Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc42.82 Carica papaya HOM05D006002 ORTHO05D007651 3.9e-69 264.6 127 100.0
Potri.003G221400 Populus trichocarpa HOM05D006002 ORTHO05D007651 1.2e-54 216.5 125 80.0
MD10G1197800 Malus domestica HOM05D006002 ORTHO05D007651 3.9e-53 211.5 126 76.2
Eucgr.F01438 Eucalyptus grandis HOM05D006002 ORTHO05D007651 1.9e-52 209.1 124 77.4
Manes.03G102600 Manihot esculenta HOM05D006002 ORTHO05D007651 3.3e-52 208.4 123 78.0
TWI53G1943 Tripterygium wilfordii HOM05D006002 ORTHO05D007651 3.3e-52 208.4 126 76.2
FvH4_3g16091 Fragaria vesca HOM05D006002 ORTHO05D007651 5.6e-52 207.6 126 73.8
FAN11G0453 Fragaria x ananassa HOM05D006002 ORTHO05D007651 5.6e-52 207.6 126 73.8
Ciclev10020646m.g Citrus clementina HOM05D006002 ORTHO05D007651 7.3e-52 207.2 126 76.2
Prupe.4G144100 Prunus persica HOM05D006002 ORTHO05D007651 1.6e-51 206.1 126 73.8
Dinv42524 Davidia involucrata HOM05D006002 ORTHO05D007651 2.8e-51 205.3 124 75.8
RcHm_v2.0_Chr5g0027061 Rosa chinensis HOM05D006002 ORTHO05D007651 2.8e-51 205.3 126 72.2
QL04p088541 Quercus lobata HOM05D006002 ORTHO05D007651 1.1e-50 203.4 125 72.8
Hma1.2p1_0193F.1_g084460 Hydrangea macrophylla HOM05D006002 ORTHO05D007651 1.4e-50 203.0 122 73.0
Hma1.2p1_0193F.1_g084470 Hydrangea macrophylla HOM05D006002 ORTHO05D007651 1.4e-50 203.0 122 73.0
FAN16G0275 Fragaria x ananassa HOM05D006002 ORTHO05D007651 3.1e-50 201.8 126 70.6
FAN25G3512 Fragaria x ananassa HOM05D006002 ORTHO05D007651 3.1e-50 201.8 126 71.4
GSVIVG01020461001 Vitis vinifera HOM05D006002 ORTHO05D007651 3.1e-50 201.8 126 73.8
Glyma.08G167200 Glycine max HOM05D006002 ORTHO05D007651 4.0e-50 201.4 126 72.2
Duzib168G0541 Durio zibethinus HOM05D006002 ORTHO05D007651 5.2e-50 201.1 126 73.0
CiPaw.11G062100 Carya illinoinensis HOM05D006002 ORTHO05D007651 6.9e-50 200.7 125 72.8
Gohir.1Z049302 Gossypium hirsutum HOM05D006002 ORTHO05D007651 9.0e-50 200.3 126 73.8
Gorai.009G080200 Gossypium raimondii HOM05D006002 ORTHO05D007651 9.0e-50 200.3 126 73.8
Thecc.03G324000 Theobroma cacao HOM05D006002 ORTHO05D007651 9.0e-50 200.3 125 73.6
Glyma.15G260100 Glycine max HOM05D006002 ORTHO05D007651 1.2e-49 199.9 126 72.2
TAR627G1081 Trochodendron aralioides HOM05D006002 ORTHO05D007651 1.2e-49 199.9 125 72.8
Gohir.A05G076100 Gossypium hirsutum HOM05D006002 ORTHO05D007651 2.6e-49 198.7 126 73.0
CSS0008604 Camellia sinensis var. sinensis HOM05D006002 ORTHO05D007651 4.4e-49 198.0 124 71.8
Lj3g0018048 Lotus japonicus HOM05D006002 ORTHO05D007651 5.8e-49 197.6 126 70.6
Sabra03G0164800 Salix brachista HOM05D006002 ORTHO05D007651 5.8e-49 197.6 113 79.6
CANSAT56G1259 Cannabis sativa HOM05D006002 ORTHO05D007651 7.6e-49 197.2 121 75.2
Nn3g20175 Nelumbo nucifera HOM05D006002 ORTHO05D007651 1.3e-48 196.4 126 75.4
Actinidia37107 Actinidia chinensis HOM05D006002 ORTHO05D007651 2.2e-48 195.7 122 71.3
COL.COLO4_25103 Corchorus olitorius HOM05D006002 ORTHO05D007651 2.9e-48 195.3 126 69.8
PGR083G2675 Punica granatum HOM05D006002 ORTHO05D007651 3.8e-48 194.9 126 69.0
vmacro09790 Vaccinium macrocarpon HOM05D006002 ORTHO05D007651 3.8e-48 194.9 124 71.0
CARHR278060 Cardamine hirsuta HOM05D006002 ORTHO05D007651 8.4e-48 193.7 126 69.8
Aa31LG1G17780 Aethionema arabicum HOM05D006002 ORTHO05D007651 1.1e-47 193.4 124 70.2
Psat3g026200 Pisum sativum HOM05D006002 ORTHO05D007651 1.9e-47 192.6 126 68.3
Ah.04g163380 Amaranthus hybridus HOM05D006002 ORTHO05D007651 2.4e-47 192.2 126 69.0
Lalb_Chr25g0284701 Lupinus albus HOM05D006002 ORTHO05D007651 3.2e-47 191.8 126 69.0
AT5G64150 Arabidopsis thaliana HOM05D006002 ORTHO05D007651 4.2e-47 191.4 124 71.0
Thhalv10004403m.g Eutrema salsugineum HOM05D006002 ORTHO05D007651 4.2e-47 191.4 123 73.2
Sp2g27210 Schrenkiella parvula HOM05D006002 ORTHO05D007651 4.2e-47 191.4 123 71.5
Phvul.005G050900 Phaseolus vulgaris HOM05D006002 ORTHO05D007651 7.1e-47 190.7 126 69.8
Cc05_g15870 Coffea canephora HOM05D006002 ORTHO05D007651 1.2e-46 189.9 124 71.0
ClCG11G016270 Citrullus lanatus HOM05D006002 ORTHO05D007651 1.6e-46 189.5 123 66.7
Sed0002243 Sechium edule HOM05D006002 ORTHO05D007651 1.6e-46 189.5 126 65.1
A06p30870 Brassica napus HOM05D006002 ORTHO05D007651 4.6e-46 188.0 123 70.7
arahy.Tifrunner.gnm1.ann1.0RH0I3 Arachis hypogaea HOM05D006002 ORTHO05D007651 1.0e-45 186.8 124 67.7
BolC3t18471H Brassica oleracea HOM05D006002 ORTHO05D007651 1.0e-45 186.8 123 69.9
CsaV3_2G022200 Cucumis sativus L. HOM05D006002 ORTHO05D007651 1.0e-45 186.8 123 66.7
MBI02_g43301_MAGBIO Magnolia biondii HOM05D006002 ORTHO05D007651 1.3e-45 186.4 124 70.2
TPR.G32276 Trifolium pratense HOM05D006002 ORTHO05D007651 1.3e-45 186.4 126 65.9
arahy.Tifrunner.gnm1.ann1.HWL53Q Arachis hypogaea HOM05D006002 ORTHO05D007651 1.7e-45 186.0 124 67.7
CAN.G943.23 Capsicum annuum HOM05D006002 ORTHO05D007651 1.7e-45 186.0 122 68.9
Sopen07g034460 Solanum pennellii HOM05D006002 ORTHO05D007651 2.3e-45 185.7 122 68.9
AL8G41420 Arabidopsis lyrata HOM05D006002 ORTHO05D007651 3.9e-45 184.9 124 69.4
Carub.0008s2494 Capsella rubella HOM05D006002 ORTHO05D007651 3.9e-45 184.9 124 70.2
THA.LOC104819332 Tarenaya hassleriana HOM05D006002 ORTHO05D007651 3.9e-45 184.9 124 68.5
BcaC01g02672 Brassica carinata HOM05D006002 ORTHO05D007651 5.1e-45 184.5 122 69.7
PSO541G1619 Papaver somniferum HOM05D006002 ORTHO05D007651 5.1e-45 184.5 123 68.3
Solyc07g066280.3 Solanum lycopersicum HOM05D006002 ORTHO05D007651 5.1e-45 184.5 122 68.0
Eucgr.F01442 Eucalyptus grandis HOM05D006002 ORTHO05D007651 6.6e-45 184.1 114 74.6
Medtr7g107330 Medicago truncatula HOM05D006002 ORTHO05D007651 6.6e-45 184.1 126 65.9
ECA236G2913 Erigeron canadensis HOM05D006002 ORTHO05D007651 8.7e-45 183.7 124 68.5
HanXRQChr11g0335201 Helianthus annuus HOM05D006002 ORTHO05D007651 8.7e-45 183.7 124 66.9
PSO675G3741 Papaver somniferum HOM05D006002 ORTHO05D007651 8.7e-45 183.7 123 69.1
Hund02296 Selenicereus undatus HOM05D006002 ORTHO05D007651 8.7e-45 183.7 126 67.5
PGSC0003DMG400022243 Solanum tuberosum HOM05D006002 ORTHO05D007651 8.7e-45 183.7 122 68.0
Lj8A185G55 Lonicera japonica HOM05D006002 ORTHO05D007651 1.1e-44 183.3 124 68.5
Rhsim04G0006400 Rhododendron simsii HOM05D006002 ORTHO05D007651 1.5e-44 183.0 124 66.9
BcaB02g09782 Brassica carinata HOM05D006002 ORTHO05D007651 4.3e-44 181.4 121 68.6
Ca_09098_v3 Cicer arietinum L. HOM05D006002 ORTHO05D007651 4.3e-44 181.4 124 64.5
Sc03g0007860 Simmondsia chinensis HOM05D006002 ORTHO05D007651 4.3e-44 181.4 124 68.5
Peaxi162Scf00232g00102 Petunia axillaris HOM05D006002 ORTHO05D007651 7.3e-44 180.6 122 64.8
Aqoxy1G01586 Aquilegia oxysepala HOM05D006002 ORTHO05D007651 2.1e-43 179.1 126 66.7
Nitab4.5_0000294g0110 Nicotiana tabacum HOM05D006002 ORTHO05D007651 2.8e-43 178.7 122 66.4
MSTRG.16122 Avicennia marina HOM05D006002 ORTHO05D007651 4.8e-43 177.9 124 63.7
Lsat_1_v5_gn_7_116060 Lactuca sativa HOM05D006002 ORTHO05D007651 4.8e-43 177.9 124 66.1
Migut.M01570 Erythranthe guttata HOM05D006002 ORTHO05D007651 6.2e-43 177.6 122 67.2
SGA_v2.0_scaffold7G03564 Striga asiatica HOM05D006002 ORTHO05D007651 8.1e-43 177.2 124 66.9
BraA06t26026Z Brassica rapa HOM05D006002 ORTHO05D007651 1.1e-42 176.8 117 69.2
EL10Ac4g08518 Beta vulgaris HOM05D006002 ORTHO05D007651 2.4e-42 175.6 124 64.5
CDE02G2905 Ceratophyllum demersum HOM05D006002 ORTHO05D007651 5.3e-42 174.5 124 67.7
C03p62100 Brassica napus HOM05D006002 ORTHO05D007651 6.9e-42 174.1 117 68.4
Nitab4.5_0001235g0050 Nicotiana tabacum HOM05D006002 ORTHO05D007651 6.9e-42 174.1 123 65.9
Os12g0612500 Oryza sativa ssp. japonica HOM05D006002 ORTHO05D007651 1.2e-41 173.3 126 62.7
Haze_07820 Corylus avellana HOM05D006002 ORTHO05D007651 1.5e-41 172.9 109 72.5
VMungo1080G0998 Vigna mungo HOM05D001395 ORTHO05D002039 2.6e-41 172.2 115 67.8
unitig_748.g7639 Utricularia gibba HOM05D006002 ORTHO05D007651 5.8e-41 171.0 124 60.5
MBI02_g20986_MAGBIO Magnolia biondii HOM05D006002 ORTHO05D007651 7.6e-41 170.6 124 66.9
Zm00001eb031660 Zea mays HOM05D006002 ORTHO05D007651 1.3e-40 169.9 126 61.9
SalBow8G1862 Salvia bowleyana HOM05D006002 ORTHO05D007651 2.9e-40 168.7 122 66.4
ATR0165G036 Amborella trichopoda HOM05D006002 ORTHO05D007651 4.2e-39 164.9 126 63.5
HPP92_001894 Vanilla planifolia HOM05D006002 ORTHO05D004222 5.4e-39 164.5 121 63.6
Gohir.D05G078800 Gossypium hirsutum HOM05D006002 ORTHO05D007651 2.7e-38 162.2 104 72.1
SEGI_15629 Sequoiadendron giganteum HOM05D006002 ORTHO05D007651 1.1e-34 150.2 122 56.6
QL04p088993 Quercus lobata HOM05D006002 ORTHO05D007651 3.1e-34 148.7 82 81.7
Mapoly0051s0043 Marchantia polymorpha HOM05D006002 ORTHO05D007651 1.1e-31 140.2 134 52.2
AUR62041934 Chenopodium quinoa HOM05D006002 ORTHO05D007651 4.2e-31 138.3 82 76.8
MELO3C010553.2 Cucumis melo HOM05D006002 ORTHO05D007651 7.1e-31 137.5 82 73.2
QL03p043202 Quercus lobata HOM05D006002 ORTHO05D007651 1.2e-30 136.7 83 73.5
AUR62035491 Chenopodium quinoa HOM05D006002 ORTHO05D007651 1.6e-30 136.3 82 75.6
Pp3c1_22930 Physcomitrium patens HOM05D006002 ORTHO05D007651 3.5e-30 135.2 134 51.5
COL.COLO4_30126 Corchorus olitorius HOM05D006002 ORTHO05D007651 6.0e-30 134.4 84 72.6
MD05G1214000 Malus domestica HOM05D006002 ORTHO05D007651 1.0e-29 133.7 84 72.6
Potri.018G000850 Populus trichocarpa HOM05D006002 ORTHO05D007651 2.3e-29 132.5 98 67.3
SMO145G0236 Selaginella moellendorffii HOM05D006002 ORTHO05D007651 6.2e-27 124.4 123 50.4
AagrBONN_evm.TU.Sc2ySwM_344.4971 Anthoceros agrestis HOM05D006002 ORTHO05D007651 9.0e-26 120.6 124 52.4
CBR_g8978 Chara braunii HOM05D006002 ORTHO05D007651 2.0e-25 119.4 97 58.8
SEGI_37419 Sequoiadendron giganteum HOM05D006002 ORTHO05D007651 3.2e-23 112.1 80 63.8
QL04p089868 Quercus lobata HOM05D006002 ORTHO05D007651 7.9e-22 107.5 71 73.2
Cre07.g337516 Chlamydomonas reinhardtii HOM05D006002 ORTHO05D007651 5.1e-21 104.8 150 41.3
MCO01G477 Micromonas commoda HOM05D006002 ORTHO05D007651 1.9e-20 102.8 138 41.3
QL03p043192 Quercus lobata HOM05D006002 ORTHO05D007651 1.9e-20 102.8 60 81.7
QL04p089617 Quercus lobata HOM05D002182 ORTHO05D004671 1.9e-20 102.8 60 81.7
PRCOL_00003514 Prasinoderma coloniale HOM05D006002 ORTHO05D007651 1.2e-09 67.0 140 32.9
Potri.001G003632 Populus trichocarpa HOM05D006002 ORTHO05D007651 2.0e-09 66.2 35 80.0
PSO675G4619 Papaver somniferum HOM05D000047 ORTHO05D000044 9.4e-07 57.4 106 32.1


User provided reference genes

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