Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc44.32 Carica papaya HOM05D005408 ORTHO05D006790 0.0e+00 1797.3 927 100.0
Thecc.04G259100 Theobroma cacao HOM05D005408 ORTHO05D006790 8.5e-299 1030.4 951 62.4
Potri.010G069200 Populus trichocarpa HOM05D005408 ORTHO05D006790 4.2e-290 1001.5 954 60.2
Dinv27073 Davidia involucrata HOM05D005408 ORTHO05D006790 2.7e-289 998.8 999 57.9
Duzib151G0888 Durio zibethinus HOM05D005408 ORTHO05D006790 3.3e-287 991.9 966 58.8
TWI09G0385 Tripterygium wilfordii HOM05D005408 ORTHO05D006790 4.4e-287 991.5 970 58.0
GSVIVG01027854001 Vitis vinifera HOM05D005408 ORTHO05D006790 3.1e-285 985.3 950 58.2
Dinv29839 Davidia involucrata HOM05D005408 ORTHO05D006790 7.7e-284 980.7 953 58.4
Haze_11418 Corylus avellana HOM05D005408 ORTHO05D006790 8.5e-283 977.2 970 58.9
Duzib212G0761 Durio zibethinus HOM05D005408 ORTHO05D006790 8.5e-283 977.2 953 58.8
TWI53G1583 Tripterygium wilfordii HOM05D005408 ORTHO05D006790 8.5e-283 977.2 970 57.2
Cfa014743 Carpinus fangiana HOM05D005408 ORTHO05D006790 1.5e-282 976.5 972 58.6
Ciclev10004264m.g Citrus clementina HOM05D005408 ORTHO05D006790 4.2e-282 974.9 945 58.7
QL06p019224 Quercus lobata HOM05D005408 ORTHO05D006790 8.8e-280 967.2 947 59.6
Potri.008G169200 Populus trichocarpa HOM05D005408 ORTHO05D006790 2.6e-279 965.7 953 59.7
Prupe.1G042300 Prunus persica HOM05D005408 ORTHO05D006790 7.5e-279 964.1 998 57.1
Sabra10G0037900 Salix brachista HOM05D005408 ORTHO05D006790 7.5e-279 964.1 951 59.0
COL.COLO4_15917 Corchorus olitorius HOM05D005408 ORTHO05D006790 2.0e-276 956.1 958 58.6
Gohir.A02G040500 Gossypium hirsutum HOM05D005408 ORTHO05D006790 4.2e-274 948.3 952 58.3
CiPaw.02G109300 Carya illinoinensis HOM05D005408 ORTHO05D006790 2.7e-273 945.7 960 58.6
Atru.chr4.2004 Acer truncatum HOM05D005408 ORTHO05D006790 8.0e-273 944.1 949 58.1
CSS0047984 Camellia sinensis var. sinensis HOM05D005408 ORTHO05D006790 2.3e-272 942.6 986 55.2
Aa31LG9G3050 Aethionema arabicum HOM05D005408 ORTHO05D006790 4.0e-272 941.8 950 55.7
TAR633G1608 Trochodendron aralioides HOM05D005408 ORTHO05D006790 6.8e-272 941.0 1013 53.9
Sabra08G0129000 Salix brachista HOM05D005408 ORTHO05D006790 8.8e-272 940.6 965 57.1
Gohir.D02G046500 Gossypium hirsutum HOM05D005408 ORTHO05D006790 4.4e-271 938.3 954 57.7
Sp7g12340 Schrenkiella parvula HOM05D005408 ORTHO05D006790 6.3e-270 934.5 952 55.7
Carub.0007s2798 Capsella rubella HOM05D005408 ORTHO05D006790 1.4e-269 933.3 949 55.6
Manes.15G043200 Manihot esculenta HOM05D005408 ORTHO05D006790 1.4e-269 933.3 954 55.8
THA.LOC104804761 Tarenaya hassleriana HOM05D005408 ORTHO05D006790 1.8e-269 932.9 947 57.2
AT4G14310 Arabidopsis thaliana HOM05D005408 ORTHO05D006790 2.4e-269 932.6 950 55.4
CARHR220500 Cardamine hirsuta HOM05D005408 ORTHO05D006790 3.1e-269 932.2 960 55.7
Actinidia20821 Actinidia chinensis HOM05D005408 ORTHO05D006790 1.2e-268 930.2 992 55.6
MD16G1222000 Malus domestica HOM05D005408 ORTHO05D006790 1.0e-267 927.2 978 55.9
Manes.15G043300 Manihot esculenta HOM05D005408 ORTHO05D006790 3.3e-266 922.2 946 56.1
MD13G1216600 Malus domestica HOM05D005408 ORTHO05D006790 1.6e-265 919.8 987 55.3
RcHm_v2.0_Chr4g0394291 Rosa chinensis HOM05D005408 ORTHO05D006790 1.4e-264 916.8 969 55.6
ClCG05G004200 Citrullus lanatus HOM05D005408 ORTHO05D006790 1.2e-263 913.7 988 54.6
CSS0016984 Camellia sinensis var. sinensis HOM05D005408 ORTHO05D006790 1.7e-262 909.8 986 54.4
FAN12G0827 Fragaria x ananassa HOM05D005408 ORTHO05D006790 3.7e-262 908.7 952 55.8
Gorai.005G051300 Gossypium raimondii HOM05D005408 ORTHO05D006790 3.7e-262 908.7 898 58.9
AL7G41950 Arabidopsis lyrata HOM05D005408 ORTHO05D006790 6.4e-262 907.9 951 54.6
THA.LOC104822240 Tarenaya hassleriana HOM05D005408 ORTHO05D006790 1.1e-261 907.1 953 55.3
FvH4_4g04020 Fragaria vesca HOM05D005408 ORTHO05D006790 1.6e-260 903.3 950 55.5
DCAR_024278 Daucus carota HOM05D005408 ORTHO05D006790 5.9e-260 901.4 957 53.8
MELO3C006406.2 Cucumis melo HOM05D005408 ORTHO05D006790 7.8e-260 901.0 981 52.7
CsaV3_3G011930 Cucumis sativus L. HOM05D005408 ORTHO05D006790 1.0e-259 900.6 985 53.8
FAN17G2537 Fragaria x ananassa HOM05D005408 ORTHO05D006790 5.6e-258 894.8 953 55.1
CANSAT54G2691 Cannabis sativa HOM05D005408 ORTHO05D006790 4.0e-256 888.6 976 54.9
CiPaw.01G181400 Carya illinoinensis HOM05D005408 ORTHO05D006790 3.4e-255 885.6 963 55.0
TAR362G0279 Trochodendron aralioides HOM05D005408 ORTHO05D006790 3.5e-252 875.5 995 52.6
Thhalv10024359m.g Eutrema salsugineum HOM05D005408 ORTHO05D006790 1.7e-251 873.2 952 53.3
FAN22G0039 Fragaria x ananassa HOM05D005408 ORTHO05D006790 8.1e-249 864.4 995 52.8
Lj3A679T38 Lonicera japonica HOM05D005408 ORTHO05D006790 8.9e-248 860.9 1005 52.6
Lj3A684T25 Lonicera japonica HOM05D005408 ORTHO05D006790 1.5e-247 860.1 1005 52.6
EL10Ac3g04981 Beta vulgaris HOM05D005408 ORTHO05D006790 2.6e-247 859.4 954 53.6
BcaNung06103 Brassica carinata HOM05D005408 ORTHO05D006790 2.6e-247 859.4 952 53.0
C03p76860 Brassica napus HOM05D005408 ORTHO05D006790 2.6e-247 859.4 951 52.9
Sopen09g033240 Solanum pennellii HOM05D005408 ORTHO05D006790 5.8e-247 858.2 1002 51.9
Solyc09g090340.3 Solanum lycopersicum HOM05D005408 ORTHO05D006790 1.3e-246 857.1 994 51.6
Eucgr.H03018 Eucalyptus grandis HOM05D005408 ORTHO05D006790 2.2e-246 856.3 959 53.8
Rhsim02G0041600 Rhododendron simsii HOM05D005408 ORTHO05D006790 2.9e-246 855.9 739 62.1
Peaxi162Scf00392g00730 Petunia axillaris HOM05D005408 ORTHO05D006790 6.4e-246 854.7 990 51.9
BcaC01g00205 Brassica carinata HOM05D005408 ORTHO05D006790 4.1e-245 852.0 951 53.0
PGSC0003DMG400017212 Solanum tuberosum HOM05D005408 ORTHO05D006790 7.1e-245 851.3 1000 51.0
A08p24350 Brassica napus HOM05D005408 ORTHO05D006790 1.6e-244 850.1 949 52.8
Hma1.2p1_0112F.1_g054305 Hydrangea macrophylla HOM05D005408 ORTHO05D006790 1.1e-242 844.0 719 62.3
BolC3t19941H Brassica oleracea HOM05D005408 ORTHO05D006790 5.6e-242 841.6 970 52.0
Nn1g02867 Nelumbo nucifera HOM05D005408 ORTHO05D006790 9.5e-242 840.9 1049 50.0
Sc19g0003230 Simmondsia chinensis HOM05D005408 ORTHO05D006790 1.6e-241 840.1 966 52.7
Sed0026902 Sechium edule HOM05D005408 ORTHO05D006790 8.1e-241 837.8 949 52.2
Oeu002940.1 Olea europaea HOM05D005408 ORTHO05D006790 1.4e-240 837.0 952 53.3
CAN.G220.39 Capsicum annuum HOM05D005408 ORTHO05D006790 5.2e-240 835.1 1017 49.7
vmacro15459 Vaccinium macrocarpon HOM05D005408 ORTHO05D006790 1.2e-239 833.9 1109 48.8
BraA08t34390Z Brassica rapa HOM05D005408 ORTHO05D006790 9.9e-239 830.9 975 50.9
MBI07_g31083_MAGBIO Magnolia biondii HOM05D005408 ORTHO05D006790 4.1e-237 825.5 991 51.6
PGR004G2334 Punica granatum HOM05D005408 ORTHO05D006790 3.5e-236 822.4 956 51.0
Cc03_g05790 Coffea canephora HOM05D005408 ORTHO05D006790 1.3e-235 820.5 997 50.7
AUR62015544 Chenopodium quinoa HOM05D005408 ORTHO05D006790 3.0e-235 819.3 968 52.5
Nitab4.5_0000596g0060 Nicotiana tabacum HOM05D005408 ORTHO05D006790 1.2e-233 813.9 1073 47.3
Lalb_Chr03g0037341 Lupinus albus HOM05D005408 ORTHO05D006790 2.0e-231 806.6 956 51.6
SalBow3G0714 Salvia bowleyana HOM05D005408 ORTHO05D006790 1.4e-229 800.4 982 49.6
Nitab4.5_0000044g0530 Nicotiana tabacum HOM05D005408 ORTHO05D006790 2.4e-229 799.7 1014 49.0
Hund03055 Selenicereus undatus HOM05D005408 ORTHO05D006790 1.2e-228 797.3 987 49.0
AUR62002164 Chenopodium quinoa HOM05D005408 ORTHO05D006790 4.6e-228 795.4 946 52.3
MSTRG.21921 Avicennia marina HOM05D005408 ORTHO05D006790 1.6e-225 786.9 992 48.1
Migut.N00286 Erythranthe guttata HOM05D005408 ORTHO05D006790 2.8e-225 786.2 970 48.8
PSO832G1937 Papaver somniferum HOM05D005408 ORTHO05D006790 4.0e-224 782.3 989 47.5
Aqoxy5G00183 Aquilegia oxysepala HOM05D005408 ORTHO05D006790 6.9e-224 781.6 1021 47.7
PSO210G0343 Papaver somniferum HOM05D005408 ORTHO05D006790 4.2e-221 772.3 994 47.6
Oeu005084.1 Olea europaea HOM05D005408 ORTHO05D006790 5.4e-221 771.9 949 49.3
arahy.Tifrunner.gnm1.ann1.HQEG75 Arachis hypogaea HOM05D005408 ORTHO05D006790 1.1e-216 757.7 965 48.1
arahy.Tifrunner.gnm1.ann1.NA4LRU Arachis hypogaea HOM05D005408 ORTHO05D006790 3.1e-216 756.1 961 48.1
HanXRQChr11g0330791 Helianthus annuus HOM05D005408 ORTHO05D006790 4.0e-216 755.7 989 46.8
Lj6g0021221 Lotus japonicus HOM05D005408 ORTHO05D006790 6.9e-216 755.0 763 56.0
ECA248G0134 Erigeron canadensis HOM05D005408 ORTHO05D006790 1.3e-209 734.2 932 47.4
Lsat_1_v5_gn_1_74661 Lactuca sativa HOM05D005408 ORTHO05D006790 3.1e-208 729.6 961 46.7
Psat6g104520 Pisum sativum HOM05D005408 ORTHO05D006790 2.0e-207 726.9 778 54.1
Glyma.02G003800 Glycine max HOM05D005408 ORTHO05D006790 3.4e-207 726.1 691 56.7
SGA_v2.0_scaffold43G16217 Striga asiatica HOM05D005408 ORTHO05D006790 4.6e-204 715.7 986 46.5
Glyma.10G004700 Glycine max HOM05D005408 ORTHO05D006790 1.3e-203 714.1 671 57.1
VMungo0720G1073 Vigna mungo HOM05D005408 ORTHO05D006790 2.3e-203 713.4 733 53.3
Medtr1g041685 Medicago truncatula HOM05D005408 ORTHO05D006790 4.3e-202 709.1 835 51.5
Phvul.007G275400 Phaseolus vulgaris HOM05D005408 ORTHO05D006790 9.6e-202 708.0 679 57.1
TPR.G25189 Trifolium pratense HOM05D005408 ORTHO05D006790 6.3e-201 705.3 729 54.9
Ca_03010_v3 Cicer arietinum L. HOM05D005408 ORTHO05D006790 8.5e-198 694.9 751 53.3
Migut.G00502 Erythranthe guttata HOM05D005408 ORTHO05D006790 7.7e-191 671.8 952 45.6
HanXRQChr01g0023201 Helianthus annuus HOM05D005408 ORTHO05D006790 1.4e-189 667.5 973 45.4
SGA_v2.0_scaffold101G29731 Striga asiatica HOM05D005408 ORTHO05D006790 1.0e-187 661.4 908 46.7
MSTRG.4147 Avicennia marina HOM05D005408 ORTHO05D006790 2.6e-186 656.8 739 50.5
ATR0736G089 Amborella trichopoda HOM05D005408 ORTHO05D006790 2.0e-183 647.1 726 50.7
Zm00001eb191660 Zea mays HOM05D005408 ORTHO05D006790 6.7e-179 632.1 681 50.2
Zm00001eb258510 Zea mays HOM05D005408 ORTHO05D006790 8.2e-177 625.2 734 48.1
CDE07G1006 Ceratophyllum demersum HOM05D005408 ORTHO05D006790 8.5e-166 588.6 1021 40.9
CDE04G2551 Ceratophyllum demersum HOM05D005408 ORTHO05D006790 1.8e-163 580.9 1035 39.9
SEGI_14734 Sequoiadendron giganteum HOM05D005408 ORTHO05D006790 3.2e-144 516.9 697 43.5
unitig_736.g22443 Utricularia gibba HOM05D005408 ORTHO05D006790 2.7e-143 513.8 867 41.2
Ah.13g072600 Amaranthus hybridus HOM05D005408 ORTHO05D006790 1.3e-137 495.0 698 47.7
HPP92_008326 Vanilla planifolia HOM05D005408 ORTHO05D006790 1.6e-135 488.0 893 38.3
TPR.G25191 Trifolium pratense HOM05D005408 ORTHO05D006790 2.4e-112 411.0 667 40.9
Mapoly0063s0094 Marchantia polymorpha HOM05D005408 ORTHO05D006790 1.1e-93 349.0 553 36.2
Os02g0809900 Oryza sativa ssp. japonica HOM05D005408 ORTHO05D006790 1.4e-88 332.0 306 54.2
Pp3c16_10130 Physcomitrium patens HOM05D005408 ORTHO05D006790 3.5e-87 327.4 947 28.4
Pp3c25_7300 Physcomitrium patens HOM05D005408 ORTHO05D006790 1.6e-84 318.5 923 29.9
AagrBONN_evm.TU.Sc2ySwM_228.3605 Anthoceros agrestis HOM05D005408 ORTHO05D006790 3.4e-82 310.8 519 37.4
SalBow8G3468 Salvia bowleyana HOM05D005408 ORTHO05D006790 4.7e-39 167.5 233 41.6
SalBow7G4774 Salvia bowleyana HOM05D005408 ORTHO05D006790 1.7e-36 159.1 114 68.4
CiPaw.06G041800 Carya illinoinensis HOM05D005408 ORTHO05D006790 3.6e-31 141.4 334 42.8
Rhsim02G0041700 Rhododendron simsii HOM05D005408 ORTHO05D006790 4.6e-26 124.4 190 43.2
CBR_g30942 Chara braunii HOM05D005408 ORTHO05D006790 5.6e-24 117.5 399 28.6
Hund11908 Selenicereus undatus HOM05D005408 ORTHO05D006790 7.0e-19 100.5 154 42.9
C04p41430 Brassica napus HOM05D005408 ORTHO05D006790 9.5e-16 90.1 141 43.3
BolC4t25724H Brassica oleracea HOM05D005408 ORTHO05D006790 1.2e-15 89.7 141 43.3
A04p07780 Brassica napus HOM05D005408 ORTHO05D006790 2.8e-15 88.6 83 62.7
BolC4t25725H Brassica oleracea HOM05D005408 ORTHO05D006790 4.7e-15 87.8 102 48.0
C04p41440 Brassica napus HOM05D005408 ORTHO05D006790 2.0e-13 82.4 102 47.1
BcaC02g09333 Brassica carinata HOM05D005408 ORTHO05D006790 1.3e-09 69.7 77 54.5


User provided reference genes

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