Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc45.26 Carica papaya HOM05D007104 ORTHO05D008851 7.2e-190 667.5 463 100.0
Thecc.05G052200 Theobroma cacao HOM05D007104 ORTHO05D008851 4.6e-96 355.9 535 60.9
CiPaw.09G181900 Carya illinoinensis HOM05D007104 ORTHO05D008851 2.3e-95 353.6 539 59.4
Duzib128G0648 Durio zibethinus HOM05D007104 ORTHO05D008851 5.1e-95 352.4 536 60.4
Gorai.009G420800 Gossypium raimondii HOM05D007104 ORTHO05D008851 1.3e-93 347.8 536 59.5
GSVIVG01025541001 Vitis vinifera HOM05D007104 ORTHO05D008851 6.3e-93 345.5 537 60.7
Dinv35696 Davidia involucrata HOM05D007104 ORTHO05D008851 1.4e-92 344.4 528 60.4
Gohir.A04G077100 Gossypium hirsutum HOM05D007104 ORTHO05D008851 1.8e-92 344.0 536 59.5
PGR004G2266 Punica granatum HOM05D007104 ORTHO05D008851 1.0e-90 338.2 520 59.4
Ciclev10011055m.g Citrus clementina HOM05D007104 ORTHO05D008851 5.5e-89 332.4 531 59.1
TPR.G36926 Trifolium pratense HOM05D007104 ORTHO05D008851 6.1e-88 328.9 537 55.3
Cfa017487 Carpinus fangiana HOM05D007104 ORTHO05D008851 5.2e-87 325.9 524 59.5
TAR633G1446 Trochodendron aralioides HOM05D007104 ORTHO05D008851 8.8e-87 325.1 539 58.4
Ca_08818_v3 Cicer arietinum L. HOM05D007104 ORTHO05D008851 4.4e-86 322.8 526 56.5
Manes.08G001800 Manihot esculenta HOM05D007104 ORTHO05D008851 1.3e-85 321.2 534 57.5
Psat3g045920 Pisum sativum HOM05D007104 ORTHO05D008851 1.7e-85 320.9 536 55.8
CSS0009185 Camellia sinensis var. sinensis HOM05D007104 ORTHO05D008851 2.8e-85 320.1 531 57.3
VMungo1383G0332 Vigna mungo HOM05D007104 ORTHO05D008851 2.8e-85 320.1 537 55.5
Eucgr.K03203 Eucalyptus grandis HOM05D007104 ORTHO05D008851 6.3e-85 318.9 501 59.5
Haze_20670 Corylus avellana HOM05D007104 ORTHO05D008851 1.1e-84 318.2 527 59.4
QL07p045556 Quercus lobata HOM05D007104 ORTHO05D008851 1.1e-84 318.2 541 57.7
C09p73820 Brassica napus HOM05D007104 ORTHO05D008851 1.8e-84 317.4 539 54.5
BolC9t60116H Brassica oleracea HOM05D007104 ORTHO05D008851 1.8e-84 317.4 539 54.5
Lj1g0014647 Lotus japonicus HOM05D007104 ORTHO05D008851 1.8e-84 317.4 536 56.7
Lalb_Chr20g0112911 Lupinus albus HOM05D007104 ORTHO05D008851 2.4e-84 317.0 538 54.8
Thhalv10012661m.g Eutrema salsugineum HOM05D007104 ORTHO05D008851 4.1e-84 316.2 544 47.1
Glyma.19G177700 Glycine max HOM05D007104 ORTHO05D008851 5.3e-84 315.8 537 56.4
AT5G02830 Arabidopsis thaliana HOM05D007104 ORTHO05D008851 7.7e-83 312.0 530 55.3
BcaC06g32013 Brassica carinata HOM05D007104 ORTHO05D008851 7.7e-83 312.0 540 54.8
A10p32890 Brassica napus HOM05D007104 ORTHO05D008851 1.0e-82 311.6 539 54.9
BraA10t45326Z Brassica rapa HOM05D007104 ORTHO05D008851 1.0e-82 311.6 539 54.9
Carub.0006s0163 Capsella rubella HOM05D007104 ORTHO05D008851 1.0e-82 311.6 537 55.1
COL.COLO4_27102 Corchorus olitorius HOM05D007104 ORTHO05D008851 1.7e-82 310.8 471 63.5
Sp6g39750 Schrenkiella parvula HOM05D007104 ORTHO05D008851 1.7e-82 310.8 539 55.5
Phvul.001G174000 Phaseolus vulgaris HOM05D007104 ORTHO05D008851 2.2e-82 310.5 537 55.5
THA.LOC104826989 Tarenaya hassleriana HOM05D007104 ORTHO05D008851 2.2e-82 310.5 541 57.1
Actinidia05278 Actinidia chinensis HOM05D007104 ORTHO05D008851 2.9e-82 310.1 534 56.9
Hma1.2p1_0111F.1_g053700 Hydrangea macrophylla HOM05D007104 ORTHO05D008851 2.9e-82 310.1 536 57.5
Medtr7g100550 Medicago truncatula HOM05D007104 ORTHO05D008851 5.0e-82 309.3 538 56.7
Sed0027238 Sechium edule HOM05D007104 ORTHO05D008851 6.5e-82 308.9 534 56.6
AL6G12100 Arabidopsis lyrata HOM05D007104 ORTHO05D008851 2.5e-81 307.0 533 55.0
CANSAT80G1630 Cannabis sativa HOM05D007104 ORTHO05D008851 7.2e-81 305.4 535 57.0
Potri.006G132700 Populus trichocarpa HOM05D007104 ORTHO05D008851 3.6e-80 303.1 535 56.1
CsaV3_4G024380 Cucumis sativus L. HOM05D007104 ORTHO05D008851 4.7e-80 302.8 534 56.4
DCAR_017721 Daucus carota HOM05D007104 ORTHO05D008851 6.1e-80 302.4 526 57.4
Sabra06G0104200 Salix brachista HOM05D007104 ORTHO05D008851 8.0e-80 302.0 535 54.4
arahy.Tifrunner.gnm1.ann1.UD3AFU Arachis hypogaea HOM05D007104 ORTHO05D008851 1.0e-79 301.6 569 43.1
arahy.Tifrunner.gnm1.ann1.Z3T1FA Arachis hypogaea HOM05D007104 ORTHO05D008851 1.0e-79 301.6 569 43.1
Sc01g0003660 Simmondsia chinensis HOM05D007104 ORTHO05D008851 1.8e-79 300.8 536 54.5
TWI18G0316 Tripterygium wilfordii HOM05D007104 ORTHO05D008851 1.8e-79 300.8 540 55.9
Nitab4.5_0006316g0040 Nicotiana tabacum HOM05D007104 ORTHO05D008851 7.5e-78 295.4 535 55.3
EL10Ac7g17325 Beta vulgaris HOM05D007104 ORTHO05D008851 9.7e-78 295.0 534 46.1
AUR62040527 Chenopodium quinoa HOM05D007104 ORTHO05D008851 9.7e-78 295.0 541 47.1
CAN.G350.45 Capsicum annuum HOM05D007104 ORTHO05D008851 1.3e-77 294.7 542 54.8
Peaxi162Scf00005g05111 Petunia axillaris HOM05D007104 ORTHO05D008851 1.3e-77 294.7 534 55.6
Glyma.03G177000 Glycine max HOM05D007104 ORTHO05D008851 3.7e-77 293.1 523 55.1
FvH4_6g15120 Fragaria vesca HOM05D007104 ORTHO05D008851 1.1e-76 291.6 538 54.3
FAN05G0960 Fragaria x ananassa HOM05D007104 ORTHO05D008851 1.1e-76 291.6 538 54.3
FAN14G4814 Fragaria x ananassa HOM05D007104 ORTHO05D008851 1.1e-76 291.6 538 54.3
Sopen09g002070 Solanum pennellii HOM05D007104 ORTHO05D008851 2.4e-76 290.4 533 54.2
Solyc09g007200.4 Solanum lycopersicum HOM05D007104 ORTHO05D008851 5.3e-76 289.3 533 54.2
Prupe.6G243100 Prunus persica HOM05D007104 ORTHO05D008851 1.2e-75 288.1 537 55.1
vmacro08689 Vaccinium macrocarpon HOM05D007104 ORTHO05D008851 1.2e-75 288.1 530 54.9
Nn2g12960 Nelumbo nucifera HOM05D007104 ORTHO05D008851 2.7e-75 287.0 539 56.4
FAN09G1206 Fragaria x ananassa HOM05D007104 ORTHO05D008851 4.5e-75 286.2 538 53.9
RcHm_v2.0_Chr3g0468421 Rosa chinensis HOM05D007104 ORTHO05D008851 1.0e-74 285.0 538 54.6
Aa31LG1G22070 Aethionema arabicum HOM05D007104 ORTHO05D008851 1.3e-74 284.6 572 43.7
Lj3C977G16 Lonicera japonica HOM05D007104 ORTHO05D008851 1.1e-73 281.6 544 50.9
Nitab4.5_0000848g0180 Nicotiana tabacum HOM05D007104 ORTHO05D008851 1.9e-73 280.8 535 46.0
MSTRG.19128 Avicennia marina HOM05D007104 ORTHO05D008851 2.5e-73 280.4 511 55.4
PSO339G1446 Papaver somniferum HOM05D007104 ORTHO05D008851 3.2e-73 280.0 549 53.9
MBI05_g33311_MAGBIO Magnolia biondii HOM05D007104 ORTHO05D008851 2.3e-71 273.9 536 53.4
PSO384G2670 Papaver somniferum HOM05D007104 ORTHO05D008851 3.0e-71 273.5 549 53.6
ClCG04G008780 Citrullus lanatus HOM05D007104 ORTHO05D008851 5.2e-71 272.7 536 53.9
Gohir.D04G116200 Gossypium hirsutum HOM05D007104 ORTHO05D008851 6.8e-71 272.3 428 63.8
Cc06_g03420 Coffea canephora HOM05D007104 ORTHO05D008851 1.5e-70 271.2 535 53.6
MD12G1126500 Malus domestica HOM05D007104 ORTHO05D008851 3.7e-69 266.5 537 51.2
HanXRQChr05g0129241 Helianthus annuus HOM05D007104 ORTHO05D008851 6.3e-69 265.8 537 52.7
Migut.J00404 Erythranthe guttata HOM05D007104 ORTHO05D008851 1.8e-68 264.2 530 52.3
Lsat_1_v5_gn_2_109900 Lactuca sativa HOM05D007104 ORTHO05D008851 1.2e-67 261.5 541 52.3
ECA238G4406 Erigeron canadensis HOM05D001465 ORTHO05D001434 4.5e-67 259.6 546 46.2
SGA_v2.0_scaffold126G33879 Striga asiatica HOM05D007104 ORTHO05D008851 1.1e-65 255.0 518 52.9
ATR0594G196 Amborella trichopoda HOM05D007104 ORTHO05D008851 2.5e-65 253.8 540 50.6
SalBow3G1198 Salvia bowleyana HOM05D007104 ORTHO05D008851 5.7e-62 242.7 547 42.6
Hund12063 Selenicereus undatus HOM05D007104 ORTHO05D008851 1.6e-59 234.6 510 44.7
MELO3C003069.2 Cucumis melo HOM05D007104 ORTHO05D008851 1.7e-58 231.1 539 39.7
Os03g0284900 Oryza sativa ssp. japonica HOM05D007104 ORTHO05D008851 1.1e-52 211.8 523 39.6
Oeu034822.1 Olea europaea HOM05D007104 ORTHO05D008851 1.5e-49 201.4 393 48.3
Atru.chr8.2537 Acer truncatum HOM05D007104 ORTHO05D008851 3.3e-49 200.3 407 54.1
HPP92_003603 Vanilla planifolia HOM05D007104 ORTHO05D008851 4.3e-49 199.9 481 49.7
Aqoxy2G01885 Aquilegia oxysepala HOM05D007104 ORTHO05D008851 8.6e-42 175.6 252 63.5
SEGI_02163 Sequoiadendron giganteum HOM05D007104 ORTHO05D008851 1.2e-38 165.2 556 44.6
AUR62042917 Chenopodium quinoa HOM05D007104 ORTHO05D008851 1.9e-36 157.9 536 30.0
Pp3c22_3070 Physcomitrium patens HOM05D007104 ORTHO05D008851 2.5e-33 147.5 540 44.4
Mapoly0039s0098 Marchantia polymorpha HOM05D007104 ORTHO05D008851 2.1e-32 144.4 511 44.4
Pp3c21_12360 Physcomitrium patens HOM05D007104 ORTHO05D008851 1.6e-27 128.3 530 43.0
CDE02G1389 Ceratophyllum demersum HOM05D007104 ORTHO05D008851 2.6e-22 110.9 309 44.0
Zm00001eb397200 Zea mays HOM05D007104 ORTHO05D008851 5.8e-22 109.8 535 23.9
CARHR210500 Cardamine hirsuta HOM05D007104 ORTHO05D008851 5.4e-20 103.2 228 32.5
unitig_16.g32855 Utricularia gibba HOM05D007104 ORTHO05D008851 2.5e-17 94.4 220 34.5
SMO351G0222 Selaginella moellendorffii HOM05D007104 ORTHO05D008851 2.4e-12 77.8 261 37.9


User provided reference genes

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