Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc44.7 Carica papaya HOM05D004442 ORTHO05D002066 4.4e-121 438.0 220 100.0
Atru.chr4.1928 Acer truncatum HOM05D004442 ORTHO05D002066 7.2e-47 191.4 221 46.6
Ciclev10004536m.g Citrus clementina HOM05D004442 ORTHO05D002066 2.7e-46 189.5 221 48.0
Thecc.04G263200 Theobroma cacao HOM05D004442 ORTHO05D002066 6.1e-46 188.3 221 45.7
QL06p020863 Quercus lobata HOM05D004442 ORTHO05D002066 9.7e-44 181.0 222 44.1
Duzib151G0797 Durio zibethinus HOM05D004442 ORTHO05D002066 6.3e-43 178.3 222 45.5
GSVIVG01027909001 Vitis vinifera HOM05D004442 ORTHO05D002066 2.4e-42 176.4 222 43.2
Haze_11452 Corylus avellana HOM05D004442 ORTHO05D002066 5.3e-42 175.3 224 43.8
CiPaw.01G178800 Carya illinoinensis HOM05D004442 ORTHO05D002066 2.5e-39 166.4 223 44.4
Gorai.006G251400 Gossypium raimondii HOM05D004442 ORTHO05D002066 1.8e-37 160.2 210 44.8
Gohir.A09G227700 Gossypium hirsutum HOM05D004442 ORTHO05D002066 2.3e-37 159.8 209 44.5
Potri.010G066200 Populus trichocarpa HOM05D004442 ORTHO05D002066 5.2e-37 158.7 222 42.8
Potri.008G171400 Populus trichocarpa HOM05D004442 ORTHO05D002066 6.8e-37 158.3 222 42.8
FvH4_4g04490 Fragaria vesca HOM05D004442 ORTHO05D002066 8.8e-37 157.9 222 40.1
FAN12G2073 Fragaria x ananassa HOM05D004442 ORTHO05D002066 8.8e-37 157.9 222 40.1
Manes.03G159700 Manihot esculenta HOM05D004442 ORTHO05D002066 2.0e-36 156.8 219 43.4
Gohir.D09G228700 Gossypium hirsutum HOM05D004442 ORTHO05D002066 3.4e-36 156.0 210 43.8
Duzib212G0888 Durio zibethinus HOM05D004442 ORTHO05D002066 5.7e-36 155.2 188 45.2
Dinv27108 Davidia involucrata HOM05D004442 ORTHO05D002066 2.2e-35 153.3 223 40.8
TWI73G0593 Tripterygium wilfordii HOM05D004442 ORTHO05D002066 2.2e-35 153.3 222 40.1
TWI09G0742 Tripterygium wilfordii HOM05D004442 ORTHO05D002066 4.8e-35 152.1 222 40.5
RcHm_v2.0_Chr4g0395271 Rosa chinensis HOM05D004442 ORTHO05D002066 2.4e-34 149.8 210 40.0
Sed0022318 Sechium edule HOM05D004442 ORTHO05D002066 4.1e-34 149.1 227 38.3
Sabra10G0041000 Salix brachista HOM05D004442 ORTHO05D002066 7.0e-34 148.3 222 40.5
Prupe.1G047300 Prunus persica HOM05D004442 ORTHO05D002066 9.1e-34 147.9 222 37.4
Actinidia20837 Actinidia chinensis HOM05D004442 ORTHO05D002066 3.5e-33 146.0 216 38.0
Gohir.A10G109132 Gossypium hirsutum HOM05D004442 ORTHO05D002066 3.5e-33 146.0 208 38.0
MD13G1220400 Malus domestica HOM05D004442 ORTHO05D002066 5.9e-33 145.2 218 37.2
Sabra08G0130900 Salix brachista HOM05D004442 ORTHO05D002066 5.9e-33 145.2 222 40.1
CSS0038922 Camellia sinensis var. sinensis HOM05D004442 ORTHO05D002066 1.0e-32 144.4 221 38.0
Gohir.A02G042500 Gossypium hirsutum HOM05D004442 ORTHO05D002066 1.3e-32 144.1 219 39.7
Gorai.005G053400 Gossypium raimondii HOM05D004442 ORTHO05D002066 1.3e-32 144.1 219 38.8
Dinv29808 Davidia involucrata HOM05D004442 ORTHO05D002066 1.7e-32 143.7 221 38.9
MD16G1225600 Malus domestica HOM05D004442 ORTHO05D002066 5.0e-32 142.1 221 36.7
Gohir.D02G048100 Gossypium hirsutum HOM05D004442 ORTHO05D002066 6.5e-32 141.7 219 38.8
CiPaw.02G107600 Carya illinoinensis HOM05D004442 ORTHO05D002066 3.2e-31 139.4 222 38.7
TAR636G2240 Trochodendron aralioides HOM05D004442 ORTHO05D002066 1.0e-29 134.4 226 36.3
CANSAT78G2027 Cannabis sativa HOM05D004442 ORTHO05D002066 1.5e-28 130.6 222 39.2
Actinidia35814 Actinidia chinensis HOM05D004442 ORTHO05D002066 3.4e-28 129.4 216 36.6
Gorai.011G178400 Gossypium raimondii HOM05D004442 ORTHO05D002066 2.8e-27 126.3 221 36.2
arahy.Tifrunner.gnm1.ann1.F19H1J Arachis hypogaea HOM05D004442 ORTHO05D002066 6.3e-27 125.2 222 36.9
Glyma.20G200700 Glycine max HOM05D004442 ORTHO05D002066 8.3e-27 124.8 222 34.7
arahy.Tifrunner.gnm1.ann1.RX399P Arachis hypogaea HOM05D004442 ORTHO05D002066 3.1e-26 122.9 222 36.0
Glyma.10G190100 Glycine max HOM05D004442 ORTHO05D002066 1.6e-25 120.6 222 34.7
Gohir.D10G158800 Gossypium hirsutum HOM05D004442 ORTHO05D002066 2.7e-25 119.8 208 35.1
vmacro08550 Vaccinium macrocarpon HOM05D004442 ORTHO05D002066 7.8e-25 118.2 221 39.4
TPR.G28847 Trifolium pratense HOM05D004442 ORTHO05D002066 1.0e-24 117.9 177 39.5
Eucgr.H00133 Eucalyptus grandis HOM05D004442 ORTHO05D002066 3.8e-24 115.9 197 35.5
Lj5g0002072 Lotus japonicus HOM05D004442 ORTHO05D002066 3.8e-24 115.9 222 36.9
Ca_09804_v3 Cicer arietinum L. HOM05D004442 ORTHO05D002066 6.6e-24 115.2 156 41.0
Ca_30485_v3 Cicer arietinum L. HOM05D004442 ORTHO05D002066 6.6e-24 115.2 156 41.0
Lalb_Chr02g0150661 Lupinus albus HOM05D004442 ORTHO05D002066 1.9e-23 113.6 177 37.9
Lalb_Chr21g0312491 Lupinus albus HOM05D004442 ORTHO05D002066 3.3e-23 112.8 222 35.6
PGR004G1547 Punica granatum HOM05D004442 ORTHO05D002066 1.6e-22 110.5 174 39.7
TAR362G0471 Trochodendron aralioides HOM05D004442 ORTHO05D001474 2.8e-22 109.8 235 35.3
Medtr1g073360 Medicago truncatula HOM05D004442 ORTHO05D002066 4.7e-22 109.0 177 38.4
Lalb_Chr06g0169491 Lupinus albus HOM05D004442 ORTHO05D002066 6.1e-22 108.6 213 32.9
ClCG05G004050 Citrullus lanatus HOM05D004442 ORTHO05D002066 1.0e-21 107.8 223 32.7
Hund03083 Selenicereus undatus HOM05D004442 ORTHO05D002066 5.2e-21 105.5 222 31.1
Nitab4.5_0002751g0020 Nicotiana tabacum HOM05D004442 ORTHO05D002066 6.8e-21 105.1 150 36.0
Psat6g131720 Pisum sativum HOM05D004442 ORTHO05D002066 1.2e-20 104.4 193 36.3
Nitab4.5_0000194g0290 Nicotiana tabacum HOM05D004442 ORTHO05D002066 2.6e-20 103.2 150 35.3
Carub.0004s1498 Capsella rubella HOM05D004442 ORTHO05D002066 3.4e-20 102.8 158 39.9
Hma1.2p1_0112F.1_g054670 Hydrangea macrophylla HOM05D004442 ORTHO05D002066 4.4e-20 102.4 217 32.3
CsaV3_3G011760 Cucumis sativus L. HOM05D004442 ORTHO05D002066 5.7e-20 102.1 219 32.0
Cc03_g06240 Coffea canephora HOM05D004442 ORTHO05D002066 7.5e-20 101.7 139 41.7
Hund27520 Selenicereus undatus HOM05D004442 ORTHO05D002066 7.5e-20 101.7 170 35.3
Hund27527 Selenicereus undatus HOM05D004442 ORTHO05D002066 7.5e-20 101.7 170 35.3
Rhsim04G0172800 Rhododendron simsii HOM05D004442 ORTHO05D002066 2.9e-19 99.8 220 34.5
Sc25g0003560 Simmondsia chinensis HOM05D004442 ORTHO05D002066 3.7e-19 99.4 195 33.3
VMungo0720G2631 Vigna mungo HOM05D004442 ORTHO05D002066 3.7e-19 99.4 177 35.6
CAN.G220.77 Capsicum annuum HOM05D004442 ORTHO05D002066 4.9e-19 99.0 219 30.1
Thhalv10016411m.g Eutrema salsugineum HOM05D004442 ORTHO05D002066 4.9e-19 99.0 104 50.0
Sp4g15670 Schrenkiella parvula HOM05D004442 ORTHO05D002066 1.1e-18 97.8 159 40.9
Peaxi162Scf00033g03018 Petunia axillaris HOM05D004442 ORTHO05D002066 1.4e-18 97.4 213 30.0
MELO3C006382.2 Cucumis melo HOM05D004442 ORTHO05D002066 2.4e-18 96.7 223 30.9
Sc19g0003330 Simmondsia chinensis HOM05D004442 ORTHO05D002066 2.4e-18 96.7 215 34.9
MSTRG.24663 Avicennia marina HOM05D004442 ORTHO05D002066 4.1e-18 95.9 227 33.5
Aa31LG5G3950 Aethionema arabicum HOM05D004442 ORTHO05D002066 7.0e-18 95.1 108 48.1
AT2G33360 Arabidopsis thaliana HOM05D004442 ORTHO05D002066 7.0e-18 95.1 144 40.3
Nn1g02949 Nelumbo nucifera HOM05D004442 ORTHO05D002066 7.0e-18 95.1 225 31.1
Phvul.L002144 Phaseolus vulgaris HOM05D004442 ORTHO05D002066 7.0e-18 95.1 222 32.0
AL4G29010 Arabidopsis lyrata HOM05D004442 ORTHO05D002066 2.0e-17 93.6 179 37.4
EL10Ac3g04949 Beta vulgaris HOM05D004442 ORTHO05D002066 2.0e-17 93.6 222 31.1
PGSC0003DMG400017149 Solanum tuberosum HOM05D004442 ORTHO05D002066 2.7e-17 93.2 214 29.0
CARHR127360 Cardamine hirsuta HOM05D004442 ORTHO05D002066 3.5e-17 92.8 215 36.3
Glyma.20G085300 Glycine max HOM05D004442 ORTHO05D002066 1.1e-15 87.8 141 36.2
THA.LOC104801070 Tarenaya hassleriana HOM05D004442 ORTHO05D002066 3.3e-15 86.3 217 35.0
Ah.04g155310 Amaranthus hybridus HOM05D004442 ORTHO05D002066 7.3e-15 85.1 174 30.5
Sopen09g033580 Solanum pennellii HOM05D004442 ORTHO05D002066 9.5e-15 84.7 214 28.0
MSTRG.9863 Avicennia marina HOM05D004442 ORTHO05D002066 1.2e-14 84.3 177 33.9
Solyc09g090640.3 Solanum lycopersicum HOM05D004442 ORTHO05D002066 1.2e-14 84.3 214 28.0
BcaB02g10554 Brassica carinata HOM05D004442 ORTHO05D002066 1.6e-14 84.0 153 39.9
BcaC01g05846 Brassica carinata HOM05D004442 ORTHO05D002066 1.6e-14 84.0 105 46.7
BolC3t14566H Brassica oleracea HOM05D004442 ORTHO05D002066 1.6e-14 84.0 105 46.7
C03p21840 Brassica napus HOM05D004442 ORTHO05D002066 2.1e-14 83.6 105 46.7
Aqoxy5G00152 Aquilegia oxysepala HOM05D004442 ORTHO05D002066 5.2e-13 79.0 231 31.6
A05p12160 Brassica napus HOM05D004442 ORTHO05D002066 5.2e-13 79.0 130 40.8
FAN22G0410 Fragaria x ananassa HOM05D004442 ORTHO05D002066 5.2e-13 79.0 100 43.0
Oeu043422.1 Olea europaea HOM05D004442 ORTHO05D002066 6.8e-13 78.6 220 30.9
A03p18690 Brassica napus HOM05D004442 ORTHO05D002066 8.9e-13 78.2 105 42.9
BraA03t11129Z Brassica rapa HOM05D004442 ORTHO05D002066 1.2e-12 77.8 105 42.9
BraA05t20160Z Brassica rapa HOM05D004442 ORTHO05D002066 1.2e-12 77.8 130 40.0
BcaC02g11422 Brassica carinata HOM05D004442 ORTHO05D002066 2.6e-12 76.6 130 40.8
C04p15730 Brassica napus HOM05D004442 ORTHO05D002066 2.6e-12 76.6 130 40.8
BolC4t23141H Brassica oleracea HOM05D004442 ORTHO05D002066 2.6e-12 76.6 130 40.8
PSO764G0053 Papaver somniferum HOM05D004442 ORTHO05D002066 9.8e-12 74.7 200 27.5
FAN17G1190 Fragaria x ananassa HOM05D004442 ORTHO05D002066 1.7e-11 73.9 100 41.0
SalBow3G0550 Salvia bowleyana HOM05D004442 ORTHO05D002066 1.7e-11 73.9 170 31.8
Oeu002937.1 Olea europaea HOM05D004442 ORTHO05D002066 8.3e-11 71.6 198 26.8
SGA_v2.0_scaffold31G12640 Striga asiatica HOM05D004442 ORTHO05D002066 8.3e-11 71.6 222 31.1
Lsat_1_v5_gn_6_68581 Lactuca sativa HOM05D004442 ORTHO05D002066 1.1e-10 71.2 129 36.4
Glyma.10G134500 Glycine max HOM05D004442 ORTHO05D002066 2.4e-10 70.1 139 33.1
THA.LOC104826092 Tarenaya hassleriana HOM05D004442 ORTHO05D002066 2.4e-10 70.1 164 34.8
Eucgr.H02958 Eucalyptus grandis HOM05D004442 ORTHO05D002066 9.2e-10 68.2 219 27.9
Oeu059398.1 Olea europaea HOM05D004442 ORTHO05D002066 9.2e-10 68.2 170 30.6
HanXRQChr02g0059311 Helianthus annuus HOM05D004442 ORTHO05D002066 1.0e-08 64.7 162 30.9
Phvul.007G270700 Phaseolus vulgaris HOM05D004442 ORTHO05D002066 2.3e-08 63.5 146 30.8
MSTRG.4167 Avicennia marina HOM05D004442 ORTHO05D002066 6.6e-08 62.0 88 37.5
VMungo0720G2722 Vigna mungo HOM05D004442 ORTHO05D002066 3.3e-07 59.7 144 31.9
Nn1g07134 Nelumbo nucifera HOM05D004442 ORTHO05D002066 2.8e-06 56.6 80 38.8
Lj6E622T1 Lonicera japonica HOM05D004442 ORTHO05D002066 3.6e-06 56.2 104 32.7
Migut.G00544 Erythranthe guttata HOM05D004442 ORTHO05D002066 8.1e-06 55.1 112 33.0


User provided reference genes

Program Settings