Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc43.75 Carica papaya HOM05D006962 ORTHO05D008696 1.6e-186 656.0 343 100.0
GSVIVG01010505001 Vitis vinifera HOM05D006962 ORTHO05D008696 2.2e-26 124.0 106 64.2
QL03p052240 Quercus lobata HOM05D006962 ORTHO05D008696 4.3e-22 109.8 172 40.1
TWI75G0385 Tripterygium wilfordii HOM05D006962 ORTHO05D008696 8.1e-21 105.5 127 48.0
CiPaw.05G108100 Carya illinoinensis HOM05D006962 ORTHO05D008696 1.1e-20 105.1 153 42.5
Eucgr.B03508 Eucalyptus grandis HOM05D006962 ORTHO05D008696 4.0e-20 103.2 169 38.5
Manes.13G010300 Manihot esculenta HOM05D006962 ORTHO05D008696 2.6e-19 100.5 158 44.9
Nn3g16434 Nelumbo nucifera HOM05D006962 ORTHO05D008696 2.6e-19 100.5 104 51.9
Sopen05g011100 Solanum pennellii HOM05D006962 ORTHO05D008696 2.6e-19 100.5 116 49.1
Hma1.2p1_0657F.1_g197165 Hydrangea macrophylla HOM05D006962 ORTHO05D008696 3.4e-19 100.1 109 55.0
Hma1.2p1_0967F.1_g242360 Hydrangea macrophylla HOM05D006962 ORTHO05D008696 3.4e-19 100.1 109 55.0
CANSAT01G0828 Cannabis sativa HOM05D006962 ORTHO05D008696 5.8e-19 99.4 139 44.6
CSS0033119 Camellia sinensis var. sinensis HOM05D006962 ORTHO05D008696 7.6e-19 99.0 148 43.9
TAR629G1477 Trochodendron aralioides HOM05D006962 ORTHO05D008696 1.7e-18 97.8 165 40.6
MSTRG.13306 Avicennia marina HOM05D006962 ORTHO05D008696 2.9e-18 97.1 182 39.0
Solyc05g015640.3 Solanum lycopersicum HOM05D006962 ORTHO05D008696 3.8e-18 96.7 116 47.4
Glyma.18G005200 Glycine max HOM05D006962 ORTHO05D008696 4.9e-18 96.3 146 41.8
Peaxi162Scf00128g01332 Petunia axillaris HOM05D006962 ORTHO05D008696 6.4e-18 95.9 178 36.5
Cc11_g17050 Coffea canephora HOM05D006962 ORTHO05D008696 1.1e-17 95.1 135 45.9
Thecc.02G205200 Theobroma cacao HOM05D006962 ORTHO05D008696 1.1e-17 95.1 175 38.9
Gohir.A04G140400 Gossypium hirsutum HOM05D006962 ORTHO05D008696 1.4e-17 94.7 185 37.8
PGSC0003DMG400034312 Solanum tuberosum HOM05D006962 ORTHO05D008696 1.4e-17 94.7 162 37.7
Dinv17575 Davidia involucrata HOM05D006962 ORTHO05D008696 3.2e-17 93.6 156 42.3
Gohir.D04G183600 Gossypium hirsutum HOM05D006962 ORTHO05D008696 3.2e-17 93.6 188 38.3
Nitab4.5_0006369g0010 Nicotiana tabacum HOM05D006962 ORTHO05D008696 3.2e-17 93.6 159 38.4
Psat5g097440 Pisum sativum HOM05D006962 ORTHO05D008696 5.4e-17 92.8 178 36.0
THA.LOC104807506 Tarenaya hassleriana HOM05D006962 ORTHO05D008696 5.4e-17 92.8 125 46.4
arahy.Tifrunner.gnm1.ann1.AWLH2F Arachis hypogaea HOM05D006962 ORTHO05D008696 7.1e-17 92.4 181 36.5
Ciclev10032798m.g Citrus clementina HOM05D006962 ORTHO05D008696 7.1e-17 92.4 175 39.4
Gorai.012G176600 Gossypium raimondii HOM05D006962 ORTHO05D008696 9.3e-17 92.0 186 36.6
Phvul.001G262900 Phaseolus vulgaris HOM05D006962 ORTHO05D008696 9.3e-17 92.0 144 40.3
ClCG06G002190 Citrullus lanatus HOM05D006962 ORTHO05D008696 1.6e-16 91.3 176 37.5
Sc14g0009120 Simmondsia chinensis HOM05D006962 ORTHO05D008696 1.6e-16 91.3 102 49.0
Medtr3g085060 Medicago truncatula HOM05D006962 ORTHO05D008696 2.1e-16 90.9 150 37.3
MELO3C022311.2 Cucumis melo HOM05D006962 ORTHO05D008696 3.5e-16 90.1 177 37.3
Lsat_1_v5_gn_4_641 Lactuca sativa HOM05D006962 ORTHO05D008696 3.5e-16 90.1 107 44.9
COL.COLO4_20424 Corchorus olitorius HOM05D006962 ORTHO05D008696 7.9e-16 89.0 119 42.9
Potri.003G170700 Populus trichocarpa HOM05D006962 ORTHO05D008696 1.3e-15 88.2 183 34.4
PGR102G1052 Punica granatum HOM05D006962 ORTHO05D008696 1.3e-15 88.2 113 46.9
Nitab4.5_0000996g0010 Nicotiana tabacum HOM05D006962 ORTHO05D008696 2.3e-15 87.4 173 34.1
MBI07_g28246_MAGBIO Magnolia biondii HOM05D006962 ORTHO05D008696 3.0e-15 87.0 148 37.2
Lalb_Chr23g0278151 Lupinus albus HOM05D006962 ORTHO05D008696 5.1e-15 86.3 158 37.3
Cfa009377 Carpinus fangiana HOM05D006962 ORTHO05D008696 6.6e-15 85.9 155 38.1
FvH4_4g23570 Fragaria vesca HOM05D006962 ORTHO05D008696 6.6e-15 85.9 162 36.4
Prupe.1G224100 Prunus persica HOM05D006962 ORTHO05D008696 1.1e-14 85.1 118 44.9
Sed0011154 Sechium edule HOM05D006962 ORTHO05D008696 1.5e-14 84.7 146 36.3
PSO017G7099 Papaver somniferum HOM05D006962 ORTHO05D008696 3.3e-14 83.6 206 31.6
Potri.001G057700 Populus trichocarpa HOM05D006962 ORTHO05D008696 3.3e-14 83.6 160 36.2
CsaV3_6G008260 Cucumis sativus L. HOM05D006962 ORTHO05D008696 4.3e-14 83.2 176 35.2
Ca_16448_v3 Cicer arietinum L. HOM05D006962 ORTHO05D008696 5.6e-14 82.8 173 36.4
MBI07_g11269_MAGBIO Magnolia biondii HOM05D006962 ORTHO05D008696 5.6e-14 82.8 183 32.2
TAR636G2109 Trochodendron aralioides HOM05D006962 ORTHO05D008696 5.6e-14 82.8 104 48.1
VMungo1383G1469 Vigna mungo HOM05D006962 ORTHO05D008696 5.6e-14 82.8 171 36.3
CAN.G1124.2 Capsicum annuum HOM05D006962 ORTHO05D008696 7.3e-14 82.4 158 34.2
Duzib251G0823 Durio zibethinus HOM05D006962 ORTHO05D008696 1.3e-13 81.6 329 27.1
ECA234G1956 Erigeron canadensis HOM05D006962 ORTHO05D008696 1.3e-13 81.6 115 43.5
Sabra01G0041700 Salix brachista HOM05D000660 ORTHO05D000766 1.6e-13 81.3 144 36.1
TPR.G17769 Trifolium pratense HOM05D006962 ORTHO05D008696 2.1e-13 80.9 161 36.0
Lj6g0020338 Lotus japonicus HOM05D006962 ORTHO05D008696 2.8e-13 80.5 179 32.4
Atru.chr11.2343 Acer truncatum HOM05D006962 ORTHO05D008696 3.6e-13 80.1 132 38.6
Haze_12436 Corylus avellana HOM05D006962 ORTHO05D008696 3.6e-13 80.1 178 33.7
MD16G1121100 Malus domestica HOM05D006962 ORTHO05D008696 4.8e-13 79.7 119 38.7
PSO478G2808 Papaver somniferum HOM05D006962 ORTHO05D008696 8.1e-13 79.0 178 32.6
AUR62005637 Chenopodium quinoa HOM05D006962 ORTHO05D008696 1.1e-12 78.6 129 38.8
Sp1g23540 Schrenkiella parvula HOM05D006962 ORTHO05D008696 1.4e-12 78.2 110 42.7
AUR62028912 Chenopodium quinoa HOM05D006962 ORTHO05D008696 2.4e-12 77.4 111 40.5
SGA_v2.0_scaffold87G27164 Striga asiatica HOM05D006962 ORTHO05D008696 3.1e-12 77.0 117 41.0
Sabra03G0124800 Salix brachista HOM05D006962 ORTHO05D008696 4.0e-12 76.6 183 32.2
AL1G40700 Arabidopsis lyrata HOM05D006962 ORTHO05D008696 5.3e-12 76.3 174 37.4
BcaC05g26545 Brassica carinata HOM05D006962 ORTHO05D008696 5.3e-12 76.3 142 33.8
C07p17910 Brassica napus HOM05D006962 ORTHO05D008696 5.3e-12 76.3 168 36.3
BcaC05g26736 Brassica carinata HOM05D006962 ORTHO05D008696 6.9e-12 75.9 173 34.7
C05p26000 Brassica napus HOM05D006962 ORTHO05D008696 6.9e-12 75.9 142 33.8
BolC5t31319H Brassica oleracea HOM05D006962 ORTHO05D008696 6.9e-12 75.9 142 33.8
CARHR026870 Cardamine hirsuta HOM05D006962 ORTHO05D008696 6.9e-12 75.9 108 47.2
Migut.E00010 Erythranthe guttata HOM05D006962 ORTHO05D008696 6.9e-12 75.9 172 34.3
Gohir.D02G147600 Gossypium hirsutum HOM05D006962 ORTHO05D008696 6.9e-12 75.9 186 31.2
MELO3C032628.2 Cucumis melo HOM05D006962 ORTHO05D008696 9.0e-12 75.5 153 33.3
HanXRQChr08g0214941 Helianthus annuus HOM05D006962 ORTHO05D008696 9.0e-12 75.5 165 34.5
Gohir.A03G124600 Gossypium hirsutum HOM05D006962 ORTHO05D008696 1.2e-11 75.1 127 36.2
CDE05G3434 Ceratophyllum demersum HOM05D006962 ORTHO05D008696 2.0e-11 74.3 109 36.7
TAR629G0477 Trochodendron aralioides HOM05D006962 ORTHO05D008696 2.0e-11 74.3 82 51.2
BcaB03g14005 Brassica carinata HOM05D006962 ORTHO05D008696 2.6e-11 73.9 110 43.6
Aqoxy3G01577 Aquilegia oxysepala HOM05D006962 ORTHO05D008696 3.4e-11 73.6 175 34.3
A09p38640 Brassica napus HOM05D006962 ORTHO05D008696 4.5e-11 73.2 177 33.9
BraA09t39370Z Brassica rapa HOM05D006962 ORTHO05D008696 4.5e-11 73.2 177 33.9
BolC7t42297H Brassica oleracea HOM05D006962 ORTHO05D008696 5.8e-11 72.8 168 35.7
Gorai.005G165400 Gossypium raimondii HOM05D006962 ORTHO05D008696 5.8e-11 72.8 183 31.1
CsaV3_4G003050 Cucumis sativus L. HOM05D006962 ORTHO05D008696 7.6e-11 72.4 151 34.4
RcHm_v2.0_Chr4g0429971 Rosa chinensis HOM05D006962 ORTHO05D008696 9.9e-11 72.0 166 34.3
ClCG07G015460 Citrullus lanatus HOM05D006962 ORTHO05D008696 1.7e-10 71.2 178 31.5
Hund25473 Selenicereus undatus HOM05D006962 ORTHO05D008696 1.7e-10 71.2 64 46.9
AT1G27300 Arabidopsis thaliana HOM05D006962 ORTHO05D008696 2.2e-10 70.9 91 45.1
BcaNung06812 Brassica carinata HOM05D006962 ORTHO05D008696 2.9e-10 70.5 168 35.1
Carub.0001s2583 Capsella rubella HOM05D006962 ORTHO05D008696 3.8e-10 70.1 97 43.3
Thhalv10008828m.g Eutrema salsugineum HOM05D006962 ORTHO05D008696 3.8e-10 70.1 172 33.1
Ah.03g136040 Amaranthus hybridus HOM05D006962 ORTHO05D008696 6.4e-10 69.3 130 38.5
Rhsim12G0024900 Rhododendron simsii HOM05D006962 ORTHO05D008696 8.4e-10 68.9 143 35.7
A07p11980 Brassica napus HOM05D006962 ORTHO05D008696 2.4e-09 67.4 95 38.9
ATR0561G196 Amborella trichopoda HOM05D006962 ORTHO05D008696 5.4e-09 66.2 133 34.6
Actinidia08062 Actinidia chinensis HOM05D006962 ORTHO05D008696 7.1e-09 65.9 71 52.1
BraA07t28983Z Brassica rapa HOM05D006962 ORTHO05D008696 1.2e-08 65.1 95 42.1
Glyma.11G251800 Glycine max HOM05D006962 ORTHO05D008696 2.1e-08 64.3 124 37.9
DCAR_007000 Daucus carota HOM05D006962 ORTHO05D008696 4.6e-08 63.2 154 31.2
Aa31LG7G9900 Aethionema arabicum HOM05D006962 ORTHO05D008696 1.3e-07 61.6 104 35.6
Gohir.D03G043133 Gossypium hirsutum HOM05D006962 ORTHO05D008696 1.8e-07 61.2 107 37.4
Os02g0509600 Oryza sativa ssp. japonica HOM05D006962 ORTHO05D008696 2.3e-07 60.8 108 32.4
Zm00001eb241800 Zea mays HOM05D006962 ORTHO05D008696 8.7e-07 58.9 114 35.1
Zm00001eb180910 Zea mays HOM05D006962 ORTHO05D008696 1.5e-06 58.2 193 29.0
Gorai.003G044100 Gossypium raimondii HOM05D006962 ORTHO05D008696 5.6e-06 56.2 107 37.4
SMO141G0097 Selaginella moellendorffii HOM05D002663 ORTHO05D021316 7.4e-06 55.8 87 31.0


User provided reference genes

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