Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc46.157 Carica papaya HOM05D005968 ORTHO05D007158 8.2e-99 363.6 170 100.0
Atru.chr7.47_Atru.chr7.48 Acer truncatum HOM05D005968 ORTHO05D007158 1.0e-93 346.7 170 92.4
Thecc.09G030600 Theobroma cacao HOM05D005968 ORTHO05D007158 5.1e-93 344.4 170 90.0
Duzib187G1838 Durio zibethinus HOM05D005968 ORTHO05D007158 3.7e-91 338.2 170 87.6
GSVIVG01023606001 Vitis vinifera HOM05D005968 ORTHO05D007158 4.8e-91 337.8 170 90.6
arahy.Tifrunner.gnm1.ann1.D6JQQQ Arachis hypogaea HOM05D005968 ORTHO05D007158 1.8e-90 335.9 170 90.6
Gohir.A08G251800 Gossypium hirsutum HOM05D005968 ORTHO05D007158 4.1e-90 334.7 170 87.6
TWI34G0179 Tripterygium wilfordii HOM05D005968 ORTHO05D007158 5.3e-90 334.3 169 90.5
Glyma.17G073700 Glycine max HOM05D005968 ORTHO05D007158 6.9e-90 334.0 170 90.0
CANSAT11G2689 Cannabis sativa HOM05D005968 ORTHO05D007158 9.1e-90 333.6 170 90.0
Dinv41378 Davidia involucrata HOM05D005968 ORTHO05D007158 9.1e-90 333.6 163 91.4
Potri.006G184300 Populus trichocarpa HOM05D005968 ORTHO05D007158 9.1e-90 333.6 169 90.5
CiPaw.15G168400 Carya illinoinensis HOM05D005968 ORTHO05D007158 2.0e-89 332.4 170 89.4
Gohir.D08G273400 Gossypium hirsutum HOM05D005968 ORTHO05D007158 2.0e-89 332.4 163 89.6
Gorai.004G291800 Gossypium raimondii HOM05D005968 ORTHO05D007158 2.0e-89 332.4 163 89.6
Cfa020826 Carpinus fangiana HOM05D002374 ORTHO05D003594 3.4e-89 331.6 170 88.8
MD15G1144700 Malus domestica HOM05D005968 ORTHO05D007158 3.4e-89 331.6 163 90.2
Ca_21128_v3 Cicer arietinum L. HOM05D005968 ORTHO05D007158 4.5e-89 331.3 170 90.0
MD02G1007400 Malus domestica HOM05D005968 ORTHO05D007158 4.5e-89 331.3 167 89.8
Actinidia38673 Actinidia chinensis HOM05D005968 ORTHO05D007158 5.9e-89 330.9 163 90.8
Manes.14G143600 Manihot esculenta HOM05D005968 ORTHO05D007158 7.7e-89 330.5 171 89.5
Glyma.02G204100 Glycine max HOM05D005968 ORTHO05D007158 1.0e-88 330.1 170 88.8
Prupe.7G263000 Prunus persica HOM05D005968 ORTHO05D007158 1.3e-88 329.7 166 87.3
Lalb_Chr12g0198711 Lupinus albus HOM05D005968 ORTHO05D007158 1.7e-88 329.3 170 88.2
CSS0021374 Camellia sinensis var. sinensis HOM05D005968 ORTHO05D007158 2.2e-88 328.9 163 89.6
TAR626G1902 Trochodendron aralioides HOM05D005968 ORTHO05D007158 2.2e-88 328.9 170 89.4
Ciclev10008980m.g Citrus clementina HOM05D005968 ORTHO05D007158 3.8e-88 328.2 170 86.5
Dinv42854 Davidia involucrata HOM05D005968 ORTHO05D007158 5.0e-88 327.8 168 87.5
Lj4g0027447 Lotus japonicus HOM05D005968 ORTHO05D007158 5.0e-88 327.8 170 87.6
SalBow1G6433 Salvia bowleyana HOM05D005968 ORTHO05D007158 5.0e-88 327.8 166 88.0
TPR.G24830 Trifolium pratense HOM05D005968 ORTHO05D007158 6.5e-88 327.4 170 88.2
Nn8g39893 Nelumbo nucifera HOM05D005968 ORTHO05D007158 8.5e-88 327.0 162 89.5
SGA_v2.0_scaffold347G49545 Striga asiatica HOM05D005968 ORTHO05D007158 1.1e-87 326.6 163 89.0
HanXRQChr09g0245781 Helianthus annuus HOM05D005968 ORTHO05D007158 1.4e-87 326.2 163 89.6
Lsat_1_v5_gn_8_63401 Lactuca sativa HOM05D005968 ORTHO05D007158 1.4e-87 326.2 162 89.5
Oeu038140.1 Olea europaea HOM05D005968 ORTHO05D007158 1.4e-87 326.2 163 87.7
VMungo1215G2113 Vigna mungo HOM05D005968 ORTHO05D007158 1.9e-87 325.9 162 90.1
Aqoxy2G01962_Aqoxy2G01963 Aquilegia oxysepala HOM05D005968 ORTHO05D007158 2.5e-87 325.5 161 91.9
ECA236G4418 Erigeron canadensis HOM05D005968 ORTHO05D007158 2.5e-87 325.5 162 88.9
CiPaw.16G111000 Carya illinoinensis HOM05D005968 ORTHO05D007158 5.5e-87 324.3 170 87.6
Hma1.2p1_0222F.1_g093590 Hydrangea macrophylla HOM05D005968 ORTHO05D007158 5.5e-87 324.3 162 88.9
Lj7A459G65 Lonicera japonica HOM05D005968 ORTHO05D007158 5.5e-87 324.3 163 89.6
EL10Ac8g18668 Beta vulgaris HOM05D005968 ORTHO05D007158 7.2e-87 323.9 166 88.6
Cc06_g14950 Coffea canephora HOM05D005968 ORTHO05D007158 9.4e-87 323.6 170 88.2
QL02p093270 Quercus lobata HOM05D005968 ORTHO05D007158 9.4e-87 323.6 163 87.7
COL.COLO4_18810 Corchorus olitorius HOM05D000238 ORTHO05D007158 1.2e-86 323.2 157 91.1
FAN26G1763 Fragaria x ananassa HOM05D005968 ORTHO05D007158 1.2e-86 323.2 166 85.5
Sabra18G0090900 Salix brachista HOM05D005968 ORTHO05D007158 1.2e-86 323.2 169 85.8
MSTRG.26272 Avicennia marina HOM05D005968 ORTHO05D007158 1.6e-86 322.8 164 87.2
RcHm_v2.0_Chr2g0085611 Rosa chinensis HOM05D005968 ORTHO05D007158 2.1e-86 322.4 170 84.7
FAN23G3092 Fragaria x ananassa HOM05D005968 ORTHO05D007158 2.7e-86 322.0 166 84.9
Migut.K00326 Erythranthe guttata HOM05D005968 ORTHO05D007158 3.6e-86 321.6 162 88.3
Medtr4g130830 Medicago truncatula HOM05D005968 ORTHO05D007158 3.6e-86 321.6 170 87.6
Phvul.003G156000 Phaseolus vulgaris HOM05D005968 ORTHO05D007158 3.6e-86 321.6 170 86.5
FvH4_1g00920 Fragaria vesca HOM05D005968 ORTHO05D007158 4.7e-86 321.2 166 84.9
FAN28G0447 Fragaria x ananassa HOM05D005968 ORTHO05D007158 4.7e-86 321.2 166 84.9
AUR62006466 Chenopodium quinoa HOM05D005968 ORTHO05D007158 6.1e-86 320.9 166 86.1
CAN.G160.61 Capsicum annuum HOM05D005968 ORTHO05D007158 7.9e-86 320.5 160 90.0
AUR62029822 Chenopodium quinoa HOM05D005968 ORTHO05D007158 1.0e-85 320.1 166 86.1
Sabra06G0140100 Salix brachista HOM05D005968 ORTHO05D007158 1.4e-85 319.7 191 78.5
Eucgr.C02493 Eucalyptus grandis HOM05D005968 ORTHO05D007158 2.3e-85 318.9 170 84.7
Eucgr.C02540 Eucalyptus grandis HOM05D005968 ORTHO05D007158 2.3e-85 318.9 170 84.7
Nn2g12378 Nelumbo nucifera HOM05D005968 ORTHO05D007158 2.3e-85 318.9 163 88.3
Potri.018G106700 Populus trichocarpa HOM05D005968 ORTHO05D007158 2.3e-85 318.9 169 85.8
BcaNung03430 Brassica carinata HOM05D005968 ORTHO05D007158 3.0e-85 318.5 172 82.6
A01p07280 Brassica napus HOM05D005968 ORTHO05D007158 3.0e-85 318.5 172 83.1
BraA01t00677Z Brassica rapa HOM05D005968 ORTHO05D007158 3.0e-85 318.5 172 83.1
CsaV3_1G028970 Cucumis sativus L. HOM05D005968 ORTHO05D007158 3.0e-85 318.5 163 89.0
PSO111G0029 Papaver somniferum HOM05D005968 ORTHO05D007158 3.9e-85 318.2 170 85.9
PSO561G0082 Papaver somniferum HOM05D005968 ORTHO05D007158 3.9e-85 318.2 170 85.9
Sc17g0006690 Simmondsia chinensis HOM05D005968 ORTHO05D007158 3.9e-85 318.2 161 88.8
BcaC09g51877 Brassica carinata HOM05D005968 ORTHO05D007158 6.7e-85 317.4 172 82.6
C01p08040 Brassica napus HOM05D005968 ORTHO05D007158 6.7e-85 317.4 172 82.6
BolC1t00793H Brassica oleracea HOM05D005968 ORTHO05D007158 6.7e-85 317.4 172 82.6
Nitab4.5_0009876g0020 Nicotiana tabacum HOM05D005968 ORTHO05D007158 6.7e-85 317.4 160 88.8
Sp7g28770 Schrenkiella parvula HOM05D005968 ORTHO05D007158 6.7e-85 317.4 164 84.8
THA.LOC104803560 Tarenaya hassleriana HOM05D005968 ORTHO05D007158 6.7e-85 317.4 162 87.7
Peaxi162Scf00401g00718 Petunia axillaris HOM05D005968 ORTHO05D007158 8.8e-85 317.0 160 89.4
PGSC0003DMG400011184 Solanum tuberosum HOM05D005968 ORTHO05D007158 1.1e-84 316.6 162 87.7
Carub.0007s0964 Capsella rubella HOM05D005968 ORTHO05D007158 2.0e-84 315.8 174 82.2
Sopen07g001720 Solanum pennellii HOM05D005968 ORTHO05D007158 2.0e-84 315.8 160 88.8
Sed0018428 Sechium edule HOM05D005968 ORTHO05D007158 2.6e-84 315.5 167 86.8
AT4G30900 Arabidopsis thaliana HOM05D005968 ORTHO05D007158 3.3e-84 315.1 161 85.7
ATR0739G020 Amborella trichopoda HOM05D005968 ORTHO05D007158 4.4e-84 314.7 160 87.5
AL7G21190 Arabidopsis lyrata HOM05D005968 ORTHO05D007158 4.4e-84 314.7 161 85.1
DCAR_019393 Daucus carota HOM05D005968 ORTHO05D007158 5.7e-84 314.3 163 85.9
Psat0s2403g0360 Pisum sativum HOM05D005968 ORTHO05D007158 7.4e-84 313.9 156 90.4
Thhalv10025727m.g Eutrema salsugineum HOM05D005968 ORTHO05D007158 1.3e-83 313.2 172 82.0
Zm00001eb086780 Zea mays HOM05D005968 ORTHO05D007158 1.3e-83 313.2 163 83.4
unitig_52.g17565 Utricularia gibba HOM05D005968 ORTHO05D007158 1.7e-83 312.8 163 84.7
CARHR238800 Cardamine hirsuta HOM05D005968 ORTHO05D007158 6.3e-83 310.8 164 83.5
Zm00001eb420110 Zea mays HOM05D005968 ORTHO05D007158 4.1e-82 308.1 163 82.2
Nitab4.5_0003623g0020 Nicotiana tabacum HOM05D005968 ORTHO05D007158 3.5e-81 305.1 156 87.8
DCAR_017911 Daucus carota HOM05D005968 ORTHO05D007158 5.9e-81 304.3 163 84.0
Lsat_1_v5_gn_4_18721 Lactuca sativa HOM05D005968 ORTHO05D007158 1.3e-80 303.1 162 82.7
SEGI_19747 Sequoiadendron giganteum HOM05D005968 ORTHO05D007158 3.8e-80 301.6 160 84.4
vmacro06082 Vaccinium macrocarpon HOM05D005968 ORTHO05D007158 4.7e-78 294.7 180 76.1
Haze_19205 Corylus avellana HOM05D005968 ORTHO05D007158 1.9e-71 272.7 146 85.6
Lsat_1_v5_gn_7_66900 Lactuca sativa HOM05D005968 ORTHO05D007158 5.9e-65 251.1 162 71.6
PGR102G1528 Punica granatum HOM05D005968 ORTHO05D007158 1.8e-61 239.6 120 87.5
Mapoly0088s0077 Marchantia polymorpha HOM05D005968 ORTHO05D007158 8.3e-59 230.7 160 64.4
RhsimUnG0158300 Rhododendron simsii HOM05D005968 ORTHO05D001263 1.3e-56 223.4 122 79.5
TAR636G1721 Trochodendron aralioides HOM05D005968 ORTHO05D007158 6.1e-54 214.5 111 88.3
HPP92_004697 Vanilla planifolia HOM05D005968 ORTHO05D007158 3.5e-49 198.7 101 86.1
AagrBONN_evm.TU.Sc2ySwM_362.192 Anthoceros agrestis HOM05D005968 ORTHO05D007158 2.6e-36 156.0 119 56.3
arahy.Tifrunner.gnm1.ann1.HW7BNQ Arachis hypogaea HOM05D005968 ORTHO05D007158 2.7e-33 146.0 69 95.7
Nitab4.5_0006121g0010 Nicotiana tabacum HOM05D005968 ORTHO05D007158 3.8e-27 125.6 66 86.4
arahy.Tifrunner.gnm1.ann1.4WLG0J Arachis hypogaea HOM05D005968 ORTHO05D007158 5.6e-23 111.7 62 75.8
CiPaw.15G168700 Carya illinoinensis HOM05D005968 ORTHO05D007158 1.3e-19 100.5 50 92.0
SHI23672 Sapria himalayana HOM05D005968 ORTHO05D007158 1.1e-18 97.4 66 68.2


User provided reference genes

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