Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc46.156 Carica papaya HOM05D005968 ORTHO05D007158 1.4e-81 306.2 153 100.0
GSVIVG01023605001 Vitis vinifera HOM05D005968 ORTHO05D007158 1.9e-54 216.1 146 74.0
Duzib187G1838 Durio zibethinus HOM05D005968 ORTHO05D007158 9.4e-54 213.8 143 74.8
Thecc.09G030600 Theobroma cacao HOM05D005968 ORTHO05D007158 1.2e-53 213.4 144 74.3
CiPaw.15G168400 Carya illinoinensis HOM05D005968 ORTHO05D007158 4.7e-53 211.5 144 73.6
Psat0s2403g0360 Pisum sativum HOM05D005968 ORTHO05D007158 8.0e-53 210.7 147 69.4
Lalb_Chr12g0198701 Lupinus albus HOM05D005968 ORTHO05D007158 1.4e-52 209.9 145 71.7
Gohir.D08G273400 Gossypium hirsutum HOM05D005968 ORTHO05D007158 2.3e-52 209.1 144 73.6
Nn8g39893 Nelumbo nucifera HOM05D005968 ORTHO05D007158 2.3e-52 209.1 143 73.4
PSO561G0082 Papaver somniferum HOM05D005968 ORTHO05D007158 2.3e-52 209.1 143 72.7
TPR.G24874 Trifolium pratense HOM05D005968 ORTHO05D007158 2.3e-52 209.1 145 70.3
Gorai.004G291800 Gossypium raimondii HOM05D005968 ORTHO05D007158 3.0e-52 208.8 143 74.1
Hma1.2p1_0222F.1_g093590 Hydrangea macrophylla HOM05D005968 ORTHO05D007158 3.0e-52 208.8 148 70.9
PSO111G0029 Papaver somniferum HOM05D005968 ORTHO05D007158 4.0e-52 208.4 143 72.7
Manes.14G143600 Manihot esculenta HOM05D005968 ORTHO05D007158 8.8e-52 207.2 144 72.2
Glyma.02G204100 Glycine max HOM05D005968 ORTHO05D007158 1.2e-51 206.8 144 70.1
Gohir.A08G251800 Gossypium hirsutum HOM05D005968 ORTHO05D007158 1.5e-51 206.5 144 72.9
Lj4g0027447 Lotus japonicus HOM05D005968 ORTHO05D007158 1.5e-51 206.5 143 72.0
Medtr4g130840 Medicago truncatula HOM05D005968 ORTHO05D007158 1.5e-51 206.5 147 68.0
Dinv43246 Davidia involucrata HOM05D005968 ORTHO05D007158 3.4e-51 205.3 147 70.7
Glyma.17G073700 Glycine max HOM05D005968 ORTHO05D007158 7.5e-51 204.1 144 70.1
Thhalv10025727m.g Eutrema salsugineum HOM05D005968 ORTHO05D007158 1.7e-50 203.0 143 70.6
Potri.006G184300 Populus trichocarpa HOM05D005968 ORTHO05D007158 1.7e-50 203.0 144 70.1
Dinv41378 Davidia involucrata HOM05D005968 ORTHO05D007158 2.8e-50 202.2 143 70.6
THA.LOC104803560 Tarenaya hassleriana HOM05D005968 ORTHO05D007158 2.8e-50 202.2 143 71.3
TAR626G1902 Trochodendron aralioides HOM05D005968 ORTHO05D007158 3.7e-50 201.8 140 70.7
Cc06_g14960 Coffea canephora HOM05D005968 ORTHO05D007158 4.8e-50 201.4 146 69.2
Nn2g12378 Nelumbo nucifera HOM05D005968 ORTHO05D007158 4.8e-50 201.4 142 71.1
CSS0021374 Camellia sinensis var. sinensis HOM05D005968 ORTHO05D007158 6.3e-50 201.1 142 71.1
Sp7g28770 Schrenkiella parvula HOM05D005968 ORTHO05D007158 6.3e-50 201.1 143 69.2
CiPaw.16G111000 Carya illinoinensis HOM05D005968 ORTHO05D007158 8.3e-50 200.7 138 71.7
Atru.chr7.47_Atru.chr7.48 Acer truncatum HOM05D005968 ORTHO05D007158 1.1e-49 200.3 143 70.6
Prupe.7G263000 Prunus persica HOM05D005968 ORTHO05D007158 1.1e-49 200.3 142 71.1
CARHR238800 Cardamine hirsuta HOM05D005968 ORTHO05D007158 1.8e-49 199.5 142 69.7
MD15G1144700 Malus domestica HOM05D005968 ORTHO05D007158 1.8e-49 199.5 145 69.0
Dinv42854 Davidia involucrata HOM05D005968 ORTHO05D007158 2.4e-49 199.1 142 71.1
HanXRQChr09g0245781 Helianthus annuus HOM05D005968 ORTHO05D007158 2.4e-49 199.1 148 68.2
Potri.018G106700 Populus trichocarpa HOM05D005968 ORTHO05D007158 3.1e-49 198.7 144 68.8
AL7G21190 Arabidopsis lyrata HOM05D005968 ORTHO05D007158 4.1e-49 198.4 143 68.5
MELO3C010224.2 Cucumis melo HOM05D005968 ORTHO05D007158 4.1e-49 198.4 145 68.3
Carub.0007s0964 Capsella rubella HOM05D005968 ORTHO05D007158 5.4e-49 198.0 143 68.5
ClCG06G012410 Citrullus lanatus HOM05D005968 ORTHO05D007158 7.0e-49 197.6 145 69.0
Lj7A459G65 Lonicera japonica HOM05D005968 ORTHO05D007158 7.0e-49 197.6 146 67.8
MD02G1007400 Malus domestica HOM05D005968 ORTHO05D007158 7.0e-49 197.6 145 66.9
Sed0018428 Sechium edule HOM05D005968 ORTHO05D007158 2.0e-48 196.1 143 69.2
Sopen07g001730 Solanum pennellii HOM05D005968 ORTHO05D007158 2.0e-48 196.1 146 67.8
PGR102G1528 Punica granatum HOM05D005968 ORTHO05D007158 3.5e-48 195.3 143 69.2
CANSAT11G2689 Cannabis sativa HOM05D005968 ORTHO05D007158 4.5e-48 194.9 143 66.4
Ciclev10008980m.g Citrus clementina HOM05D005968 ORTHO05D007158 4.5e-48 194.9 143 67.8
Solyc07g005620.2 Solanum lycopersicum HOM05D005968 ORTHO05D007158 4.5e-48 194.9 146 67.1
RcHm_v2.0_Chr2g0085621 Rosa chinensis HOM05D005968 ORTHO05D007158 1.0e-47 193.7 145 66.9
DCAR_019393 Daucus carota HOM05D005968 ORTHO05D007158 3.8e-47 191.8 142 68.3
Oeu038141.1 Olea europaea HOM05D005968 ORTHO05D007158 3.8e-47 191.8 153 65.4
ECA236G4418 Erigeron canadensis HOM05D005968 ORTHO05D007158 5.0e-47 191.4 143 66.4
AT4G30900 Arabidopsis thaliana HOM05D005968 ORTHO05D007158 8.5e-47 190.7 143 66.4
PGSC0003DMG400011184 Solanum tuberosum HOM05D005968 ORTHO05D007158 8.5e-47 190.7 143 67.1
QL02p093270 Quercus lobata HOM05D005968 ORTHO05D007158 1.1e-46 190.3 144 66.0
Eucgr.C02493 Eucalyptus grandis HOM05D005968 ORTHO05D007158 1.9e-46 189.5 143 67.1
arahy.Tifrunner.gnm1.ann1.D6JQQQ Arachis hypogaea HOM05D005968 ORTHO05D007158 5.5e-46 188.0 137 69.3
FAN23G3092 Fragaria x ananassa HOM05D005968 ORTHO05D007158 5.5e-46 188.0 144 66.0
FAN26G1763 Fragaria x ananassa HOM05D005968 ORTHO05D007158 7.2e-46 187.6 145 65.5
BolC1t00793H Brassica oleracea HOM05D005968 ORTHO05D007158 9.4e-46 187.2 137 68.6
FvH4_1g00920 Fragaria vesca HOM05D005968 ORTHO05D007158 1.2e-45 186.8 142 66.9
BcaC09g51877 Brassica carinata HOM05D005968 ORTHO05D007158 2.1e-45 186.0 137 67.9
BcaNung03430 Brassica carinata HOM05D005968 ORTHO05D007158 2.1e-45 186.0 144 65.3
A01p07280 Brassica napus HOM05D005968 ORTHO05D007158 2.1e-45 186.0 137 67.9
BraA01t00677Z Brassica rapa HOM05D005968 ORTHO05D007158 2.1e-45 186.0 137 67.9
Migut.K00326 Erythranthe guttata HOM05D005968 ORTHO05D007158 2.1e-45 186.0 144 65.3
VMungo1215G2113 Vigna mungo HOM05D005968 ORTHO05D007158 4.7e-45 184.9 136 66.2
DCAR_017911 Daucus carota HOM05D005968 ORTHO05D007158 6.1e-45 184.5 147 63.9
EL10Ac8g18668 Beta vulgaris HOM05D005968 ORTHO05D007158 1.0e-44 183.7 143 63.6
C01p08040 Brassica napus HOM05D005968 ORTHO05D007158 1.8e-44 183.0 137 67.2
Aqoxy2G01962_Aqoxy2G01963 Aquilegia oxysepala HOM05D005968 ORTHO05D007158 2.3e-44 182.6 147 63.9
Os05g0279600 Oryza sativa ssp. japonica HOM05D005968 ORTHO05D007158 1.5e-43 179.9 148 61.5
Zm00001eb086780 Zea mays HOM05D005968 ORTHO05D007158 2.0e-43 179.5 144 63.2
Peaxi162Scf00401g00718 Petunia axillaris HOM05D005968 ORTHO05D007158 2.6e-43 179.1 136 66.2
HPP92_004698 Vanilla planifolia HOM05D005968 ORTHO05D007158 3.4e-43 178.7 147 63.9
Zm00001eb420110 Zea mays HOM05D005968 ORTHO05D007158 3.4e-43 178.7 143 63.6
Aa31LG2G19470 Aethionema arabicum HOM05D005968 ORTHO05D007158 7.5e-43 177.6 137 65.0
Lsat_1_v5_gn_8_63401 Lactuca sativa HOM05D005968 ORTHO05D007158 7.5e-43 177.6 137 65.7
Sabra06G0140100 Salix brachista HOM05D005968 ORTHO05D007158 1.3e-42 176.8 202 50.5
Cfa020826 Carpinus fangiana HOM05D002374 ORTHO05D003594 1.7e-42 176.4 129 67.4
SalBow1G6433 Salvia bowleyana HOM05D005968 ORTHO05D007158 2.8e-42 175.6 152 60.5
CiPaw.15G168700 Carya illinoinensis HOM05D005968 ORTHO05D007158 1.1e-41 173.7 137 66.4
Sabra18G0090900 Salix brachista HOM05D005968 ORTHO05D007158 3.1e-41 172.2 170 55.9
Ca_21128_v3 Cicer arietinum L. HOM05D005968 ORTHO05D007158 7.0e-41 171.0 137 64.2
SEGI_19747 Sequoiadendron giganteum HOM05D005968 ORTHO05D007158 7.5e-35 151.0 146 53.4
Mapoly0088s0077 Marchantia polymorpha HOM05D005968 ORTHO05D007158 1.3e-34 150.2 141 53.9
Phvul.003G156000 Phaseolus vulgaris HOM05D005968 ORTHO05D007158 1.1e-33 147.1 75 88.0
COL.COLO4_18810 Corchorus olitorius HOM05D000238 ORTHO05D007158 1.1e-30 137.1 107 64.5
CsaV3_1G028970 Cucumis sativus L. HOM05D005968 ORTHO05D007158 3.3e-30 135.6 110 62.7
TAR636G0142 Trochodendron aralioides HOM05D002374 ORTHO05D003594 5.6e-30 134.8 69 89.9
TWI34G0179 Tripterygium wilfordii HOM05D005968 ORTHO05D007158 6.2e-29 131.3 110 62.7
Lsat_1_v5_gn_4_18741 Lactuca sativa HOM05D005968 ORTHO05D007158 8.0e-29 131.0 80 76.2
ATR0739G020 Amborella trichopoda HOM05D005968 ORTHO05D007158 4.4e-27 125.2 109 59.6
CDE04G1812 Ceratophyllum demersum HOM05D005968 ORTHO05D007158 7.5e-27 124.4 109 56.9
Actinidia38673 Actinidia chinensis HOM05D005968 ORTHO05D007158 1.3e-26 123.6 75 74.7
AagrBONN_evm.TU.Sc2ySwM_362.192 Anthoceros agrestis HOM05D005968 ORTHO05D007158 2.9e-26 122.5 127 48.8
AUR62029822 Chenopodium quinoa HOM05D005968 ORTHO05D007158 1.4e-25 120.2 78 67.9
unitig_52.g17565 Utricularia gibba HOM05D005968 ORTHO05D007158 6.0e-24 114.8 133 47.4
AUR62006466 Chenopodium quinoa HOM05D005968 ORTHO05D007158 3.1e-20 102.4 61 72.1
Lsat_1_v5_gn_7_66900 Lactuca sativa HOM05D005968 ORTHO05D007158 1.0e-15 87.4 70 64.3
arahy.Tifrunner.gnm1.ann1.4WLG0J Arachis hypogaea HOM05D005968 ORTHO05D007158 1.4e-12 77.0 73 52.1
Eucgr.C02541 Eucalyptus grandis HOM05D005968 ORTHO05D007158 2.3e-12 76.3 91 51.6
Nitab4.5_0003623g0020 Nicotiana tabacum HOM05D005968 ORTHO05D007158 5.2e-12 75.1 39 87.2
arahy.Tifrunner.gnm1.ann1.QXT71M Arachis hypogaea HOM05D005968 ORTHO05D007158 1.2e-11 73.9 38 86.8
SGA_v2.0_scaffold347G49545 Striga asiatica HOM05D005968 ORTHO05D007158 2.6e-11 72.8 39 84.6
Haze_19213 Corylus avellana HOM05D000344 ORTHO05D005296 1.3e-10 70.5 34 88.2
arahy.Tifrunner.gnm1.ann1.VCSM30 Arachis hypogaea HOM05D005968 ORTHO05D007158 2.2e-10 69.7 39 79.5
arahy.Tifrunner.gnm1.ann1.HGKJ8P Arachis hypogaea HOM05D005968 ORTHO05D007158 1.0e-07 60.8 32 84.4
Oeu038782.2 Olea europaea HOM05D005968 ORTHO05D007158 2.5e-06 56.2 48 58.3


User provided reference genes

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