Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc428.3 Carica papaya HOM05D006090 ORTHO05D007600 2.3e-54 215.3 108 100.0
Thhalv10011899m.g Eutrema salsugineum HOM05D006090 ORTHO05D007600 1.8e-27 125.9 70 84.3
BcaB04g17463 Brassica carinata HOM05D006090 ORTHO05D007600 4.1e-27 124.8 70 82.9
Sp1g35110 Schrenkiella parvula HOM05D006090 ORTHO05D007600 5.3e-27 124.4 70 82.9
BcaC07g37170 Brassica carinata HOM05D006090 ORTHO05D007600 9.1e-27 123.6 70 81.4
C08p05430 Brassica napus HOM05D006090 ORTHO05D007600 9.1e-27 123.6 70 81.4
BolC8t47360H Brassica oleracea HOM05D006090 ORTHO05D007600 9.1e-27 123.6 70 81.4
MD05G1171700 Malus domestica HOM05D006090 ORTHO05D007600 9.1e-27 123.6 70 81.4
MD10G1159900 Malus domestica HOM05D006090 ORTHO05D007600 1.2e-26 123.2 70 81.4
Manes.06G087700 Manihot esculenta HOM05D006090 ORTHO05D007600 1.2e-26 123.2 70 78.6
AL1G54720 Arabidopsis lyrata HOM05D006090 ORTHO05D007600 1.5e-26 122.9 70 80.0
Carub.0001s3724 Capsella rubella HOM05D006090 ORTHO05D007600 1.5e-26 122.9 70 80.0
CARHR037780 Cardamine hirsuta HOM05D006090 ORTHO05D007600 1.5e-26 122.9 70 80.0
Prupe.8G199000 Prunus persica HOM05D006090 ORTHO05D007600 1.5e-26 122.9 70 80.0
AT1G48140 Arabidopsis thaliana HOM05D006090 ORTHO05D007600 2.0e-26 122.5 70 78.6
BraA08t32537Z Brassica rapa HOM05D006090 ORTHO05D007600 2.0e-26 122.5 70 81.4
FvH4_2g18550 Fragaria vesca HOM05D006090 ORTHO05D007600 2.6e-26 122.1 70 78.6
FAN15G1212 Fragaria x ananassa HOM05D006090 ORTHO05D007600 2.6e-26 122.1 70 78.6
Thecc.02G015400 Theobroma cacao HOM05D006090 ORTHO05D007600 2.6e-26 122.1 70 80.0
PGR044G2731 Punica granatum HOM05D006090 ORTHO05D007600 3.4e-26 121.7 70 84.3
RcHm_v2.0_Chr6g0284111 Rosa chinensis HOM05D006090 ORTHO05D007600 4.5e-26 121.3 70 78.6
Ciclev10023078m.g Citrus clementina HOM05D006090 ORTHO05D007600 5.9e-26 120.9 70 81.4
Gohir.D07G205600 Gossypium hirsutum HOM05D006090 ORTHO05D007600 5.9e-26 120.9 70 78.6
Duzib138G1257 Durio zibethinus HOM05D006090 ORTHO05D007600 7.7e-26 120.6 69 79.7
Gohir.A07G199200 Gossypium hirsutum HOM05D006090 ORTHO05D007600 7.7e-26 120.6 70 78.6
Hma1.2p1_0052F.1_g030080 Hydrangea macrophylla HOM05D006090 ORTHO05D007600 7.7e-26 120.6 70 80.0
CANSAT21G0941 Cannabis sativa HOM05D006090 ORTHO05D007600 1.0e-25 120.2 70 80.0
Duzib211G0047 Durio zibethinus HOM05D006090 ORTHO05D007600 1.0e-25 120.2 70 78.6
Duzib211G0371 Durio zibethinus HOM05D006090 ORTHO05D007600 1.0e-25 120.2 70 78.6
Gorai.001G231600 Gossypium raimondii HOM05D006090 ORTHO05D007600 1.0e-25 120.2 70 78.6
A08p05190 Brassica napus HOM05D006090 ORTHO05D007600 1.3e-25 119.8 70 80.0
Potri.002G245800 Populus trichocarpa HOM05D006090 ORTHO05D007600 1.3e-25 119.8 70 77.1
Thecc.01G220300 Theobroma cacao HOM05D006090 ORTHO05D007600 1.3e-25 119.8 70 78.6
TWI18G0803 Tripterygium wilfordii HOM05D006090 ORTHO05D007600 1.3e-25 119.8 70 80.0
CSS0021939 Camellia sinensis var. sinensis HOM05D006090 ORTHO05D007600 1.7e-25 119.4 70 77.1
arahy.Tifrunner.gnm1.ann1.7I8V6Q Arachis hypogaea HOM05D006090 ORTHO05D007600 2.9e-25 118.6 70 77.1
arahy.Tifrunner.gnm1.ann1.NKLH1V Arachis hypogaea HOM05D006090 ORTHO05D007600 3.8e-25 118.2 70 75.7
Nn8g41078 Nelumbo nucifera HOM05D006090 ORTHO05D007600 5.0e-25 117.9 70 77.1
Psat3g148760 Pisum sativum HOM05D006090 ORTHO05D007600 5.0e-25 117.9 70 77.1
TWI36G1609 Tripterygium wilfordii HOM05D006090 ORTHO05D007600 5.0e-25 117.9 70 78.6
Dinv19173 Davidia involucrata HOM05D006090 ORTHO05D007600 6.5e-25 117.5 70 75.7
Sp3g06170 Schrenkiella parvula HOM05D006090 ORTHO05D007600 8.5e-25 117.1 69 75.4
TPR.G6479 Trifolium pratense HOM05D006090 ORTHO05D007600 8.5e-25 117.1 70 74.3
Medtr3g437420 Medicago truncatula HOM05D006090 ORTHO05D007600 1.1e-24 116.7 70 72.9
Lj1g0010865 Lotus japonicus HOM05D006090 ORTHO05D007600 1.4e-24 116.3 70 74.3
THA.LOC104802658 Tarenaya hassleriana HOM05D006090 ORTHO05D007600 1.4e-24 116.3 70 77.1
Atru.chr6.1016 Acer truncatum HOM05D006090 ORTHO05D007600 1.9e-24 115.9 70 77.1
Lj5g0019908 Lotus japonicus HOM05D006090 ORTHO05D007600 1.9e-24 115.9 70 75.7
Medtr7g056250 Medicago truncatula HOM05D006090 ORTHO05D007600 1.9e-24 115.9 70 74.3
Rhsim01G0252800 Rhododendron simsii HOM05D006090 ORTHO05D007600 1.9e-24 115.9 70 75.7
vmacro14732 Vaccinium macrocarpon HOM05D006090 ORTHO05D007600 1.9e-24 115.9 70 75.7
Phvul.002G081100 Phaseolus vulgaris HOM05D006090 ORTHO05D007600 2.5e-24 115.5 70 77.1
Cc06_g17130 Coffea canephora HOM05D006090 ORTHO05D007600 3.2e-24 115.2 70 77.1
MELO3C026729.2 Cucumis melo HOM05D006090 ORTHO05D007600 3.2e-24 115.2 70 77.1
Glyma.08G349000 Glycine max HOM05D006090 ORTHO05D007600 3.2e-24 115.2 70 74.3
Sed0025432 Sechium edule HOM05D006090 ORTHO05D007600 3.2e-24 115.2 70 77.1
Ca_06547_v3 Cicer arietinum L. HOM05D006090 ORTHO05D007600 4.2e-24 114.8 70 72.9
Lalb_Chr03g0041481 Lupinus albus HOM05D006090 ORTHO05D007600 4.2e-24 114.8 70 74.3
Cpa.g.sc71.6 Carica papaya HOM05D006090 ORTHO05D007600 5.5e-24 114.4 70 81.4
ClCG10G009020 Citrullus lanatus HOM05D006090 ORTHO05D007600 5.5e-24 114.4 70 75.7
MBI04_g03342_MAGBIO Magnolia biondii HOM05D006090 ORTHO05D007600 7.2e-24 114.0 70 72.9
Sed0016973 Sechium edule HOM05D006090 ORTHO05D007600 9.4e-24 113.6 70 75.7
TWI75G0179 Tripterygium wilfordii HOM05D006090 ORTHO05D007600 9.4e-24 113.6 70 78.6
Hma1.2p1_0226F.1_g095400 Hydrangea macrophylla HOM05D006090 ORTHO05D007600 1.6e-23 112.8 70 72.9
CiPaw.01G050400 Carya illinoinensis HOM05D006090 ORTHO05D007600 2.1e-23 112.5 70 74.3
Phvul.002G080700 Phaseolus vulgaris HOM05D006090 ORTHO05D007600 2.1e-23 112.5 70 74.3
Aa31LG5G17800 Aethionema arabicum HOM05D006090 ORTHO05D007600 2.7e-23 112.1 69 72.5
FAN24G0022 Fragaria x ananassa HOM05D006090 ORTHO05D007600 2.7e-23 112.1 83 65.1
SalBow6G1264 Salvia bowleyana HOM05D006090 ORTHO05D007600 3.6e-23 111.7 70 72.9
SalBow6G7055 Salvia bowleyana HOM05D006090 ORTHO05D007600 3.6e-23 111.7 70 72.9
Aa31LG10G5590 Aethionema arabicum HOM05D006090 ORTHO05D007600 4.7e-23 111.3 77 68.8
EL10Ac7g17901 Beta vulgaris HOM05D006090 ORTHO05D007600 4.7e-23 111.3 70 71.4
ECA248G3406 Erigeron canadensis HOM05D006090 ORTHO05D007600 4.7e-23 111.3 70 70.0
PSO170G6116 Papaver somniferum HOM05D006090 ORTHO05D007600 7.9e-23 110.5 70 72.9
TAR362G1026 Trochodendron aralioides HOM05D006090 ORTHO05D007600 7.9e-23 110.5 70 72.9
BcaC08g43006 Brassica carinata HOM05D006090 ORTHO05D007600 1.0e-22 110.2 70 72.9
C06p02550 Brassica napus HOM05D006090 ORTHO05D007600 1.0e-22 110.2 70 72.9
BolC6t35383H Brassica oleracea HOM05D006090 ORTHO05D007600 1.0e-22 110.2 70 72.9
Eucgr.A02241 Eucalyptus grandis HOM05D006090 ORTHO05D007600 1.0e-22 110.2 70 75.7
Lsat_1_v5_gn_5_180801 Lactuca sativa HOM05D006090 ORTHO05D007600 1.4e-22 109.8 70 70.0
Lj2C1126T3 Lonicera japonica HOM05D006090 ORTHO05D007600 1.4e-22 109.8 68 72.1
PSO445G0009 Papaver somniferum HOM05D006090 ORTHO05D007600 1.4e-22 109.8 70 71.4
Phvul.009G016400 Phaseolus vulgaris HOM05D006090 ORTHO05D007600 1.4e-22 109.8 66 75.8
BcaB04g21317 Brassica carinata HOM05D006090 ORTHO05D007600 1.8e-22 109.4 68 72.1
Lsat_1_v5_gn_8_5041 Lactuca sativa HOM05D006090 ORTHO05D007600 1.8e-22 109.4 70 72.9
PGR004G1711 Punica granatum HOM05D006090 ORTHO05D007600 1.8e-22 109.4 70 74.3
PGSC0003DMG400022770 Solanum tuberosum HOM05D006090 ORTHO05D007600 1.8e-22 109.4 70 71.4
HanXRQChr01g0015271 Helianthus annuus HOM05D006090 ORTHO05D007600 2.3e-22 109.0 70 70.0
Solyc01g005110.3 Solanum lycopersicum HOM05D006090 ORTHO05D007600 2.3e-22 109.0 70 70.0
Sopen01g001130 Solanum pennellii HOM05D006090 ORTHO05D007600 2.3e-22 109.0 70 70.0
Migut.N03342 Erythranthe guttata HOM05D006090 ORTHO05D007600 3.9e-22 108.2 70 70.0
CAN.G282.104 Capsicum annuum HOM05D006090 ORTHO05D007600 5.1e-22 107.8 70 70.0
BNapus_Darmor_BZH_scaffold_109p00180 Brassica napus HOM05D006090 ORTHO05D007600 6.7e-22 107.5 68 73.5
BraA01t04392Z Brassica rapa HOM05D006090 ORTHO05D007600 6.7e-22 107.5 68 73.5
QL02p097583 Quercus lobata HOM05D006090 ORTHO05D007600 8.8e-22 107.1 70 70.0
CAN.G151.21 Capsicum annuum HOM05D006090 ORTHO05D007600 1.1e-21 106.7 70 71.4
Peaxi162Scf01111g00025 Petunia axillaris HOM05D006090 ORTHO05D007600 1.1e-21 106.7 70 71.4
Oeu051534.1 Olea europaea HOM05D006090 ORTHO05D007600 1.5e-21 106.3 70 68.6
QL09p032732 Quercus lobata HOM05D006090 ORTHO05D007600 1.5e-21 106.3 70 71.4
Rhsim13G0047700 Rhododendron simsii HOM05D006090 ORTHO05D007600 1.5e-21 106.3 71 71.8
Nitab4.5_0014260g0010 Nicotiana tabacum HOM05D006090 ORTHO05D007600 4.4e-21 104.8 70 68.6
Nitab4.5_0000521g0090 Nicotiana tabacum HOM05D006090 ORTHO05D007600 7.4e-21 104.0 70 67.1
GSVIVG01028416001 Vitis vinifera HOM05D006090 ORTHO05D007600 1.3e-20 103.2 70 68.6
Os02g0749450 Oryza sativa ssp. japonica HOM05D006090 ORTHO05D007600 2.2e-20 102.4 70 65.7
Zm00001eb059180 Zea mays HOM05D006090 ORTHO05D007600 2.8e-20 102.1 70 68.6
BcaB07g33788 Brassica carinata HOM05D006090 ORTHO05D007600 4.8e-20 101.3 74 66.2
CDE09G0476 Ceratophyllum demersum HOM05D006090 ORTHO05D007600 6.3e-20 100.9 69 65.2
unitig_8.g4837 Utricularia gibba HOM05D006090 ORTHO05D007600 1.5e-18 96.3 70 65.7
Haze_03967 Corylus avellana HOM05D006090 ORTHO05D007600 3.4e-18 95.1 77 63.6
Haze_15253 Corylus avellana HOM05D006090 ORTHO05D007600 4.5e-18 94.7 82 59.8
CDE02G0014 Ceratophyllum demersum HOM05D006090 ORTHO05D007600 5.9e-18 94.4 69 60.9
CiPaw.02G023500 Carya illinoinensis HOM05D006090 ORTHO05D007600 2.2e-17 92.4 71 66.2
HPP92_023706 Vanilla planifolia HOM05D006090 ORTHO05D007600 8.5e-17 90.5 70 60.0
Actinidia30052 Actinidia chinensis HOM05D006090 ORTHO05D007600 3.9e-14 81.6 48 75.0
Eucgr.K03282 Eucalyptus grandis HOM05D006090 ORTHO05D007600 6.3e-12 74.3 45 80.0
Sabra02G0187100 Salix brachista HOM05D006090 ORTHO05D007600 1.4e-11 73.2 41 80.5
Glyma.18G167500 Glycine max HOM05D006090 ORTHO05D007600 1.8e-11 72.8 38 86.8
Mapoly0057s0028 Marchantia polymorpha HOM05D006090 ORTHO05D007600 1.0e-09 67.0 73 47.9
AagrBONN_evm.TU.Sc2ySwM_228.829 Anthoceros agrestis HOM05D006090 ORTHO05D007600 4.2e-08 61.6 73 47.9
TAR633G0277 Trochodendron aralioides HOM05D006090 ORTHO05D007600 2.7e-07 58.9 31 87.1
arahy.Tifrunner.gnm1.ann1.L6G805 Arachis hypogaea HOM05D006090 ORTHO05D007600 4.0e-06 55.1 27 85.2
Pp3c20_9690 Physcomitrium patens HOM05D006090 ORTHO05D007600 8.8e-06 53.9 73 41.1


User provided reference genes

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