Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc453.1 Carica papaya HOM05D006880 ORTHO05D008638 8.8e-105 383.6 196 100.0
Duzib147G0678 Durio zibethinus HOM05D006880 ORTHO05D008638 1.8e-86 322.8 199 83.4
Thecc.01G120600 Theobroma cacao HOM05D006880 ORTHO05D008638 9.2e-86 320.5 196 85.7
Gohir.A10G083300 Gossypium hirsutum HOM05D006880 ORTHO05D008638 1.6e-85 319.7 196 83.2
Gohir.D10G105600 Gossypium hirsutum HOM05D006880 ORTHO05D008638 1.6e-85 319.7 196 83.2
Gorai.002G151100 Gossypium raimondii HOM05D006880 ORTHO05D008638 3.5e-85 318.5 196 83.7
Duzib187G0911 Durio zibethinus HOM05D006880 ORTHO05D008638 5.9e-85 317.8 196 83.2
COL.COLO4_22415 Corchorus olitorius HOM05D006880 ORTHO05D008638 7.8e-85 317.4 196 85.2
Gorai.011G115200 Gossypium raimondii HOM05D006880 ORTHO05D008638 1.3e-84 316.6 196 82.7
TWI79G0189 Tripterygium wilfordii HOM05D006880 ORTHO05D008638 2.8e-82 308.9 199 79.9
Lalb_Chr08g0238661 Lupinus albus HOM05D006880 ORTHO05D008638 1.0e-81 307.0 197 80.2
CANSAT01G0776 Cannabis sativa HOM05D006880 ORTHO05D008638 1.4e-81 306.6 200 83.0
Atru.chr4.544 Acer truncatum HOM05D006880 ORTHO05D008638 4.0e-81 305.1 200 78.5
CiPaw.03G123600 Carya illinoinensis HOM05D006880 ORTHO05D008638 4.0e-81 305.1 198 80.3
FAN19G0460 Fragaria x ananassa HOM05D006880 ORTHO05D008638 4.0e-81 305.1 201 79.1
Psat5g063920 Pisum sativum HOM05D006880 ORTHO05D008638 6.8e-81 304.3 199 79.4
Ciclev10026534m.g Citrus clementina HOM05D006880 ORTHO05D008638 2.6e-80 302.4 204 77.9
FvH4_1g23610 Fragaria vesca HOM05D006880 ORTHO05D008638 2.6e-80 302.4 201 78.6
FAN28G1236 Fragaria x ananassa HOM05D006880 ORTHO05D008638 2.6e-80 302.4 201 78.6
Phvul.009G147400 Phaseolus vulgaris HOM05D006880 ORTHO05D008638 2.6e-80 302.4 199 80.4
Prupe.6G162500 Prunus persica HOM05D006880 ORTHO05D008638 3.4e-80 302.0 199 78.4
RcHm_v2.0_Chr2g0119191 Rosa chinensis HOM05D006880 ORTHO05D008638 4.4e-80 301.6 201 78.6
TPR.G18722 Trifolium pratense HOM05D006880 ORTHO05D008638 4.4e-80 301.6 201 79.6
Ca_16914_v3 Cicer arietinum L. HOM05D006880 ORTHO05D008638 7.5e-80 300.8 199 79.9
QL06p051802 Quercus lobata HOM05D006880 ORTHO05D008638 9.8e-80 300.4 200 80.0
FAN23G3120 Fragaria x ananassa HOM05D006880 ORTHO05D008638 1.3e-79 300.1 201 77.6
FAN26G3452 Fragaria x ananassa HOM05D006880 ORTHO05D008638 1.3e-79 300.1 201 78.1
Manes.12G148400 Manihot esculenta HOM05D006880 ORTHO05D008638 2.9e-79 298.9 204 79.9
Potri.019G006500 Populus trichocarpa HOM05D006880 ORTHO05D008638 6.4e-79 297.7 201 76.6
CiPaw.04G083800 Carya illinoinensis HOM05D006880 ORTHO05D008638 1.1e-78 297.0 204 75.5
Oeu054906.1 Olea europaea HOM05D006880 ORTHO05D008638 1.1e-78 297.0 203 77.8
Medtr3g095480 Medicago truncatula HOM05D006880 ORTHO05D008638 3.2e-78 295.4 200 79.0
Lalb_Chr11g0068241 Lupinus albus HOM05D006880 ORTHO05D008638 5.4e-78 294.7 198 79.8
Sabra19G0018800 Salix brachista HOM05D006880 ORTHO05D008638 9.2e-78 293.9 201 75.1
Potri.001G309000 Populus trichocarpa HOM05D006880 ORTHO05D008638 1.2e-77 293.5 202 78.7
Sabra16G0194800 Salix brachista HOM05D006880 ORTHO05D008638 1.2e-77 293.5 202 77.2
Lj1g0010031 Lotus japonicus HOM05D006880 ORTHO05D008638 2.7e-77 292.4 197 77.2
Glyma.06G149800 Glycine max HOM05D006880 ORTHO05D008638 4.6e-77 291.6 200 76.5
Aqoxy5G02095 Aquilegia oxysepala HOM05D006880 ORTHO05D008638 6.0e-77 291.2 179 81.0
Actinidia06675 Actinidia chinensis HOM05D006880 ORTHO05D008638 1.0e-76 290.4 196 75.5
Sabra19G0023300 Salix brachista HOM05D006880 ORTHO05D008638 1.0e-76 290.4 201 74.6
HanXRQChr02g0039401 Helianthus annuus HOM05D006880 ORTHO05D008638 1.3e-76 290.0 198 75.3
PSO675G8574 Papaver somniferum HOM05D006880 ORTHO05D008638 8.6e-76 287.3 197 74.6
SGA_v2.0_scaffold178G39501 Striga asiatica HOM05D006880 ORTHO05D008638 8.6e-76 287.3 178 83.1
ECA247G1470 Erigeron canadensis HOM05D006880 ORTHO05D008638 1.9e-75 286.2 197 74.6
Migut.H01108 Erythranthe guttata HOM05D006880 ORTHO05D008638 1.9e-75 286.2 197 76.6
Solyc11g005390.3 Solanum lycopersicum HOM05D006880 ORTHO05D008638 1.9e-75 286.2 198 74.7
Sopen11g001400 Solanum pennellii HOM05D006880 ORTHO05D008638 1.9e-75 286.2 198 74.7
PSO541G1054 Papaver somniferum HOM05D006880 ORTHO05D008638 4.3e-75 285.0 197 74.1
Glyma.09G116700 Glycine max HOM05D006880 ORTHO05D008638 7.3e-75 284.3 198 74.7
Gohir.D11G233000 Gossypium hirsutum HOM05D006880 ORTHO05D008638 9.5e-75 283.9 196 78.1
Hma1.2p1_0006F.1_g004965 Hydrangea macrophylla HOM05D006880 ORTHO05D008638 9.5e-75 283.9 196 75.0
Hma1.2p1_0025F.1_g016260 Hydrangea macrophylla HOM05D006880 ORTHO05D008638 9.5e-75 283.9 196 75.0
Hma1.2p1_1667F.1_g296585 Hydrangea macrophylla HOM05D006880 ORTHO05D008638 9.5e-75 283.9 196 75.0
ClCG01G015680 Citrullus lanatus HOM05D006880 ORTHO05D008638 2.1e-74 282.7 198 73.2
PGSC0003DMG400003965 Solanum tuberosum HOM05D006880 ORTHO05D008638 3.6e-74 282.0 194 74.2
arahy.Tifrunner.gnm1.ann1.546D2B Arachis hypogaea HOM05D006880 ORTHO05D008638 4.7e-74 281.6 177 80.2
arahy.Tifrunner.gnm1.ann1.91R8ME Arachis hypogaea HOM05D006880 ORTHO05D008638 1.1e-73 280.4 204 73.0
Cc07_g17330 Coffea canephora HOM05D006880 ORTHO05D008638 1.4e-73 280.0 201 72.6
Nn1g06089 Nelumbo nucifera HOM05D006880 ORTHO05D008638 1.8e-73 279.6 196 74.0
MELO3C008029.2 Cucumis melo HOM05D006880 ORTHO05D008638 2.3e-73 279.3 179 78.2
Glyma.09G116500 Glycine max HOM05D006880 ORTHO05D008638 1.2e-72 276.9 200 72.0
Lj2A591T43 Lonicera japonica HOM05D006880 ORTHO05D008638 1.5e-72 276.6 196 71.9
TAR628G0678 Trochodendron aralioides HOM05D006880 ORTHO05D008638 5.8e-72 274.6 202 71.8
CSS0034618 Camellia sinensis var. sinensis HOM05D006880 ORTHO05D008638 9.8e-72 273.9 197 74.6
Aa31LG8G5640 Aethionema arabicum HOM05D006880 ORTHO05D008638 6.4e-71 271.2 209 69.4
MD01G1016600 Malus domestica HOM05D006880 ORTHO05D008638 6.4e-71 271.2 197 74.6
GSVIVG01026589001 Vitis vinifera HOM05D006880 ORTHO05D008638 1.1e-70 270.4 168 81.0
PGR119G1657 Punica granatum HOM05D006880 ORTHO05D008638 1.4e-70 270.0 200 73.5
AL3G32180 Arabidopsis lyrata HOM05D006880 ORTHO05D008638 2.4e-70 269.2 203 68.5
Carub.0003s1862 Capsella rubella HOM05D006880 ORTHO05D008638 3.2e-70 268.9 203 69.0
BcaC02g12236 Brassica carinata HOM05D006880 ORTHO05D008638 5.4e-70 268.1 206 68.9
BcaC05g28570 Brassica carinata HOM05D006880 ORTHO05D008638 5.4e-70 268.1 206 68.9
BolC5t33399H Brassica oleracea HOM05D006880 ORTHO05D008638 5.4e-70 268.1 206 68.9
AT3G18800 Arabidopsis thaliana HOM05D006880 ORTHO05D008638 7.0e-70 267.7 203 68.0
C05p46720 Brassica napus HOM05D006880 ORTHO05D008638 1.6e-69 266.5 206 68.9
Sp3g16890 Schrenkiella parvula HOM05D006880 ORTHO05D008638 2.7e-69 265.8 213 66.2
THA.LOC104821864 Tarenaya hassleriana HOM05D006880 ORTHO05D008638 3.5e-69 265.4 179 74.9
CDE08G0745 Ceratophyllum demersum HOM05D006880 ORTHO05D008638 7.8e-69 264.2 178 73.6
BcaB06g25933 Brassica carinata HOM05D006880 ORTHO05D008638 2.3e-68 262.7 207 66.7
HanXRQChr05g0137731 Helianthus annuus HOM05D006880 ORTHO05D008638 6.6e-68 261.2 200 69.5
A05p30800 Brassica napus HOM05D006880 ORTHO05D008638 8.6e-68 260.8 209 66.5
BraA05t21922Z Brassica rapa HOM05D006880 ORTHO05D008638 8.6e-68 260.8 209 66.5
CARHR094210 Cardamine hirsuta HOM05D006880 ORTHO05D008638 8.6e-68 260.8 210 65.7
MBI02_g23402_MAGBIO Magnolia biondii HOM05D006880 ORTHO05D008638 1.9e-67 259.6 177 71.8
Sc03g0004730 Simmondsia chinensis HOM05D006880 ORTHO05D008638 7.3e-67 257.7 174 73.6
Sp1g36150 Schrenkiella parvula HOM05D006880 ORTHO05D008638 1.2e-66 256.9 203 69.5
AUR62017937 Chenopodium quinoa HOM05D006880 ORTHO05D008638 3.6e-66 255.4 212 65.1
ATR0772G040 Amborella trichopoda HOM05D006880 ORTHO05D008638 2.0e-64 249.6 176 72.7
Thhalv10022284m.g Eutrema salsugineum HOM05D006880 ORTHO05D008638 2.2e-63 246.1 209 64.1
Sed0021560 Sechium edule HOM05D006880 ORTHO05D008638 2.2e-63 246.1 172 71.5
HPP92_025026 Vanilla planifolia HOM05D006880 ORTHO05D008638 7.1e-62 241.1 204 64.2
HPP92_025033 Vanilla planifolia HOM05D006880 ORTHO05D008638 7.1e-62 241.1 204 64.2
Nn5g28731 Nelumbo nucifera HOM05D006880 ORTHO05D008638 9.2e-62 240.7 177 68.9
Dinv09943 Davidia involucrata HOM05D006880 ORTHO05D008638 7.3e-59 231.1 174 73.6
CsaV3_6G041940 Cucumis sativus L. HOM05D006880 ORTHO05D008638 2.4e-57 226.1 153 73.9
Peaxi162Scf00025g02313 Petunia axillaris HOM05D006880 ORTHO05D008638 5.8e-56 221.5 152 73.0
CDE06G1704 Ceratophyllum demersum HOM05D006880 ORTHO05D008638 9.2e-54 214.2 146 71.9
BcaC07g37070 Brassica carinata HOM05D006880 ORTHO05D008638 7.3e-51 204.5 197 61.4
Mapoly0012s0135 Marchantia polymorpha HOM05D006880 ORTHO05D008638 5.4e-46 188.3 176 55.1
A08p04110 Brassica napus HOM05D006880 ORTHO05D008638 9.3e-46 187.6 143 69.2
SMO351G0309 Selaginella moellendorffii HOM05D006880 ORTHO05D008638 4.3e-43 178.7 176 51.1
Nn3g21133 Nelumbo nucifera HOM05D006880 ORTHO05D008638 1.8e-41 173.3 177 55.4
Nitab4.5_0023130g0010 Nicotiana tabacum HOM05D006880 ORTHO05D008638 1.4e-38 163.7 107 73.8
SMO196G0105 Selaginella moellendorffii HOM05D006880 ORTHO05D008638 1.9e-38 163.3 175 48.0
Nitab4.5_0011433g0020 Nicotiana tabacum HOM05D006880 ORTHO05D008638 2.4e-38 162.9 107 73.8
DCAR_016722 Daucus carota HOM05D006880 ORTHO05D008638 1.6e-37 160.2 100 79.0
AagrBONN_evm.TU.Sc2ySwM_228.250 Anthoceros agrestis HOM05D006880 ORTHO05D008638 4.6e-37 158.7 174 48.3
Nn8g40983 Nelumbo nucifera HOM05D006880 ORTHO05D008638 8.1e-34 147.9 175 49.7
Os04g0687200 Oryza sativa ssp. japonica HOM05D006880 ORTHO05D008638 6.0e-29 131.7 116 56.0
Eucgr.B01306 Eucalyptus grandis HOM05D006880 ORTHO05D008638 6.5e-23 111.7 131 48.1
Lj6g0028046 Lotus japonicus HOM05D006880 ORTHO05D008638 9.7e-19 97.8 66 71.2
Nn3g19205 Nelumbo nucifera HOM05D006880 ORTHO05D008638 6.1e-13 78.6 64 62.5
BraA08t32436Z Brassica rapa HOM05D006880 ORTHO05D008638 3.3e-11 72.8 57 70.2
Eucgr.B00961 Eucalyptus grandis HOM05D006880 ORTHO05D008638 9.7e-11 71.2 49 69.4
Nn8g39713 Nelumbo nucifera HOM05D006880 ORTHO05D008638 7.2e-06 55.1 33 72.7


User provided reference genes

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