Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc443.1 Carica papaya HOM05D004482 ORTHO05D005212 1.7e-191 672.5 355 100.0
COL.COLO4_20166 Corchorus olitorius HOM05D004482 ORTHO05D005212 1.1e-142 510.4 354 76.3
Gohir.D02G025500 Gossypium hirsutum HOM05D004482 ORTHO05D005212 4.4e-139 498.4 356 75.8
Gorai.005G031400 Gossypium raimondii HOM05D004482 ORTHO05D005212 1.3e-138 496.9 356 75.6
Prupe.1G010300 Prunus persica HOM05D004482 ORTHO05D005212 1.7e-138 496.5 353 74.8
Thecc.04G200900 Theobroma cacao HOM05D004482 ORTHO05D005212 2.2e-138 496.1 354 74.6
Gohir.A02G021300 Gossypium hirsutum HOM05D004482 ORTHO05D005212 1.6e-136 490.0 356 74.4
Atru.chr4.1674 Acer truncatum HOM05D004482 ORTHO05D005212 6.6e-135 484.6 338 76.3
MD00G1113200 Malus domestica HOM05D004482 ORTHO05D005212 2.5e-134 482.6 353 73.1
Gohir.D02G027800 Gossypium hirsutum HOM05D004482 ORTHO05D005212 5.6e-134 481.5 356 74.2
Ciclev10005271m.g Citrus clementina HOM05D004482 ORTHO05D005212 2.8e-133 479.2 342 74.3
Duzib151G0803 Durio zibethinus HOM05D004482 ORTHO05D005212 1.1e-132 477.2 372 70.7
MD04G1010600 Malus domestica HOM05D004482 ORTHO05D005212 1.4e-132 476.9 353 72.2
Duzib212G0483 Durio zibethinus HOM05D004482 ORTHO05D005212 2.4e-132 476.1 354 71.2
GSVIVG01020907001 Vitis vinifera HOM05D004482 ORTHO05D005212 4.5e-131 471.9 345 73.6
Cfa014938 Carpinus fangiana HOM05D004482 ORTHO05D005212 7.6e-131 471.1 353 72.0
RcHm_v2.0_Chr4g0414711 Rosa chinensis HOM05D004482 ORTHO05D005212 2.2e-130 469.5 340 73.8
MELO3C020442.2 Cucumis melo HOM05D004482 ORTHO05D005212 6.4e-130 468.0 339 74.0
TAR362G0107 Trochodendron aralioides HOM05D004482 ORTHO05D005212 1.1e-129 467.2 352 70.5
CsaV3_2G011600 Cucumis sativus L. HOM05D004482 ORTHO05D005212 1.9e-129 466.5 345 72.8
Cc03_g07940 Coffea canephora HOM05D004482 ORTHO05D005212 3.2e-129 465.7 353 70.5
FAN12G3502 Fragaria x ananassa HOM05D004482 ORTHO05D005212 4.2e-129 465.3 355 71.5
Manes.15G054600 Manihot esculenta HOM05D004482 ORTHO05D005212 1.2e-128 463.8 354 70.3
Cpa.g.sc173.9 Carica papaya HOM05D004482 ORTHO05D005212 3.5e-128 462.2 294 84.0
FvH4_4g13790 Fragaria vesca HOM05D004482 ORTHO05D005212 1.0e-127 460.7 353 71.4
FAN17G0447 Fragaria x ananassa HOM05D004482 ORTHO05D005212 1.5e-126 456.8 377 67.6
CiPaw.01G120200 Carya illinoinensis HOM05D004482 ORTHO05D005212 1.9e-126 456.4 353 70.0
Gohir.D02G027400 Gossypium hirsutum HOM05D004482 ORTHO05D005212 2.8e-125 452.6 356 70.2
Lj3C404T0 Lonicera japonica HOM05D004482 ORTHO05D005212 1.1e-124 450.7 342 71.3
Actinidia11419 Actinidia chinensis HOM05D004482 ORTHO05D005212 2.4e-124 449.5 340 70.6
Sed0016107 Sechium edule HOM05D004482 ORTHO05D005212 2.4e-124 449.5 342 70.5
Lj3A407G37 Lonicera japonica HOM05D004482 ORTHO05D005212 5.3e-124 448.4 353 69.7
Peaxi162Scf00753g00331 Petunia axillaris HOM05D004482 ORTHO05D005212 6.9e-124 448.0 339 69.6
Potri.017G056800 Populus trichocarpa HOM05D004482 ORTHO05D005212 1.2e-123 447.2 358 67.6
ClCG06G007870 Citrullus lanatus HOM05D004482 ORTHO05D005212 1.7e-122 443.4 362 68.5
TWI73G1291 Tripterygium wilfordii HOM05D004482 ORTHO05D005212 4.9e-122 441.8 352 68.8
CANSAT78G1841 Cannabis sativa HOM05D004482 ORTHO05D005212 6.4e-122 441.4 356 67.4
Sed0019182 Sechium edule HOM05D004482 ORTHO05D005212 1.1e-121 440.7 346 70.2
PGR083G2076 Punica granatum HOM05D004482 ORTHO05D005212 1.9e-121 439.9 342 70.8
Hma1.2p1_0187F.1_g082340 Hydrangea macrophylla HOM05D004482 ORTHO05D005212 3.2e-121 439.1 361 66.2
Sopen09g034910 Solanum pennellii HOM05D004482 ORTHO05D005212 4.2e-121 438.7 346 67.3
Solyc09g092030.4 Solanum lycopersicum HOM05D004482 ORTHO05D005212 3.5e-120 435.6 346 67.3
Aa31LG5G4410 Aethionema arabicum HOM05D004482 ORTHO05D005212 2.3e-119 433.0 391 62.1
Sp4g15100 Schrenkiella parvula HOM05D004482 ORTHO05D005212 2.3e-119 433.0 355 65.9
A03p18310 Brassica napus HOM05D004482 ORTHO05D005212 1.9e-118 429.9 354 66.7
Carub.0004s1412 Capsella rubella HOM05D004482 ORTHO05D005212 2.5e-118 429.5 355 64.8
BolC3t14519H Brassica oleracea HOM05D004482 ORTHO05D005212 3.3e-118 429.1 354 66.7
CAN.G1333.13 Capsicum annuum HOM05D004482 ORTHO05D005212 4.3e-118 428.7 337 68.2
AL4G28200 Arabidopsis lyrata HOM05D004482 ORTHO05D005212 5.6e-118 428.3 354 65.3
THA.LOC104826120 Tarenaya hassleriana HOM05D004482 ORTHO05D005212 9.6e-118 427.6 356 64.9
MSTRG.24610 Avicennia marina HOM05D004482 ORTHO05D005212 1.6e-117 426.8 357 65.0
BcaC02g07886 Brassica carinata HOM05D004482 ORTHO05D005212 1.6e-117 426.8 351 65.2
ECA233G3015 Erigeron canadensis HOM05D004482 ORTHO05D005212 1.6e-117 426.8 337 67.1
Oeu013809.1 Olea europaea HOM05D004482 ORTHO05D005212 2.1e-117 426.4 371 65.2
C03p21360 Brassica napus HOM05D004482 ORTHO05D005212 2.8e-117 426.0 354 66.4
Rhsim02G0059000 Rhododendron simsii HOM05D004482 ORTHO05D005212 2.8e-117 426.0 399 60.4
BolC4t27707H Brassica oleracea HOM05D004482 ORTHO05D005212 3.7e-117 425.6 351 65.2
A04p25280 Brassica napus HOM05D004482 ORTHO05D005212 8.2e-117 424.5 355 65.4
AT2G32760 Arabidopsis thaliana HOM05D004482 ORTHO05D005212 2.4e-116 422.9 354 64.4
BraA04t18031Z Brassica rapa HOM05D004482 ORTHO05D005212 2.4e-116 422.9 351 65.0
FAN22G1791 Fragaria x ananassa HOM05D004482 ORTHO05D005212 9.0e-116 421.0 461 54.7
BraA03t11091Z Brassica rapa HOM05D004482 ORTHO05D005212 1.5e-115 420.2 354 65.3
Lj4g0012954 Lotus japonicus HOM05D004482 ORTHO05D005212 2.0e-115 419.9 341 67.2
Peaxi162Scf00047g00420 Petunia axillaris HOM05D004482 ORTHO05D005212 3.4e-115 419.1 413 57.4
Migut.N00400 Erythranthe guttata HOM05D004482 ORTHO05D005212 4.9e-114 415.2 357 62.5
HanXRQChr02g0059021 Helianthus annuus HOM05D004482 ORTHO05D005212 1.4e-113 413.7 348 63.8
SGA_v2.0_scaffold31G12588 Striga asiatica HOM05D004482 ORTHO05D005212 4.2e-113 412.1 357 62.2
Glyma.05G154100 Glycine max HOM05D004482 ORTHO05D005212 5.5e-113 411.8 352 65.3
Psat7g074240 Pisum sativum HOM05D004482 ORTHO05D005212 4.6e-112 408.7 339 65.8
Lalb_Chr07g0186731 Lupinus albus HOM05D004482 ORTHO05D005212 1.8e-111 406.8 339 66.1
C04p62340 Brassica napus HOM05D000474 ORTHO05D005212 3.0e-111 406.0 369 61.8
arahy.Tifrunner.gnm1.ann1.ENCW2M Arachis hypogaea HOM05D004482 ORTHO05D005212 3.9e-111 405.6 369 62.6
Lsat_1_v5_gn_6_61160 Lactuca sativa HOM05D004482 ORTHO05D005212 1.5e-110 403.7 344 62.8
Glyma.08G111900 Glycine max HOM05D004482 ORTHO05D005212 2.5e-110 402.9 347 64.6
HanXRQChr16g0497991 Helianthus annuus HOM05D004482 ORTHO05D005212 3.3e-110 402.5 338 64.2
Medtr8g085350 Medicago truncatula HOM05D004482 ORTHO05D005212 7.4e-110 401.4 352 62.8
Gorai.006G223000 Gossypium raimondii HOM05D004482 ORTHO05D005212 9.7e-110 401.0 315 68.9
TPR.G11944 Trifolium pratense HOM05D004482 ORTHO05D005212 2.2e-109 399.8 339 64.9
AUR62018590 Chenopodium quinoa HOM05D004482 ORTHO05D005212 3.7e-109 399.1 339 61.7
QL06p025411 Quercus lobata HOM05D004482 ORTHO05D005212 4.8e-109 398.7 306 69.9
Gohir.A09G205700 Gossypium hirsutum HOM05D004482 ORTHO05D005212 6.9e-108 394.8 303 69.6
Gohir.D09G199300 Gossypium hirsutum HOM05D004482 ORTHO05D005212 9.0e-108 394.4 303 70.0
Dinv27224 Davidia involucrata HOM05D004482 ORTHO05D005212 7.7e-107 391.3 279 72.4
vmacro15546 Vaccinium macrocarpon HOM05D004482 ORTHO05D005212 1.3e-106 390.6 474 50.8
BcaB06g28632 Brassica carinata HOM05D004482 ORTHO05D005212 2.9e-106 389.4 348 63.8
FAN07G1054 Fragaria x ananassa HOM05D004482 ORTHO05D005212 1.1e-105 387.5 339 64.6
Aqoxy2G00031 Aquilegia oxysepala HOM05D004482 ORTHO05D005212 1.9e-105 386.7 337 60.8
Nn3g19571 Nelumbo nucifera HOM05D004482 ORTHO05D005212 1.9e-105 386.7 349 62.5
Hund18995 Selenicereus undatus HOM05D004482 ORTHO05D005212 1.9e-105 386.7 369 57.7
Ah.11g041390 Amaranthus hybridus HOM05D004482 ORTHO05D005212 2.5e-105 386.3 341 61.0
EL10Ac4g09020 Beta vulgaris HOM05D004482 ORTHO05D005212 1.2e-104 384.0 339 60.5
Haze_11622 Corylus avellana HOM05D004482 ORTHO05D005212 2.1e-104 383.3 566 45.6
AUR62020829 Chenopodium quinoa HOM05D004482 ORTHO05D005212 1.8e-103 380.2 354 58.2
Nitab4.5_0000401g0030 Nicotiana tabacum HOM05D004482 ORTHO05D005212 3.9e-103 379.0 302 68.5
arahy.Tifrunner.gnm1.ann1.R808EC Arachis hypogaea HOM05D004482 ORTHO05D005212 6.7e-103 378.3 313 67.4
PGSC0003DMG400026426 Solanum tuberosum HOM05D004482 ORTHO05D005212 1.5e-102 377.1 308 65.9
Nitab4.5_0006210g0070 Nicotiana tabacum HOM05D004482 ORTHO05D005212 2.0e-102 376.7 302 68.5
Thhalv10016939m.g Eutrema salsugineum HOM05D004482 ORTHO05D005212 8.2e-101 371.3 294 67.0
unitig_8.g4998 Utricularia gibba HOM05D004482 ORTHO05D005212 1.8e-100 370.2 338 60.4
Eucgr.H02773 Eucalyptus grandis HOM05D004482 ORTHO05D005212 2.4e-100 369.8 309 67.0
ATR1096G138 Amborella trichopoda HOM05D004482 ORTHO05D005212 9.1e-100 367.9 373 57.1
CARHR126650 Cardamine hirsuta HOM05D004482 ORTHO05D005212 3.4e-99 365.9 294 65.6
Lalb_Chr21g0313021 Lupinus albus HOM05D004482 ORTHO05D005212 2.2e-98 363.2 293 67.2
Nn3g19999 Nelumbo nucifera HOM05D004482 ORTHO05D005212 2.9e-98 362.8 336 61.3
PSO339G2282 Papaver somniferum HOM05D004482 ORTHO05D005212 8.5e-98 361.3 349 57.3
Ca_17968_v3 Cicer arietinum L. HOM05D004482 ORTHO05D005212 1.6e-96 357.1 320 63.8
MBI19_g24734_MAGBIO Magnolia biondii HOM05D004482 ORTHO05D005212 2.3e-95 353.2 407 52.3
Gohir.D02G025900 Gossypium hirsutum HOM05D004482 ORTHO05D005212 1.3e-93 347.4 225 80.4
PSO384G1658 Papaver somniferum HOM05D004482 ORTHO05D005212 1.0e-90 337.8 349 55.3
Sc19g0007180 Simmondsia chinensis HOM05D004482 ORTHO05D005212 5.0e-90 335.5 271 66.4
Dinv38218 Davidia involucrata HOM05D004482 ORTHO05D005212 2.1e-88 330.1 248 70.6
Phvul.003G290900 Phaseolus vulgaris HOM05D004482 ORTHO05D005212 6.7e-87 325.1 317 59.6
HPP92_017061 Vanilla planifolia HOM05D004482 ORTHO05D005212 1.7e-85 320.5 349 52.1
MBI19_g24366_MAGBIO Magnolia biondii HOM05D004482 ORTHO05D005212 4.1e-84 315.8 306 58.2
Lsat_1_v5_gn_2_46161 Lactuca sativa HOM05D004482 ORTHO05D005212 5.7e-78 295.4 307 53.1
CDE08G1272 Ceratophyllum demersum HOM05D004482 ORTHO05D005212 1.3e-77 294.3 352 48.9
HanXRQChr10g0277641 Helianthus annuus HOM05D004482 ORTHO05D005212 1.7e-77 293.9 301 56.5
BcaNung06790 Brassica carinata HOM05D004482 ORTHO05D005212 6.3e-77 292.0 266 62.8
Oeu006195.1 Olea europaea HOM05D004482 ORTHO05D005212 6.3e-77 292.0 319 55.5
Os06g0715000 Oryza sativa ssp. japonica HOM05D004482 ORTHO05D005212 6.3e-77 292.0 344 49.4
CDE09G1401 Ceratophyllum demersum HOM05D004482 ORTHO05D005212 1.1e-73 281.2 346 48.6
Duzib212G1026 Durio zibethinus HOM05D004482 ORTHO05D005212 3.6e-64 249.6 164 75.0
DCAR_001940 Daucus carota HOM05D004482 ORTHO05D005212 6.1e-64 248.8 333 46.2
SalBow3G0632 Salvia bowleyana HOM05D004482 ORTHO05D005212 4.0e-63 246.1 232 61.6
Gohir.D02G026860 Gossypium hirsutum HOM05D004482 ORTHO05D005212 5.7e-62 242.3 239 62.8
DCAR_012443 Daucus carota HOM05D004482 ORTHO05D005212 1.5e-57 227.6 154 72.7
Peaxi162Scf61983g00004 Petunia axillaris HOM05D004482 ORTHO05D005212 3.7e-53 213.0 128 81.2
Pp3c14_26480 Physcomitrium patens HOM05D004482 ORTHO05D005212 2.0e-51 207.2 332 38.9
Zm00001eb405320 Zea mays HOM05D004482 ORTHO05D005212 2.7e-51 206.8 206 54.9
VMungo0251G0011 Vigna mungo HOM05D004482 ORTHO05D005212 1.3e-50 204.5 161 69.6
Mapoly0173s0024 Marchantia polymorpha HOM05D004482 ORTHO05D005212 3.6e-48 196.4 369 34.4
SEGI_24214 Sequoiadendron giganteum HOM05D004482 ORTHO05D005212 3.1e-47 193.4 359 38.4
ECA238G0855 Erigeron canadensis HOM05D000097 ORTHO05D000041 5.2e-47 192.6 172 59.3
AagrBONN_evm.TU.Sc2ySwM_228.2912 Anthoceros agrestis HOM05D004482 ORTHO05D005212 1.7e-45 187.6 316 38.9
Oeu006194.1 Olea europaea HOM05D004482 ORTHO05D005212 1.1e-44 184.9 195 54.9
Gohir.D02G025833 Gossypium hirsutum HOM05D004482 ORTHO05D005212 3.2e-44 183.3 137 69.3
Sabra17G0048500 Salix brachista HOM05D004482 ORTHO05D005212 1.6e-43 181.0 114 78.1
Sabra17G0050200 Salix brachista HOM05D004482 ORTHO05D005212 1.6e-43 181.0 114 78.1
SMO334G0086 Selaginella moellendorffii HOM05D004482 ORTHO05D005212 4.3e-41 172.9 307 37.1
Os05g0490500 Oryza sativa ssp. japonica HOM05D004482 ORTHO05D005212 3.0e-34 150.2 233 42.1
FAN16G2719 Fragaria x ananassa HOM05D004482 ORTHO05D005212 6.6e-34 149.1 131 68.7
Oeu008667.1 Olea europaea HOM05D004482 ORTHO05D005212 3.6e-32 143.3 102 70.6
BcaB01g01629 Brassica carinata HOM05D004482 ORTHO05D005212 3.1e-31 140.2 229 44.5
TWI09G0568 Tripterygium wilfordii HOM05D004482 ORTHO05D005212 9.9e-30 135.2 129 60.5
CBR_g30986 Chara braunii HOM05D000019 ORTHO05D000048 2.5e-25 120.6 152 44.7
VMungo0251G0179 Vigna mungo HOM05D004482 ORTHO05D005212 4.3e-25 119.8 129 56.6
DCAR_012442 Daucus carota HOM05D004482 ORTHO05D005212 2.4e-20 104.0 105 56.2
MCO09G655 Micromonas commoda HOM05D004482 ORTHO05D005212 2.4e-20 104.0 298 31.2
EL10Ac4g09026 Beta vulgaris HOM05D004482 ORTHO05D005212 1.1e-17 95.1 86 58.1
CDE09G0489 Ceratophyllum demersum HOM05D004482 ORTHO05D005212 2.5e-17 94.0 124 47.6
Cpa.g.sc173.8 Carica papaya HOM05D004482 ORTHO05D005212 9.6e-17 92.0 71 69.0
BcaC08g43547 Brassica carinata HOM05D004482 ORTHO05D005212 3.3e-09 67.0 84 48.8
BolC4t26969H Brassica oleracea HOM05D004482 ORTHO05D005212 9.6e-09 65.5 69 52.2
BcaC02g08439 Brassica carinata HOM05D004482 ORTHO05D005212 1.3e-08 65.1 84 48.8
C04p54180 Brassica napus HOM05D004482 ORTHO05D005212 1.6e-08 64.7 69 52.2
C08p00860 Brassica napus HOM05D004482 ORTHO05D005212 6.2e-08 62.8 70 55.7
C07p07110 Brassica napus HOM05D000057 ORTHO05D005212 1.1e-07 62.0 89 47.2
BolC7t41130H Brassica oleracea HOM05D000057 ORTHO05D005212 1.1e-07 62.0 89 47.2
Actinidia39240 Actinidia chinensis HOM05D000280 ORTHO05D000632 4.0e-07 60.1 59 61.0
Zm00001eb291290 Zea mays HOM05D004482 ORTHO05D005212 4.0e-07 60.1 234 26.1
A10p31820 Brassica napus HOM05D004482 ORTHO05D005212 6.9e-07 59.3 55 56.4
BraA10t45227Z Brassica rapa HOM05D004482 ORTHO05D005212 6.9e-07 59.3 55 56.4


User provided reference genes

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