrema salsugineum HOM05D004106 ORTHO05D004381 4.5e-58 228.4 182 71.4
HanXRQChr03g0065371 Helianthus annuus HOM05D004106 ORTHO05D004381 4.5e-58 228.4 191 69.6
MD08G1056000 Malus domestica HOM05D004106 ORTHO05D004381 5.9e-58 228.0 190 70.0
Sabra18G0090100 Salix brachista HOM05D004106 ORTHO05D004381 5.9e-58 228.0 198 68.7
Eucgr.C02535 Eucalyptus grandis HOM05D004106 ORTHO05D004381 7.7e-58 227.6 178 71.3
TWI34G1622 Tripterygium wilfordii HOM05D004106 ORTHO05D004381 7.7e-58 227.6 196 67.9
AL7G21520 Arabidopsis lyrata HOM05D004106 ORTHO05D004381 1.0e-57 227.3 191 71.2
Eucgr.C02498 Eucalyptus grandis HOM05D004106 ORTHO05D004381 1.0e-57 227.3 178 70.8
FvH4_2g41160 Fragaria vesca HOM05D004106 ORTHO05D004381 1.0e-57 227.3 195 67.7
BcaB03g12652 Brassica carinata HOM05D004106 ORTHO05D004381 1.7e-57 226.5 156 80.1
CARHR184720 Cardamine hirsuta HOM05D004106 ORTHO05D004381 1.7e-57 226.5 188 71.8
BraA08t33877Z Brassica rapa HOM05D004106 ORTHO05D004381 2.2e-57 226.1 156 80.8
Migut.E01458 Erythranthe guttata HOM05D004106 ORTHO05D004381 2.2e-57 226.1 163 78.5
FAN15G2986 Fragaria x ananassa HOM05D004106 ORTHO05D004381 2.2e-57 226.1 195 67.7
BcaC07g40965 Brassica carinata HOM05D004106 ORTHO05D004381 2.9e-57 225.7 189 68.8
Lsat_1_v5_gn_7_50001 Lactuca sativa HOM05D004106 ORTHO05D004381 2.9e-57 225.7 202 66.8
SGA_v2.0_scaffold4G02174 Striga asiatica HOM05D004106 ORTHO05D004381 2.9e-57 225.7 190 72.1
PGR102G1248 Punica granatum HOM05D004106 ORTHO05D004381 3.8e-57 225.3 196 66.3
vmacro06074 Vaccinium macrocarpon HOM05D004106 ORTHO05D004381 3.8e-57 225.3 194 64.9
Nitab4.5_0003563g0010 Nicotiana tabacum HOM05D004106 ORTHO05D004381 6.5e-57 224.6 143 84.6
Migut.K00317 Erythranthe guttata HOM05D004106 ORTHO05D004381 8.5e-57 224.2 188 68.1
RcHm_v2.0_Chr6g0299371 Rosa chinensis HOM05D004106 ORTHO05D004381 8.5e-57 224.2 188 69.7
Os02g0180200 Oryza sativa ssp. japonica HOM05D004106 ORTHO05D004381 1.1e-56 223.8 142 82.4
Thhalv10026346m.g Eutrema salsugineum HOM05D004106 ORTHO05D004381 1.5e-56 223.4 158 79.7
Lalb_Chr13g0300831 Lupinus albus HOM05D004106 ORTHO05D004381 1.5e-56 223.4 205 65.9
MSTRG.1632 Avicennia marina HOM05D004106 ORTHO05D004381 2.5e-56 222.6 161 77.0
Nitab4.5_0002011g0110 Nicotiana tabacum HOM05D004106 ORTHO05D004381 2.5e-56 222.6 139 84.9
Medtr4g130730 Medicago truncatula HOM05D004106 ORTHO05D004381 3.2e-56 222.2 148 79.1
Solyc08g006780.3 Solanum lycopersicum HOM05D004106 ORTHO05D004381 3.2e-56 222.2 170 73.5
BolC3t21168H Brassica oleracea HOM05D004106 ORTHO05D004381 4.2e-56 221.9 189 69.3
Peaxi162Scf00062g00225 Petunia axillaris HOM05D004106 ORTHO05D004381 4.2e-56 221.9 141 83.0
Lj4g0010746 Lotus japonicus HOM05D004106 ORTHO05D004381 5.5e-56 221.5 197 67.5
TWI32G0932 Tripterygium wilfordii HOM05D004106 ORTHO05D004381 5.5e-56 221.5 149 82.6
ECA240G3283 Erigeron canadensis HOM05D004106 ORTHO05D004381 7.2e-56 221.1 190 68.4
Sopen08g002730 Solanum pennellii HOM05D004106 ORTHO05D004381 7.2e-56 221.1 170 72.9
TPR.G3593 Trifolium pratense HOM05D004106 ORTHO05D004381 9.4e-56 220.7 170 72.4
Peaxi162Scf00045g02039 Petunia axillaris HOM05D004106 ORTHO05D004381 2.7e-55 219.2 166 77.1
HanXRQChr09g0244601 Helianthus annuus HOM05D004106 ORTHO05D004381 3.6e-55 218.8 141 83.0
unitig_749.g13818 Utricularia gibba HOM05D004106 ORTHO05D004381 6.1e-55 218.0 140 83.6
PGSC0003DMG400026299 Solanum tuberosum HOM05D004106 ORTHO05D004381 1.4e-54 216.9 170 71.2
Carub.0007s0995 Capsella rubella HOM05D004106 ORTHO05D004381 2.3e-54 216.1 191 70.7
Ah.10g025490 Amaranthus hybridus HOM05D004106 ORTHO05D004381 5.2e-54 214.9 175 72.6
Zm00001eb206700 Zea mays HOM05D004106 ORTHO05D004381 5.2e-54 214.9 140 81.4
TPR.G24849 Trifolium pratense HOM05D004106 ORTHO05D004381 6.8e-54 214.5 146 80.8
CDE05G2988 Ceratophyllum demersum HOM05D004106 ORTHO05D004381 8.8e-54 214.2 146 79.5
Manes.03G008200 Manihot esculenta HOM05D004106 ORTHO05D004381 1.2e-53 213.8 175 70.3
Thecc.09G028700 Theobroma cacao HOM05D004106 ORTHO05D004381 1.5e-53 213.4 165 75.8
Actinidia23107 Actinidia chinensis HOM05D004106 ORTHO05D004381 4.4e-53 211.8 186 68.3
Cfa013048 Carpinus fangiana HOM05D004106 ORTHO05D004381 5.7e-53 211.5 162 74.7
CDE02G1701 Ceratophyllum demersum HOM05D004106 ORTHO05D004381 5.7e-53 211.5 199 64.8
CAN.G353.7 Capsicum annuum HOM05D004106 ORTHO05D004381 7.5e-53 211.1 170 71.2
MD15G1041000 Malus domestica HOM05D004106 ORTHO05D004381 1.7e-52 209.9 190 63.7
C03p88620 Brassica napus HOM05D004106 ORTHO05D004381 2.8e-52 209.1 182 69.2
SalBow1G1642 Salvia bowleyana HOM05D004106 ORTHO05D004381 2.8e-52 209.1 194 64.4
Aqoxy7G02301 Aquilegia oxysepala HOM05D004106 ORTHO05D004381 1.4e-51 206.8 115 92.2
Aqoxy7G02464 Aquilegia oxysepala HOM05D004106 ORTHO05D004381 3.1e-51 205.7 154 73.4
Aa31LG7G12810 Aethionema arabicum HOM05D004106 ORTHO05D004381 2.0e-50 203.0 211 61.1
Haze_21409 Corylus avellana HOM05D004106 ORTHO05D004381 2.7e-50 202.6 112 93.8
Psat4g009640 Pisum sativum HOM05D004106 ORTHO05D004381 5.9e-50 201.4 163 68.1
BcaC01g01145 Brassica carinata HOM05D004106 ORTHO05D004381 1.3e-49 200.3 113 92.9
MELO3C010214.2 Cucumis melo HOM05D004106 ORTHO05D004381 1.3e-49 200.3 173 68.2
AUR62024802 Chenopodium quinoa HOM05D004106 ORTHO05D004381 1.7e-49 199.9 115 90.4
AUR62032418 Chenopodium quinoa HOM05D004106 ORTHO05D004381 1.7e-49 199.9 115 90.4
vmacro05152 Vaccinium macrocarpon HOM05D004106 ORTHO05D004381 6.5e-49 198.0 204 59.3
Lalb_Chr12g0198731 Lupinus albus HOM05D004106 ORTHO05D004381 4.2e-48 195.3 113 89.4
Nn8g39925 Nelumbo nucifera HOM05D004106 ORTHO05D004381 1.8e-46 189.9 199 60.3
Nitab4.5_0008875g0050 Nicotiana tabacum HOM05D004106 ORTHO05D004381 2.3e-46 189.5 188 61.2
Nitab4.5_0002891g0090 Nicotiana tabacum HOM05D004106 ORTHO05D004381 5.2e-46 188.3 188 60.6
FAN20G0773 Fragaria x ananassa HOM05D004106 ORTHO05D004381 1.7e-44 183.3 195 58.5
CANSAT54G0776 Cannabis sativa HOM05D004106 ORTHO05D004381 2.8e-44 182.6 146 69.9
Mapoly0031s0030 Marchantia polymorpha HOM05D004106 ORTHO05D004381 3.7e-44 182.2 137 68.6
Haze_19171 Corylus avellana HOM05D004106 ORTHO05D004381 1.8e-43 179.9 111 85.6
Pp3c2_35530 Physcomitrium patens HOM05D004106 ORTHO05D004381 1.8e-43 179.9 141 70.2
Pp3c1_1160 Physcomitrium patens HOM05D004106 ORTHO05D004381 5.9e-42 174.9 142 68.3
SMO364G0386 Selaginella moellendorffii HOM05D004106 ORTHO05D004381 1.3e-41 173.7 109 80.7
Sc09g0010670 Simmondsia chinensis HOM05D004106 ORTHO05D004381 8.6e-41 171.0 119 79.0
Zm00001eb234060 Zea mays HOM05D004106 ORTHO05D004381 9.5e-40 167.5 168 61.3
Pp3c11_2360 Physcomitrium patens HOM05D004106 ORTHO05D004381 3.6e-39 165.6 142 61.3
Hma1.2p1_2680F.1_g326820 Hydrangea macrophylla HOM05D004106 ORTHO05D004381 1.0e-38 164.1 157 63.1
Rhsim07G0165600 Rhododendron simsii HOM05D004106 ORTHO05D004381 1.2e-37 160.6 349 36.7
CBR_g728 Chara braunii HOM05D004106 ORTHO05D004381 5.7e-37 158.3 113 72.6
CBR_g54183 Chara braunii HOM05D004106 ORTHO05D004381 7.5e-37 157.9 111 72.1
AagrBONN_evm.TU.Sc2ySwM_228.5744 Anthoceros agrestis HOM05D004106 ORTHO05D004381 3.7e-36 155.6 165 54.5
Gohir.D07G031300 Gossypium hirsutum HOM05D004106 ORTHO05D004381 3.2e-35 152.5 128 71.9
Actinidia38669 Actinidia chinensis HOM05D004106 ORTHO05D004381 5.9e-34 148.3 160 60.0
QL02p018811 Quercus lobata HOM05D004106 ORTHO05D004381 1.2e-29 134.0 92 78.3
PRCOL_00004350 Prasinoderma coloniale HOM05D004106 ORTHO05D004381 4.9e-28 128.6 109 61.5
BraA02t07117Z Brassica rapa HOM05D004106 ORTHO05D004381 5.6e-24 115.2 91 71.4
Cre10.g458550 Chlamydomonas reinhardtii HOM05D004106 ORTHO05D004381 5.6e-24 115.2 159 45.3
BcaB05g25007 Brassica carinata HOM05D004106 ORTHO05D004381 1.2e-23 114.0 91 70.3
A02p20860 Brassica napus HOM05D004106 ORTHO05D004381 2.1e-23 113.2 85 72.9
C02p32810 Brassica napus HOM05D004106 ORTHO05D004381 8.1e-23 111.3 86 74.4
BcaC03g15698 Brassica carinata HOM05D004106 ORTHO05D004381 5.2e-22 108.6 86 73.3
BolC2t09418H Brassica oleracea HOM05D004106 ORTHO05D004381 5.2e-22 108.6 86 73.3
Peaxi162Scf00387g00211 Petunia axillaris HOM05D004106 ORTHO05D004381 6.6e-17 91.7 85 56.5
BcaB01g01386 Brassica carinata HOM05D004106 ORTHO05D005755 1.5e-13 80.5 49 85.7
SEGI_18679 Sequoiadendron giganteum HOM05D004106 ORTHO05D004381 3.4e-13 79.3 44 90.9
CARHR238490 Cardamine hirsuta HOM05D004106 ORTHO05D004381 4.4e-13 79.0 47 85.1
Lsat_1_v5_gn_7_47460 Lactuca sativa HOM05D004106 ORTHO05D002137 2.7e-10 69.7 39 87.2
AagrBONN_evm.TU.Sc2ySwM_344.958 Anthoceros agrestis HOM05D010958 ORTHO05D004381 8.1e-07 58.2 83 45.8
AagrBONN_evm.TU.Sc2ySwM_114.14 Anthoceros agrestis HOM05D010958 ORTHO05D004381 8.9e-06 54.7 94 43.6
AagrBONN_evm.TU.Sc2ySwM_114.15 Anthoceros agrestis HOM05D010958 ORTHO05D004381 8.9e-06 54.7 94 43.6
AagrBONN_evm.TU.Sc2ySwM_362.2265 Anthoceros agrestis HOM05D010958 ORTHO05D004381 8.9e-06 54.7 85 42.4
AagrBONN_evm.TU.Sc2ySwM_368.15 Anthoceros agrestis HOM05D010958 ORTHO05D004381 8.9e-06 54.7 94 43.6
AagrBONN_evm.TU.Sc2ySwM_83.9 Anthoceros agrestis HOM05D010958 ORTHO05D004381 8.9e-06 54.7 94 43.6


User provided reference genes

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