Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc46.16 Carica papaya HOM05D006257 ORTHO05D007708 1.4e-107 393.3 239 100.0
Manes.06G057000 Manihot esculenta HOM05D006257 ORTHO05D007708 9.2e-72 274.2 241 69.3
CiPaw.03G245900 Carya illinoinensis HOM05D006257 ORTHO05D007708 1.1e-69 267.3 239 64.4
Potri.018G129600 Populus trichocarpa HOM05D006257 ORTHO05D007708 6.2e-68 261.5 244 64.3
Gohir.A07G036500 Gossypium hirsutum HOM05D006257 ORTHO05D007708 1.4e-67 260.4 239 64.4
GSVIVG01015564001 Vitis vinifera HOM05D006257 ORTHO05D007708 1.8e-67 260.0 239 67.4
Gohir.D07G040500 Gossypium hirsutum HOM05D006257 ORTHO05D007708 4.0e-67 258.8 239 69.5
QL02p088998 Quercus lobata HOM05D006257 ORTHO05D007708 4.0e-67 258.8 238 62.6
Gorai.001G043000 Gossypium raimondii HOM05D006257 ORTHO05D007708 8.9e-67 257.7 239 67.4
Thecc.09G128900 Theobroma cacao HOM05D006257 ORTHO05D007708 8.9e-67 257.7 239 68.6
Hma1.2p1_0931F.1_g238140 Hydrangea macrophylla HOM05D006257 ORTHO05D007708 2.0e-66 256.5 197 73.6
CiPaw.04G172800 Carya illinoinensis HOM05D006257 ORTHO05D007708 2.6e-66 256.1 239 62.8
Duzib187G1365 Durio zibethinus HOM05D006257 ORTHO05D007708 2.6e-66 256.1 239 65.7
Duzib168G0222 Durio zibethinus HOM05D006257 ORTHO05D007708 4.4e-66 255.4 239 68.6
Prupe.7G245400 Prunus persica HOM05D006257 ORTHO05D007708 7.5e-66 254.6 240 61.2
Potri.006G067600 Populus trichocarpa HOM05D006257 ORTHO05D007708 1.7e-65 253.4 193 74.1
CsaV3_2G002980 Cucumis sativus L. HOM05D006257 ORTHO05D007708 4.9e-65 251.9 191 72.3
Atru.chr7.1126 Acer truncatum HOM05D006257 ORTHO05D007708 6.4e-65 251.5 243 63.0
MD02G1029500 Malus domestica HOM05D006257 ORTHO05D007708 8.3e-65 251.1 240 60.8
Actinidia21972 Actinidia chinensis HOM05D006257 ORTHO05D007708 1.9e-64 250.0 240 61.7
MD15G1170900 Malus domestica HOM05D006257 ORTHO05D007708 4.1e-64 248.8 240 66.2
MELO3C004491.2 Cucumis melo HOM05D006257 ORTHO05D007708 7.0e-64 248.1 239 64.0
Ciclev10009322m.g Citrus clementina HOM05D006257 ORTHO05D007708 9.2e-64 247.7 247 66.4
PGR102G0698 Punica granatum HOM05D006257 ORTHO05D007708 9.2e-64 247.7 241 59.8
ClCG11G003160 Citrullus lanatus HOM05D006257 ORTHO05D007708 2.0e-63 246.5 191 70.2
COL.COLO4_35097 Corchorus olitorius HOM05D006257 ORTHO05D007708 3.5e-63 245.7 239 66.1
Actinidia40485 Actinidia chinensis HOM05D006257 ORTHO05D007708 4.6e-63 245.4 242 60.3
CSS0030940 Camellia sinensis var. sinensis HOM05D006257 ORTHO05D007708 4.6e-63 245.4 241 65.1
Sabra06G0050300 Salix brachista HOM05D006257 ORTHO05D007708 6.0e-63 245.0 221 65.6
Glyma.06G224200 Glycine max HOM05D006257 ORTHO05D007708 7.8e-63 244.6 198 69.2
Eucgr.C04235 Eucalyptus grandis HOM05D006257 ORTHO05D007708 1.7e-62 243.4 200 68.5
Glyma.04G142800 Glycine max HOM05D006257 ORTHO05D007708 1.7e-62 243.4 196 69.4
Lalb_Chr13g0301741 Lupinus albus HOM05D006257 ORTHO05D007708 1.7e-62 243.4 240 61.7
TAR636G3495 Trochodendron aralioides HOM05D006257 ORTHO05D007708 1.7e-62 243.4 239 64.0
Lalb_Chr07g0179081 Lupinus albus HOM05D006257 ORTHO05D007708 2.3e-62 243.0 239 60.3
Sed0025440 Sechium edule HOM05D006257 ORTHO05D007708 3.9e-62 242.3 239 59.4
VMungo1215G0813 Vigna mungo HOM05D006257 ORTHO05D007708 3.3e-61 239.2 201 65.2
THA.LOC104808977 Tarenaya hassleriana HOM05D006257 ORTHO05D007708 4.3e-61 238.8 178 73.6
Haze_25555 Corylus avellana HOM05D006257 ORTHO05D007708 1.6e-60 236.9 238 59.7
Lj4g0014254 Lotus japonicus HOM05D006257 ORTHO05D007708 1.6e-60 236.9 239 61.1
Phvul.003G166300 Phaseolus vulgaris HOM05D006257 ORTHO05D007708 1.6e-60 236.9 192 67.2
vmacro20574 Vaccinium macrocarpon HOM05D006257 ORTHO05D007708 2.8e-60 236.1 241 61.0
Ca_06925_v3 Cicer arietinum L. HOM05D006257 ORTHO05D007708 3.6e-60 235.7 239 59.0
Sabra18G0110100 Salix brachista HOM05D006257 ORTHO05D007708 6.2e-60 235.0 219 63.9
arahy.Tifrunner.gnm1.ann1.BX3F9W Arachis hypogaea HOM05D006257 ORTHO05D007708 1.1e-59 234.2 243 58.0
TPR.G26482 Trifolium pratense HOM05D006257 ORTHO05D007708 3.1e-59 232.6 239 57.7
TWI34G0058 Tripterygium wilfordii HOM05D006257 ORTHO05D007708 3.1e-59 232.6 242 64.9
Nitab4.5_0001349g0030 Nicotiana tabacum HOM05D006257 ORTHO05D007708 1.2e-58 230.7 201 64.7
Cc06_g08290 Coffea canephora HOM05D006257 ORTHO05D007708 1.5e-58 230.3 180 72.2
arahy.Tifrunner.gnm1.ann1.FTT948 Arachis hypogaea HOM05D006257 ORTHO05D007708 2.6e-58 229.6 243 57.6
Lalb_Chr08g0234691 Lupinus albus HOM05D006257 ORTHO05D007708 3.4e-58 229.2 242 61.2
CARHR250830 Cardamine hirsuta HOM05D006257 ORTHO05D007708 4.4e-58 228.8 172 73.3
Nitab4.5_0006319g0030 Nicotiana tabacum HOM05D006257 ORTHO05D007708 4.4e-58 228.8 198 64.1
Medtr0339s0030 Medicago truncatula HOM05D006257 ORTHO05D007708 5.8e-58 228.4 239 57.7
CAN.G551.82 Capsicum annuum HOM05D006257 ORTHO05D007708 9.9e-58 227.6 172 69.8
TWI63G0502 Tripterygium wilfordii HOM05D006257 ORTHO05D007708 9.9e-58 227.6 242 61.6
Lj7A424T23 Lonicera japonica HOM05D006257 ORTHO05D007708 1.3e-57 227.3 239 57.7
Peaxi162Scf00313g00815 Petunia axillaris HOM05D006257 ORTHO05D007708 1.3e-57 227.3 201 64.7
RcHm_v2.0_Chr2g0088141 Rosa chinensis HOM05D006257 ORTHO05D007708 1.3e-57 227.3 202 64.4
Solyc12g009600.2 Solanum lycopersicum HOM05D006257 ORTHO05D007708 2.9e-57 226.1 192 63.0
Sopen12g004590 Solanum pennellii HOM05D006257 ORTHO05D007708 2.9e-57 226.1 192 63.0
Aqoxy7G02265 Aquilegia oxysepala HOM05D006257 ORTHO05D007708 3.7e-57 225.7 204 62.7
AL6G50510 Arabidopsis lyrata HOM05D006257 ORTHO05D007708 2.4e-56 223.0 178 69.1
HanXRQChr10g0315681 Helianthus annuus HOM05D006257 ORTHO05D007708 3.2e-56 222.6 200 64.0
Oeu052179.2 Olea europaea HOM05D006257 ORTHO05D007708 4.1e-56 222.2 189 69.3
A09p01980 Brassica napus HOM05D006257 ORTHO05D007708 9.2e-56 221.1 199 64.8
Thhalv10028953m.g Eutrema salsugineum HOM05D006257 ORTHO05D007708 9.2e-56 221.1 178 69.1
BcaC04g23996 Brassica carinata HOM05D006257 ORTHO05D007708 1.2e-55 220.7 185 67.6
AT4G02530 Arabidopsis thaliana HOM05D006257 ORTHO05D007708 2.7e-55 219.5 173 69.9
C09p02090 Brassica napus HOM05D006257 ORTHO05D007708 3.5e-55 219.2 174 69.5
Sp6g02450 Schrenkiella parvula HOM05D006257 ORTHO05D007708 4.6e-55 218.8 173 70.5
BraA09t35849Z Brassica rapa HOM05D006257 ORTHO05D007708 6.0e-55 218.4 174 69.5
EL10Ac8g18684 Beta vulgaris HOM05D006257 ORTHO05D007708 1.0e-54 217.6 190 64.7
BolC9t53138H Brassica oleracea HOM05D006257 ORTHO05D007708 1.0e-54 217.6 174 69.0
AUR62011151 Chenopodium quinoa HOM05D006257 ORTHO05D007708 1.0e-54 217.6 243 56.0
MSTRG.26415 Avicennia marina HOM05D006257 ORTHO05D007708 1.3e-54 217.2 181 70.2
MBI04_g29340_MAGBIO Magnolia biondii HOM05D006257 ORTHO05D007708 3.9e-54 215.7 206 61.7
Hund09262 Selenicereus undatus HOM05D006257 ORTHO05D007708 5.1e-54 215.3 178 67.4
TAR625G1128 Trochodendron aralioides HOM05D006257 ORTHO05D007708 6.6e-54 214.9 147 79.6
Carub.0006s3460 Capsella rubella HOM05D006257 ORTHO05D007708 1.1e-53 214.2 173 68.2
ECA234G3820 Erigeron canadensis HOM05D006257 ORTHO05D007708 4.3e-53 212.2 172 67.4
FAN26G0886 Fragaria x ananassa HOM05D006257 ORTHO05D007708 9.5e-53 211.1 207 59.9
Glyma.17G113300 Glycine max HOM05D006257 ORTHO05D007708 1.2e-52 210.7 194 63.9
FvH4_1g03010 Fragaria vesca HOM05D006257 ORTHO05D007708 2.1e-52 209.9 207 59.4
Ah.09g225230 Amaranthus hybridus HOM05D006257 ORTHO05D007708 2.8e-52 209.5 172 66.3
FAN23G1258 Fragaria x ananassa HOM05D006257 ORTHO05D007708 2.8e-52 209.5 207 58.9
FAN28G1785 Fragaria x ananassa HOM05D006257 ORTHO05D007708 4.7e-52 208.8 203 60.1
PSO210G1348 Papaver somniferum HOM05D006257 ORTHO05D007708 4.7e-52 208.8 197 61.9
CANSAT11G2152 Cannabis sativa HOM05D006257 ORTHO05D007708 8.1e-52 208.0 134 80.6
PSO210G1954 Papaver somniferum HOM05D006257 ORTHO05D007708 1.4e-51 207.2 176 66.5
Aa31LG5G2160 Aethionema arabicum HOM05D006257 ORTHO05D007708 4.0e-51 205.7 179 65.4
AUR62013336 Chenopodium quinoa HOM05D006257 ORTHO05D007708 1.2e-50 204.1 204 59.3
FAN19G0162 Fragaria x ananassa HOM05D006257 ORTHO05D007708 1.2e-50 204.1 175 65.7
Nn8g39488 Nelumbo nucifera HOM05D006257 ORTHO05D007708 3.4e-50 202.6 163 68.7
Oeu038255.2 Olea europaea HOM05D006257 ORTHO05D007708 3.4e-50 202.6 246 53.3
DCAR_020916 Daucus carota HOM05D006257 ORTHO05D007708 9.9e-50 201.1 209 56.9
SGA_v2.0_scaffold63G21838 Striga asiatica HOM05D006257 ORTHO05D007708 1.7e-49 200.3 149 74.5
CDE07G0641 Ceratophyllum demersum HOM05D006257 ORTHO05D007708 2.9e-49 199.5 192 62.0
ATR0598G180 Amborella trichopoda HOM05D006257 ORTHO05D007708 1.1e-48 197.6 147 72.8
unitig_37.g12643 Utricularia gibba HOM05D006257 ORTHO05D007708 2.4e-48 196.4 185 60.0
Lsat_1_v5_gn_5_95081 Lactuca sativa HOM05D006257 ORTHO05D007708 1.2e-47 194.1 181 60.2
HPP92_024114 Vanilla planifolia HOM05D006257 ORTHO05D007708 2.1e-47 193.4 171 64.3
Migut.K00442 Erythranthe guttata HOM05D006257 ORTHO05D007708 6.0e-47 191.8 203 58.6
HPP92_024119 Vanilla planifolia HOM05D006257 ORTHO05D007708 3.9e-46 189.1 145 69.7
Manes.14G133800 Manihot esculenta HOM05D006257 ORTHO05D007708 1.1e-43 181.0 181 66.3
Dinv36505 Davidia involucrata HOM05D006257 ORTHO05D007708 2.4e-43 179.9 138 72.5
Os06g0705100 Oryza sativa ssp. japonica HOM05D006257 ORTHO05D007708 3.1e-43 179.5 147 65.3
Sc14g0000190 Simmondsia chinensis HOM05D006257 ORTHO05D007708 1.2e-42 177.6 175 59.4
Zm00001eb227340 Zea mays HOM05D006257 ORTHO05D007708 9.9e-42 174.5 145 64.1
BcaC03g16142 Brassica carinata HOM05D006257 ORTHO05D007708 4.8e-36 155.6 140 65.7
Sed0003979 Sechium edule HOM05D006257 ORTHO05D007708 2.4e-35 153.3 202 53.0
Aqoxy7G03671 Aquilegia oxysepala HOM05D006257 ORTHO05D007708 6.9e-35 151.8 160 56.2
A02p24830 Brassica napus HOM05D006257 ORTHO05D007708 1.7e-33 147.1 128 63.3
SMO111G0154 Selaginella moellendorffii HOM05D006257 ORTHO05D007708 2.4e-32 143.3 166 49.4
BraA02t07471Z Brassica rapa HOM05D007780 ORTHO05D000140 9.3e-32 141.4 128 60.2
Psat4g037320 Pisum sativum HOM05D006257 ORTHO05D007708 2.3e-30 136.7 120 61.7
Mapoly0099s0035 Marchantia polymorpha HOM05D006257 ORTHO05D007708 5.1e-30 135.6 144 51.4
AagrBONN_evm.TU.Sc2ySwM_344.2604 Anthoceros agrestis HOM05D006257 ORTHO05D007708 1.4e-27 127.5 161 47.2
Pp3c8_15020 Physcomitrium patens HOM05D006257 ORTHO05D007708 1.5e-26 124.0 145 50.3
SEGI_32211 Sequoiadendron giganteum HOM05D006257 ORTHO05D007708 6.7e-22 108.6 104 53.8
C02p39320 Brassica napus HOM05D006257 ORTHO05D007708 2.1e-20 103.6 75 72.0
Mapoly0522s0001 Marchantia polymorpha HOM05D006257 ORTHO05D007708 1.7e-17 94.0 106 49.1
Pp3c24_6770 Physcomitrium patens HOM05D006257 ORTHO05D007708 7.1e-16 88.6 111 47.7
FAN19G1291 Fragaria x ananassa HOM05D006257 ORTHO05D007708 4.1e-11 72.8 94 46.8
BcaB05g23639 Brassica carinata HOM05D006257 ORTHO05D007708 2.0e-10 70.5 66 62.1
PRCOL_00001366 Prasinoderma coloniale HOM05D006257 ORTHO05D007708 3.6e-07 59.7 159 34.6
Cre06.g256250 Chlamydomonas reinhardtii HOM05D006257 ORTHO05D007708 3.9e-06 56.2 156 29.5


User provided reference genes

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