Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc442.3 Carica papaya HOM05D000007 ORTHO05D000039 2.1e-54 215.3 98 100.0
Cpa.g.c27218.3 Carica papaya HOM05D000007 ORTHO05D000039 9.7e-44 179.9 96 83.3
Cpa.g.sc17.141 Carica papaya HOM05D000007 ORTHO05D000039 9.7e-44 179.9 96 83.3
Cpa.g.sc17.138 Carica papaya HOM05D000007 ORTHO05D000039 1.5e-36 156.0 98 73.5
Cpa.g.sc51.32 Carica papaya HOM05D000007 ORTHO05D000039 3.3e-36 154.8 94 68.1
vmacro10317 Vaccinium macrocarpon HOM05D000007 ORTHO05D000039 3.6e-14 81.6 90 34.4
CiPaw.07G024100 Carya illinoinensis HOM05D000007 ORTHO05D000039 4.7e-14 81.3 86 36.0
CiPaw.07G024300 Carya illinoinensis HOM05D000007 ORTHO05D000039 8.0e-14 80.5 86 36.0
Actinidia10577 Actinidia chinensis HOM05D000007 ORTHO05D000039 3.0e-13 78.6 86 39.5
QL03p020720 Quercus lobata HOM05D000007 ORTHO05D000039 1.2e-12 76.6 82 40.2
QL03p020743 Quercus lobata HOM05D000007 ORTHO05D000039 1.2e-12 76.6 82 40.2
QL03p020817 Quercus lobata HOM05D000007 ORTHO05D000039 1.2e-12 76.6 82 40.2
QL03p021893 Quercus lobata HOM05D000007 ORTHO05D000039 1.2e-12 76.6 82 40.2
QL03p021906 Quercus lobata HOM05D000007 ORTHO05D000039 1.2e-12 76.6 82 40.2
Cfa006665 Carpinus fangiana HOM05D000007 ORTHO05D000039 2.0e-12 75.9 83 39.8
Cfa000440 Carpinus fangiana HOM05D000007 ORTHO05D000039 4.4e-12 74.7 83 38.6
Cfa000500 Carpinus fangiana HOM05D000007 ORTHO05D000039 5.7e-12 74.3 84 36.9
Cfa000501 Carpinus fangiana HOM05D000007 ORTHO05D000039 5.7e-12 74.3 84 36.9
CiPaw.07G024200 Carya illinoinensis HOM05D000007 ORTHO05D000039 5.7e-12 74.3 86 33.7
CiPaw.07G024500 Carya illinoinensis HOM05D000007 ORTHO05D000039 7.5e-12 73.9 86 33.7
TWI60G0485 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 7.5e-12 73.9 82 41.5
CiPaw.07G024400 Carya illinoinensis HOM05D000007 ORTHO05D000039 9.8e-12 73.6 87 32.2
Cfa000495 Carpinus fangiana HOM05D000007 ORTHO05D000039 1.3e-11 73.2 84 38.1
CAN.G212.10 Capsicum annuum HOM05D000007 ORTHO05D000039 1.7e-11 72.8 83 37.3
Cfa000448 Carpinus fangiana HOM05D000007 ORTHO05D000039 1.7e-11 72.8 84 36.9
CiPaw.08G159300 Carya illinoinensis HOM05D000007 ORTHO05D000039 1.7e-11 72.8 82 37.8
CiPaw.08G159400 Carya illinoinensis HOM05D000007 ORTHO05D000039 1.7e-11 72.8 82 36.6
QL04p029136 Quercus lobata HOM05D000007 ORTHO05D000039 1.7e-11 72.8 82 40.2
CSS0003262 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000039 2.8e-11 72.0 83 37.3
Cfa000449 Carpinus fangiana HOM05D000007 ORTHO05D000039 2.8e-11 72.0 83 38.6
Hma1.2p1_0901F.1_g234670 Hydrangea macrophylla HOM05D000007 ORTHO05D000039 2.8e-11 72.0 88 38.6
Hma1.2p1_0901F.1_g234685 Hydrangea macrophylla HOM05D000007 ORTHO05D000039 2.8e-11 72.0 88 38.6
Hma1.2p1_1150F.1_g261840 Hydrangea macrophylla HOM05D000007 ORTHO05D000039 2.8e-11 72.0 88 38.6
Cfa000425 Carpinus fangiana HOM05D000007 ORTHO05D000039 6.3e-11 70.9 82 37.8
Haze_13258 Corylus avellana HOM05D000007 ORTHO05D000039 6.3e-11 70.9 66 43.9
Cfa000428 Carpinus fangiana HOM05D000007 ORTHO05D000039 8.3e-11 70.5 86 38.4
Cfa000444 Carpinus fangiana HOM05D000007 ORTHO05D000039 8.3e-11 70.5 87 36.8
CiPaw.14G019500 Carya illinoinensis HOM05D000007 ORTHO05D000039 8.3e-11 70.5 80 38.8
TWI59G1353 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 1.1e-10 70.1 88 38.6
Cfa000443 Carpinus fangiana HOM05D000007 ORTHO05D000039 1.4e-10 69.7 83 37.3
TWI59G0999 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 1.8e-10 69.3 85 40.0
PGSC0003DMG400007566 Solanum tuberosum HOM05D000007 ORTHO05D000039 2.4e-10 68.9 84 38.1
PGSC0003DMG400037648 Solanum tuberosum HOM05D000007 ORTHO05D000039 2.4e-10 68.9 84 38.1
QL05p044233 Quercus lobata HOM05D000007 ORTHO05D000039 3.1e-10 68.6 91 37.4
TWI74G1656 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 3.1e-10 68.6 84 36.9
Cfa000499 Carpinus fangiana HOM05D000007 ORTHO05D000039 4.1e-10 68.2 84 36.9
AUR62016381 Chenopodium quinoa HOM05D000007 ORTHO05D000039 4.1e-10 68.2 82 37.8
TWI53G1032 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 4.1e-10 68.2 87 44.8
Gohir.A10G143700 Gossypium hirsutum HOM05D000007 ORTHO05D000039 5.4e-10 67.8 82 37.8
Peaxi162Scf00070g00071 Petunia axillaris HOM05D000007 ORTHO05D000039 5.4e-10 67.8 88 34.1
AUR62011562 Chenopodium quinoa HOM05D000007 ORTHO05D000039 7.0e-10 67.4 82 37.8
Solyc07g044920.1 Solanum lycopersicum HOM05D000007 ORTHO05D000039 7.0e-10 67.4 87 37.9
TWI60G1487 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 7.0e-10 67.4 81 42.0
vmacro05999 Vaccinium macrocarpon HOM05D000007 ORTHO05D000039 7.0e-10 67.4 69 43.5
CiPaw.04G017800 Carya illinoinensis HOM05D000007 ORTHO05D000039 9.1e-10 67.0 83 36.1
Actinidia29351 Actinidia chinensis HOM05D000007 ORTHO05D000039 1.6e-09 66.2 68 44.1
QL05p044215 Quercus lobata HOM05D000007 ORTHO05D000039 1.6e-09 66.2 91 36.3
PGSC0003DMG400009446 Solanum tuberosum HOM05D000007 ORTHO05D000039 1.6e-09 66.2 84 34.5
Nitab4.5_0000211g0010 Nicotiana tabacum HOM05D000007 ORTHO05D000039 2.0e-09 65.9 90 33.3
Haze_02821 Corylus avellana HOM05D000007 ORTHO05D000039 2.7e-09 65.5 80 40.0
Dinv04466 Davidia involucrata HOM05D000007 ORTHO05D000039 2.7e-09 65.5 69 39.1
Nitab4.5_0000275g0060 Nicotiana tabacum HOM05D000007 ORTHO05D000039 2.7e-09 65.5 83 28.9
QL04p029261 Quercus lobata HOM05D000007 ORTHO05D000039 2.7e-09 65.5 91 36.3
Lj8C20T2 Lonicera japonica HOM05D000007 ORTHO05D000039 3.5e-09 65.1 90 31.1
Cfa000498 Carpinus fangiana HOM05D000007 ORTHO05D000039 4.5e-09 64.7 83 33.7
Cfa000455 Carpinus fangiana HOM05D000007 ORTHO05D000039 5.9e-09 64.3 85 36.5
QL04p029172 Quercus lobata HOM05D000007 ORTHO05D000039 5.9e-09 64.3 93 35.5
TWI53G1885 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 5.9e-09 64.3 82 36.6
Cfa000454 Carpinus fangiana HOM05D000007 ORTHO05D000039 7.7e-09 63.9 86 36.0
Peaxi162Scf00326g00043 Petunia axillaris HOM05D000007 ORTHO05D000039 7.7e-09 63.9 86 32.6
Haze_02828 Corylus avellana HOM05D000007 ORTHO05D000039 1.0e-08 63.5 78 41.0
TWI63G0287 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 1.0e-08 63.5 74 40.5
Haze_02830 Corylus avellana HOM05D000007 ORTHO05D000039 1.3e-08 63.2 78 41.0
Lj8C355T6 Lonicera japonica HOM05D000007 ORTHO05D000039 1.3e-08 63.2 82 30.5
TWI59G1185 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 1.3e-08 63.2 91 38.5
Cfa000453 Carpinus fangiana HOM05D000007 ORTHO05D000039 1.7e-08 62.8 92 35.9
Manes.04G093401 Manihot esculenta HOM05D000007 ORTHO05D000039 2.2e-08 62.4 80 37.5
Peaxi162Scf01162g00011 Petunia axillaris HOM05D000007 ORTHO05D000039 2.2e-08 62.4 89 30.3
QL02p078646 Quercus lobata HOM05D000007 ORTHO05D000039 2.2e-08 62.4 88 34.1
TWI59G0311 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 2.2e-08 62.4 88 36.4
Haze_02864 Corylus avellana HOM05D000007 ORTHO05D000039 2.9e-08 62.0 77 37.7
Peaxi162Scf00326g00062 Petunia axillaris HOM05D000007 ORTHO05D000039 2.9e-08 62.0 84 29.8
Lj8P354T16 Lonicera japonica HOM05D000007 ORTHO05D000039 3.8e-08 61.6 82 31.7
Dinv06511 Davidia involucrata HOM05D000007 ORTHO05D000039 5.0e-08 61.2 84 34.5
Dinv07686 Davidia involucrata HOM05D000007 ORTHO05D000039 5.0e-08 61.2 82 35.4
Peaxi162Scf01590g00001 Petunia axillaris HOM05D000007 ORTHO05D000039 5.0e-08 61.2 84 29.8
Peaxi162Scf75437g00003 Petunia axillaris HOM05D000007 ORTHO05D000039 5.0e-08 61.2 84 29.8
QL04p029107 Quercus lobata HOM05D000007 ORTHO05D000039 5.0e-08 61.2 79 36.7
Sc10g0006140 Simmondsia chinensis HOM05D000007 ORTHO05D000039 5.0e-08 61.2 82 34.1
TWI34G1066 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 5.0e-08 61.2 85 35.3
DCAR_007412 Daucus carota HOM05D000007 ORTHO05D000039 6.5e-08 60.8 82 34.1
Dinv34988 Davidia involucrata HOM05D000007 ORTHO05D000039 6.5e-08 60.8 84 34.5
Gohir.A12G083765 Gossypium hirsutum HOM05D000007 ORTHO05D000039 8.5e-08 60.5 82 31.7
Gohir.D12G088200 Gossypium hirsutum HOM05D000007 ORTHO05D000039 8.5e-08 60.5 82 31.7
Gorai.008G098100 Gossypium raimondii HOM05D000007 ORTHO05D000039 8.5e-08 60.5 82 31.7
PGSC0003DMG400016927 Solanum tuberosum HOM05D000007 ORTHO05D000039 8.5e-08 60.5 86 27.9
Medtr5g022850 Medicago truncatula HOM05D000007 ORTHO05D000039 1.1e-07 60.1 82 39.0
Nitab4.5_0000217g0110 Nicotiana tabacum HOM05D000007 ORTHO05D000039 1.1e-07 60.1 91 31.9
TWI60G0843 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 1.1e-07 60.1 81 33.3
Duzib114G0469 Durio zibethinus HOM05D000007 ORTHO05D000039 1.5e-07 59.7 84 39.3
Duzib114G0947 Durio zibethinus HOM05D000007 ORTHO05D000039 1.5e-07 59.7 84 38.1
Duzib187G1873 Durio zibethinus HOM05D000007 ORTHO05D000039 1.5e-07 59.7 82 30.5
Peaxi162Scf00336g00062 Petunia axillaris HOM05D000007 ORTHO05D000039 1.5e-07 59.7 88 29.5
PGSC0003DMG400029040 Solanum tuberosum HOM05D000007 ORTHO05D000039 1.5e-07 59.7 84 32.1
Dinv19778 Davidia involucrata HOM05D000007 ORTHO05D000039 1.9e-07 59.3 80 38.8
Gorai.011G135900 Gossypium raimondii HOM05D000007 ORTHO05D000039 1.9e-07 59.3 82 34.1
Lj4A129G111 Lonicera japonica HOM05D000007 ORTHO05D000039 1.9e-07 59.3 92 33.7
Medtr0129s0070 Medicago truncatula HOM05D000007 ORTHO05D000039 1.9e-07 59.3 81 34.6
TWI14G1098 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 1.9e-07 59.3 80 37.5
TWI59G0519 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 1.9e-07 59.3 88 35.2
vmacro23298 Vaccinium macrocarpon HOM05D000007 ORTHO05D000039 1.9e-07 59.3 86 30.2
Haze_27606 Corylus avellana HOM05D000007 ORTHO05D000039 2.5e-07 58.9 73 41.1
Dinv34982 Davidia involucrata HOM05D000007 ORTHO05D000039 2.5e-07 58.9 84 33.3
Lj4P129T109 Lonicera japonica HOM05D000007 ORTHO05D000039 2.5e-07 58.9 92 32.6
Thecc.04G089800 Theobroma cacao HOM05D000007 ORTHO05D000039 2.5e-07 58.9 82 31.7
Dinv07011 Davidia involucrata HOM05D000007 ORTHO05D000039 3.2e-07 58.5 90 33.3
Migut.M00112 Erythranthe guttata HOM05D000007 ORTHO05D000039 3.2e-07 58.5 88 29.5
Lj1g0005691 Lotus japonicus HOM05D000007 ORTHO05D000039 3.2e-07 58.5 67 34.3
Medtr8g018110 Medicago truncatula HOM05D000007 ORTHO05D000039 3.2e-07 58.5 83 31.3
Hma1.2p1_3211F.1_g333990 Hydrangea macrophylla HOM05D000007 ORTHO05D000039 4.2e-07 58.2 92 29.3
Medtr8g033090 Medicago truncatula HOM05D000007 ORTHO05D000039 4.2e-07 58.2 83 30.1
Nitab4.5_0000910g0010 Nicotiana tabacum HOM05D000007 ORTHO05D000039 4.2e-07 58.2 86 27.9
COL.COLO4_12256 Corchorus olitorius HOM05D000007 ORTHO05D000039 5.5e-07 57.8 82 30.5
QL04p029093 Quercus lobata HOM05D000007 ORTHO05D000039 5.5e-07 57.8 68 38.2
Gohir.A05G369700 Gossypium hirsutum HOM05D000007 ORTHO05D000039 7.2e-07 57.4 82 30.5
Nitab4.5_0000253g0010 Nicotiana tabacum HOM05D000007 ORTHO05D000039 7.2e-07 57.4 81 29.6
SGA_v2.0_scaffold108G30901 Striga asiatica HOM05D005116 ORTHO05D005937 7.2e-07 57.4 76 35.5
Thecc.09G278300 Theobroma cacao HOM05D000007 ORTHO05D000039 7.2e-07 57.4 81 32.1
COL.COLO4_11672 Corchorus olitorius HOM05D000007 ORTHO05D000039 9.4e-07 57.0 87 41.4
Dinv34983 Davidia involucrata HOM05D000007 ORTHO05D000039 9.4e-07 57.0 84 33.3
Duzib150G0476 Durio zibethinus HOM05D000007 ORTHO05D000039 9.4e-07 57.0 82 31.7
Medtr4g014370 Medicago truncatula HOM05D000007 ORTHO05D000039 9.4e-07 57.0 84 33.3
Peaxi162Scf00671g00052 Petunia axillaris HOM05D000007 ORTHO05D000039 9.4e-07 57.0 89 27.0
PGSC0003DMG400006511 Solanum tuberosum HOM05D000007 ORTHO05D000039 9.4e-07 57.0 83 27.7
PGSC0003DMG400008762 Solanum tuberosum HOM05D000007 ORTHO05D000039 9.4e-07 57.0 86 30.2
MSTRG.14886 Avicennia marina HOM05D000007 ORTHO05D000039 1.2e-06 56.6 83 31.3
Dinv06198 Davidia involucrata HOM05D000007 ORTHO05D000039 1.2e-06 56.6 82 36.6
Duzib147G0121 Durio zibethinus HOM05D000007 ORTHO05D000039 1.2e-06 56.6 92 30.4
Gohir.D10G123400 Gossypium hirsutum HOM05D000007 ORTHO05D000039 1.2e-06 56.6 82 32.9
QL02p081705 Quercus lobata HOM05D000007 ORTHO05D000039 1.2e-06 56.6 90 33.3
Cfa007562 Carpinus fangiana HOM05D000007 ORTHO05D000039 1.6e-06 56.2 83 38.6
Dinv01035 Davidia involucrata HOM05D000007 ORTHO05D000039 1.6e-06 56.2 82 35.4
Lj1P652T23 Lonicera japonica HOM05D000007 ORTHO05D000039 1.6e-06 56.2 83 33.7
Peaxi162Scf01310g00032 Petunia axillaris HOM05D000007 ORTHO05D000039 1.6e-06 56.2 86 29.1
Solyc10g008580.1 Solanum lycopersicum HOM05D000007 ORTHO05D000039 1.6e-06 56.2 81 35.8
Sopen10g004400 Solanum pennellii HOM05D000007 ORTHO05D000039 1.6e-06 56.2 81 35.8
PGSC0003DMG400006514 Solanum tuberosum HOM05D000007 ORTHO05D000039 1.6e-06 56.2 89 25.8
TPR.G9066 Trifolium pratense HOM05D000007 ORTHO05D000039 1.6e-06 56.2 83 31.3
Haze_14521 Corylus avellana HOM05D000007 ORTHO05D000039 2.1e-06 55.8 82 40.2
Dinv07009 Davidia involucrata HOM05D000007 ORTHO05D000039 2.1e-06 55.8 71 36.6
Sopen01g020140 Solanum pennellii HOM05D000007 ORTHO05D000039 2.1e-06 55.8 90 30.0
Lj1g0024650 Lotus japonicus HOM05D000007 ORTHO05D000039 2.7e-06 55.5 77 31.2
Lj5g0012753 Lotus japonicus HOM05D000007 ORTHO05D000039 2.7e-06 55.5 87 29.9
Peaxi162Scf03085g00002 Petunia axillaris HOM05D000007 ORTHO05D000039 2.7e-06 55.5 90 27.8
TWI73G0529 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 2.7e-06 55.5 68 41.2
Cfa007563 Carpinus fangiana HOM05D000513 ORTHO05D005338 3.6e-06 55.1 83 37.3
Duzib187G1357 Durio zibethinus HOM05D000007 ORTHO05D000039 3.6e-06 55.1 82 32.9
Lj8P355T18 Lonicera japonica HOM05D000007 ORTHO05D000039 3.6e-06 55.1 76 28.9
Lalb_Chr10g0092101 Lupinus albus HOM05D000007 ORTHO05D000039 3.6e-06 55.1 81 37.0
Psat3g173680 Pisum sativum HOM05D000007 ORTHO05D000039 3.6e-06 55.1 83 32.5
TWI81G0699 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 3.6e-06 55.1 80 35.0
arahy.Tifrunner.gnm1.ann1.L34NFV Arachis hypogaea HOM05D000007 ORTHO05D000039 4.7e-06 54.7 81 30.9
Duzib147G1278 Durio zibethinus HOM05D000007 ORTHO05D000039 4.7e-06 54.7 83 31.3
Peaxi162Scf00326g00052 Petunia axillaris HOM05D000007 ORTHO05D000039 4.7e-06 54.7 90 26.7
QL04p029140 Quercus lobata HOM05D000007 ORTHO05D000039 4.7e-06 54.7 86 37.2
MSTRG.6523 Avicennia marina HOM05D000007 ORTHO05D000039 6.1e-06 54.3 92 33.7
MD17G1023400 Malus domestica HOM05D000007 ORTHO05D000039 6.1e-06 54.3 91 29.7
Medtr2g021770 Medicago truncatula HOM05D000007 ORTHO05D000039 6.1e-06 54.3 86 34.9
PGSC0003DMG400026599 Solanum tuberosum HOM05D000007 ORTHO05D000039 6.1e-06 54.3 90 26.7
Dinv06537 Davidia involucrata HOM05D000007 ORTHO05D000039 8.0e-06 53.9 81 32.1
Psat6g036320 Pisum sativum HOM05D000007 ORTHO05D000039 8.0e-06 53.9 92 32.6


User provided reference genes

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