Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc43.67 Carica papaya HOM05D011552 ORTHO05D016897 4.0e-235 817.8 426 100.0
Cpa.g.sc37.60 Carica papaya HOM05D009428 ORTHO05D000007 4.5e-53 213.0 269 49.1
Cpa.g.sc1.342 Carica papaya HOM05D009428 ORTHO05D000007 8.5e-44 182.2 313 41.5
Cpa.g.c32310 Carica papaya HOM05D011552 ORTHO05D016897 3.7e-39 166.8 170 55.3
Cpa.g.sc75.75 Carica papaya HOM05D009428 ORTHO05D016897 2.9e-36 157.1 208 49.0
Cpa.g.sc33.94 Carica papaya HOM05D011552 ORTHO05D000007 1.4e-33 148.3 191 46.6
Cpa.g.sc203.9 Carica papaya HOM05D009428 ORTHO05D000007 3.3e-32 143.7 230 41.7
Cpa.g.sc198.33 Carica papaya HOM05D009428 ORTHO05D013058 2.0e-29 134.4 187 43.9
Cpa.g.sc27.23 Carica papaya HOM05D009428 ORTHO05D000007 5.0e-28 129.8 123 59.3
Cpa.g.sc21.129 Carica papaya HOM05D009428 ORTHO05D013058 5.5e-27 126.3 161 51.6
Cpa.g.sc36.208 Carica papaya HOM05D011552 ORTHO05D117624 4.5e-21 106.7 102 53.9
Cpa.g.sc36.207 Carica papaya HOM05D000003 ORTHO05D000007 5.9e-21 106.3 99 57.6
Cpa.g.sc60.36 Carica papaya HOM05D011552 ORTHO05D016193 1.0e-20 105.5 129 48.8
Cpa.g.sc40.27 Carica papaya HOM05D009428 ORTHO05D013058 1.7e-20 104.8 152 46.1
Cpa.g.sc2.282 Carica papaya HOM05D000003 ORTHO05D000007 6.5e-20 102.8 81 64.2
Cpa.g.sc281.5 Carica papaya HOM05D009428 ORTHO05D000007 3.2e-19 100.5 82 61.0
Cpa.g.sc16.67 Carica papaya HOM05D000003 ORTHO05D000007 1.4e-14 85.1 69 55.1
Cpa.g.sc4.197 Carica papaya HOM05D000003 ORTHO05D000007 1.4e-14 85.1 67 58.2
Cpa.g.sc14.129 Carica papaya HOM05D011552 ORTHO05D116944 5.4e-14 83.2 120 41.7
Cpa.g.sc3.206 Carica papaya HOM05D009428 ORTHO05D013058 4.5e-13 80.1 247 32.4
Cpa.g.c33197.1 Carica papaya HOM05D000003 ORTHO05D000007 5.9e-13 79.7 123 39.8
Ciclev10013460m.g Citrus clementina HOM05D000003 ORTHO05D000007 5.9e-13 79.7 86 47.7
TWI56G1353 Tripterygium wilfordii HOM05D000003 ORTHO05D000007 8.5e-12 75.9 67 47.8
EL10Ac5g10755 Beta vulgaris HOM05D000003 ORTHO05D000007 1.8e-09 68.2 68 47.1
Gorai.005G174000 Gossypium raimondii HOM05D023395 ORTHO05D000007 3.0e-09 67.4 69 47.8
EL10Ac3g06843 Beta vulgaris HOM05D000003 ORTHO05D000007 4.0e-09 67.0 67 44.8
Cpa.g.sc281.3 Carica papaya HOM05D011552 ORTHO05D016193 5.2e-09 66.6 56 62.5
THA.LOC104799464 Tarenaya hassleriana HOM05D000003 ORTHO05D000007 6.8e-09 66.2 68 44.1
Cpa.g.sc3058.2 Carica papaya HOM05D009428 ORTHO05D000007 1.2e-08 65.5 61 47.5
Psat4g084160 Pisum sativum HOM05D000003 ORTHO05D000007 1.5e-08 65.1 89 40.4
Psat5g038720 Pisum sativum HOM05D000003 ORTHO05D000007 2.0e-08 64.7 73 45.2
EL10Ac2g03868 Beta vulgaris HOM05D000003 ORTHO05D000007 3.4e-08 63.9 68 41.2
EL10Ac4g10100 Beta vulgaris HOM05D000003 ORTHO05D000007 3.4e-08 63.9 68 41.2
Cpa.g.c33378.2 Carica papaya HOM05D000003 ORTHO05D000007 5.7e-08 63.2 47 57.4
Manes.07G103102 Manihot esculenta HOM05D000003 ORTHO05D000004 5.7e-08 63.2 67 46.3
EL10Ac6g13602 Beta vulgaris HOM05D000003 ORTHO05D000007 9.8e-08 62.4 79 40.5
TPR.G39739 Trifolium pratense HOM05D000003 ORTHO05D000007 1.7e-07 61.6 67 43.3
TWI81G0242 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 1.7e-07 61.6 67 43.3
Cpa.g.sc1.92 Carica papaya HOM05D009428 ORTHO05D000007 2.8e-07 60.8 54 50.0
Cpa.g.sc198.32 Carica papaya HOM05D009428 ORTHO05D016897 3.7e-07 60.5 124 36.3
Gorai.003G070900 Gossypium raimondii HOM05D000003 ORTHO05D000007 3.7e-07 60.5 69 37.7
Gorai.010G222800 Gossypium raimondii HOM05D000003 ORTHO05D000007 6.3e-07 59.7 67 46.3
Psat5g114840 Pisum sativum HOM05D000003 ORTHO05D000006 6.3e-07 59.7 67 46.3
TPR.G23335 Trifolium pratense HOM05D000003 ORTHO05D000007 8.3e-07 59.3 67 40.3
TPR.G32099 Trifolium pratense HOM05D000003 ORTHO05D000007 1.1e-06 58.9 67 41.8
Cpa.g.sc33.95 Carica papaya HOM05D009428 ORTHO05D013058 1.4e-06 58.5 37 78.4
EL10Ac8g19003 Beta vulgaris HOM05D000003 ORTHO05D000007 1.8e-06 58.2 69 43.5
Cpa.g.sc32.69 Carica papaya HOM05D000003 ORTHO05D000007 1.8e-06 58.2 36 77.8
Gorai.009G311100 Gossypium raimondii HOM05D000003 ORTHO05D000007 2.4e-06 57.8 72 34.7
Gorai.N011700 Gossypium raimondii HOM05D000003 ORTHO05D000007 2.4e-06 57.8 63 46.0
TPR.G22534 Trifolium pratense HOM05D000003 ORTHO05D000007 2.4e-06 57.8 67 41.8
TPR.G511 Trifolium pratense HOM05D000003 ORTHO05D000007 2.4e-06 57.8 67 43.3
Gorai.012G107100 Gossypium raimondii HOM05D000003 ORTHO05D000007 3.1e-06 57.4 62 40.3
TPR.G29860 Trifolium pratense HOM05D004401 ORTHO05D005169 3.1e-06 57.4 67 43.3
Gorai.003G058200 Gossypium raimondii HOM05D024731 ORTHO05D000007 4.1e-06 57.0 92 37.0
Gorai.010G180600 Gossypium raimondii HOM05D000003 ORTHO05D000007 9.1e-06 55.8 69 36.2
TPR.G16044 Trifolium pratense HOM05D000003 ORTHO05D000007 9.1e-06 55.8 67 41.8


User provided reference genes

Program Settings