Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc43.63 Carica papaya HOM05D000159 ORTHO05D000148 2.8e-91 338.6 168 100.0
Manes.12G010200 Manihot esculenta HOM05D000159 ORTHO05D000148 2.1e-14 83.2 87 47.1
Prupe.1G224900 Prunus persica HOM05D000159 ORTHO05D000148 2.8e-14 82.8 81 56.8
Lalb_Chr12g0206091 Lupinus albus HOM05D000159 ORTHO05D000148 1.8e-13 80.1 74 54.1
Duzib268G0026 Durio zibethinus HOM05D000159 ORTHO05D000148 2.3e-13 79.7 80 52.5
COL.COLO4_20413 Corchorus olitorius HOM05D000159 ORTHO05D000148 4.0e-13 79.0 80 52.5
QL03p052489 Quercus lobata HOM05D000159 ORTHO05D000148 4.0e-13 79.0 85 50.6
Dinv24868 Davidia involucrata HOM05D000159 ORTHO05D000148 6.8e-13 78.2 87 47.1
Gorai.002G182700 Gossypium raimondii HOM05D000159 ORTHO05D000148 6.8e-13 78.2 80 51.2
Nitab4.5_0003900g0020 Nicotiana tabacum HOM05D000159 ORTHO05D000148 8.9e-13 77.8 79 50.6
Gohir.A01G154600 Gossypium hirsutum HOM05D000159 ORTHO05D000148 3.4e-12 75.9 80 50.0
Potri.003G172600 Populus trichocarpa HOM05D000159 ORTHO05D000148 4.4e-12 75.5 85 47.1
Thecc.02G206500 Theobroma cacao HOM05D000159 ORTHO05D000148 4.4e-12 75.5 79 51.9
Atru.chr11.2335 Acer truncatum HOM05D000159 ORTHO05D000148 5.7e-12 75.1 74 52.7
TWI75G1778 Tripterygium wilfordii HOM05D000159 ORTHO05D000148 5.7e-12 75.1 75 49.3
GSVIVG01010496001 Vitis vinifera HOM05D000159 ORTHO05D000148 9.8e-12 74.3 81 46.9
Nitab4.5_0000861g0050 Nicotiana tabacum HOM05D000159 ORTHO05D000148 1.3e-11 73.9 80 50.0
RcHm_v2.0_Chr4g0430121 Rosa chinensis HOM05D000159 ORTHO05D000148 1.7e-11 73.6 75 53.3
TWI36G0394 Tripterygium wilfordii HOM05D000159 ORTHO05D000148 1.7e-11 73.6 75 49.3
Ciclev10031391m.g Citrus clementina HOM05D000159 ORTHO05D000148 2.2e-11 73.2 96 45.8
Manes.13G011000 Manihot esculenta HOM05D000159 ORTHO05D000148 2.9e-11 72.8 73 49.3
Oeu006523.1 Olea europaea HOM05D000159 ORTHO05D000148 2.9e-11 72.8 77 46.8
Dinv10948 Davidia involucrata HOM05D000159 ORTHO05D000148 3.7e-11 72.4 88 48.9
TWI18G0107 Tripterygium wilfordii HOM05D000159 ORTHO05D000148 3.7e-11 72.4 87 46.0
FAN07G1077 Fragaria x ananassa HOM05D000159 ORTHO05D000148 4.9e-11 72.0 75 54.7
CSS0049510 Camellia sinensis var. sinensis HOM05D000159 ORTHO05D000148 8.3e-11 71.2 74 50.0
Gohir.A03G125600 Gossypium hirsutum HOM05D000159 ORTHO05D000148 8.3e-11 71.2 77 53.2
FAN17G2684 Fragaria x ananassa HOM05D000159 ORTHO05D000148 1.1e-10 70.9 75 53.3
Potri.001G055900 Populus trichocarpa HOM05D000159 ORTHO05D000148 1.1e-10 70.9 81 45.7
TAR626G0586 Trochodendron aralioides HOM05D000159 ORTHO05D000148 1.4e-10 70.5 73 50.7
CAN.G163.8 Capsicum annuum HOM05D000159 ORTHO05D000148 1.8e-10 70.1 76 50.0
Sabra01G0040300 Salix brachista HOM05D000159 ORTHO05D000148 1.8e-10 70.1 77 45.5
Sabra03G0126300 Salix brachista HOM05D000159 ORTHO05D000148 2.4e-10 69.7 76 47.4
TAR383G0303 Trochodendron aralioides HOM05D000159 ORTHO05D000148 2.4e-10 69.7 73 47.9
CANSAT01G1239 Cannabis sativa HOM05D000159 ORTHO05D000148 4.1e-10 68.9 84 48.8
Gorai.005G166500 Gossypium raimondii HOM05D000159 ORTHO05D000148 4.1e-10 68.9 77 51.9
MD16G1120300 Malus domestica HOM05D000159 ORTHO05D000148 4.1e-10 68.9 80 48.8
FvH4_4g23650 Fragaria vesca HOM05D000159 ORTHO05D000148 5.4e-10 68.6 75 52.0
FAN12G2716 Fragaria x ananassa HOM05D000159 ORTHO05D000148 5.4e-10 68.6 75 52.0
Lj4g0012721 Lotus japonicus HOM05D000159 ORTHO05D000148 5.4e-10 68.6 74 48.6
Peaxi162Scf00128g01331 Petunia axillaris HOM05D000159 ORTHO05D000148 5.4e-10 68.6 116 38.8
PGSC0003DMG400034310 Solanum tuberosum HOM05D000159 ORTHO05D000148 5.4e-10 68.6 122 41.0
Lalb_Chr07g0187101 Lupinus albus HOM05D000159 ORTHO05D000148 9.2e-10 67.8 77 49.4
FAN22G1786 Fragaria x ananassa HOM05D000159 ORTHO05D000148 4.6e-09 65.5 75 50.7
Solyc05g015510.3 Solanum lycopersicum HOM05D000159 ORTHO05D000148 4.6e-09 65.5 100 44.0
Sopen05g010900 Solanum pennellii HOM05D000159 ORTHO05D000148 4.6e-09 65.5 100 44.0
Gohir.D02G148400 Gossypium hirsutum HOM05D000159 ORTHO05D000148 1.7e-08 63.5 77 50.6
MD13G1120300 Malus domestica HOM05D000159 ORTHO05D000148 1.7e-08 63.5 80 45.0
Cc11_g16990 Coffea canephora HOM05D000159 ORTHO05D000148 2.3e-08 63.2 68 52.9
EL10Ac6g13514 Beta vulgaris HOM05D000159 ORTHO05D000148 3.0e-08 62.8 65 52.3
Nn8g41238 Nelumbo nucifera HOM05D000159 ORTHO05D000148 3.0e-08 62.8 71 47.9
Nn5g26966 Nelumbo nucifera HOM05D000159 ORTHO05D000148 5.0e-08 62.0 87 43.7
CSS0030910 Camellia sinensis var. sinensis HOM05D000159 ORTHO05D000148 6.6e-08 61.6 69 49.3
Ca_16452_v3 Cicer arietinum L. HOM05D000159 ORTHO05D000148 8.6e-08 61.2 83 39.8
Haze_12428 Corylus avellana HOM05D000159 ORTHO05D000148 8.6e-08 61.2 84 44.0
TPR.G17775 Trifolium pratense HOM05D000159 ORTHO05D000148 1.1e-07 60.8 79 43.0
Actinidia30641 Actinidia chinensis HOM05D000159 ORTHO05D000148 1.5e-07 60.5 72 50.0
Duzib248G1677 Durio zibethinus HOM05D000159 ORTHO05D000148 1.9e-07 60.1 73 47.9
HanXRQChr17g0569001 Helianthus annuus HOM05D000159 ORTHO05D000148 2.5e-07 59.7 63 47.6
Aqoxy7G02608 Aquilegia oxysepala HOM05D000159 ORTHO05D000148 4.3e-07 58.9 81 44.4
ECA234G1285 Erigeron canadensis HOM05D000159 ORTHO05D000148 5.6e-07 58.5 76 44.7
MBI16_g00826_MAGBIO Magnolia biondii HOM05D000159 ORTHO05D000148 5.6e-07 58.5 71 50.7
Nitab4.5_0007217g0040 Nicotiana tabacum HOM05D000159 ORTHO05D000148 5.6e-07 58.5 53 56.6
Ah.02g130860 Amaranthus hybridus HOM05D000159 ORTHO05D000148 1.2e-06 57.4 118 35.6
MSTRG.8010 Avicennia marina HOM05D000159 ORTHO05D000148 1.2e-06 57.4 67 41.8
Nitab4.5_0001315g0110 Nicotiana tabacum HOM05D000159 ORTHO05D000148 1.6e-06 57.0 67 43.3
Potri.018G149900 Populus trichocarpa HOM05D000159 ORTHO05D000148 2.1e-06 56.6 76 47.4
Psat5g096720 Pisum sativum HOM05D000159 ORTHO05D000148 3.6e-06 55.8 76 40.8
vmacro01056 Vaccinium macrocarpon HOM05D000159 ORTHO05D000148 3.6e-06 55.8 73 45.2
Lj6g0010992 Lotus japonicus HOM05D000159 ORTHO05D000148 4.7e-06 55.5 74 43.2
PGR102G2419 Punica granatum HOM05D000159 ORTHO05D000148 4.7e-06 55.5 108 36.1
Rhsim12G0025200 Rhododendron simsii HOM05D000159 ORTHO05D000148 4.7e-06 55.5 90 41.1
Dinv12626 Davidia involucrata HOM05D000159 ORTHO05D000148 6.2e-06 55.1 79 41.8
Gohir.A04G140300 Gossypium hirsutum HOM05D000159 ORTHO05D000148 8.0e-06 54.7 75 46.7


User provided reference genes

Program Settings