Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc42.79 Carica papaya HOM05D006002 ORTHO05D007651 1.9e-181 639.0 328 100.0
QL04p088541 Quercus lobata HOM05D006002 ORTHO05D007651 2.8e-79 299.7 215 68.4
QL04p088993 Quercus lobata HOM05D006002 ORTHO05D007651 8.1e-79 298.1 203 70.4
Cfa022974 Carpinus fangiana HOM05D006002 ORTHO05D007651 1.3e-76 290.8 227 65.2
Manes.03G102600 Manihot esculenta HOM05D006002 ORTHO05D007651 1.3e-76 290.8 227 66.5
TAR627G1081 Trochodendron aralioides HOM05D006002 ORTHO05D007651 1.3e-76 290.8 221 65.2
Atru.chr2.1886 Acer truncatum HOM05D006002 ORTHO05D007651 1.4e-75 287.3 230 62.2
Prupe.4G144100 Prunus persica HOM05D006002 ORTHO05D007651 4.2e-75 285.8 215 67.4
Ca_09098_v3 Cicer arietinum L. HOM05D006002 ORTHO05D007651 1.2e-74 284.3 216 63.9
Nn3g20175 Nelumbo nucifera HOM05D006002 ORTHO05D007651 2.1e-74 283.5 230 61.3
Haze_07820 Corylus avellana HOM05D006002 ORTHO05D007651 3.9e-73 279.3 196 68.9
CANSAT56G1259 Cannabis sativa HOM05D006002 ORTHO05D007651 6.7e-73 278.5 253 58.9
TWI53G1943 Tripterygium wilfordii HOM05D006002 ORTHO05D007651 1.1e-72 277.7 217 64.5
Psat3g026200 Pisum sativum HOM05D006002 ORTHO05D007651 7.4e-72 275.0 215 61.9
THA.LOC104819332 Tarenaya hassleriana HOM05D006002 ORTHO05D007651 1.3e-71 274.2 202 67.3
Glyma.15G260100 Glycine max HOM05D006002 ORTHO05D007651 2.1e-71 273.5 215 60.0
MD10G1197800 Malus domestica HOM05D006002 ORTHO05D007651 4.8e-71 272.3 233 61.4
Medtr7g107330 Medicago truncatula HOM05D006002 ORTHO05D007651 1.1e-70 271.2 216 61.6
Hma1.2p1_0193F.1_g084460 Hydrangea macrophylla HOM05D006002 ORTHO05D007651 2.4e-70 270.0 212 65.6
Hma1.2p1_0193F.1_g084470 Hydrangea macrophylla HOM05D006002 ORTHO05D007651 2.4e-70 270.0 205 66.8
Potri.003G221400 Populus trichocarpa HOM05D006002 ORTHO05D007651 4.1e-70 269.2 260 57.3
Rhsim04G0006400 Rhododendron simsii HOM05D006002 ORTHO05D007651 4.1e-70 269.2 231 61.0
arahy.Tifrunner.gnm1.ann1.0RH0I3 Arachis hypogaea HOM05D006002 ORTHO05D007651 4.5e-69 265.8 217 61.8
arahy.Tifrunner.gnm1.ann1.HWL53Q Arachis hypogaea HOM05D006002 ORTHO05D007651 7.6e-69 265.0 217 61.3
PGSC0003DMG400022243 Solanum tuberosum HOM05D006002 ORTHO05D007651 1.0e-68 264.6 217 63.1
Ciclev10020646m.g Citrus clementina HOM05D006002 ORTHO05D007651 1.3e-68 264.2 191 65.4
Sopen07g034460 Solanum pennellii HOM05D006002 ORTHO05D007651 2.2e-68 263.5 213 63.8
vmacro09790 Vaccinium macrocarpon HOM05D006002 ORTHO05D007651 2.2e-68 263.5 231 61.9
Oeu052016.1 Olea europaea HOM05D006002 ORTHO05D007651 2.9e-68 263.1 221 61.1
Actinidia37107 Actinidia chinensis HOM05D006002 ORTHO05D007651 5.0e-68 262.3 237 62.0
Sabra03G0164800 Salix brachista HOM05D006002 ORTHO05D007651 5.0e-68 262.3 219 62.1
Hund02296 Selenicereus undatus HOM05D006002 ORTHO05D007651 5.0e-68 262.3 232 59.9
CsaV3_2G022200 Cucumis sativus L. HOM05D006002 ORTHO05D007651 8.5e-68 261.5 216 62.0
Lj3g0018048 Lotus japonicus HOM05D006002 ORTHO05D007651 8.5e-68 261.5 215 61.4
Eucgr.F01438 Eucalyptus grandis HOM05D006002 ORTHO05D007651 1.4e-67 260.8 221 62.0
Lsat_1_v5_gn_7_116060 Lactuca sativa HOM05D006002 ORTHO05D007651 1.9e-67 260.4 210 63.3
FvH4_3g16091 Fragaria vesca HOM05D006002 ORTHO05D007651 2.5e-67 260.0 190 66.3
FAN11G0453 Fragaria x ananassa HOM05D006002 ORTHO05D007651 2.5e-67 260.0 190 66.8
VMungo1080G0998 Vigna mungo HOM05D001395 ORTHO05D002039 4.2e-67 259.2 239 55.2
CDE02G2905 Ceratophyllum demersum HOM05D006002 ORTHO05D007651 5.5e-67 258.8 199 60.8
Nitab4.5_0000294g0110 Nicotiana tabacum HOM05D006002 ORTHO05D007651 5.5e-67 258.8 218 62.8
Solyc07g066280.3 Solanum lycopersicum HOM05D006002 ORTHO05D007651 5.5e-67 258.8 213 62.4
MELO3C010553.2 Cucumis melo HOM05D006002 ORTHO05D007651 9.3e-67 258.1 219 59.8
FAN16G0275 Fragaria x ananassa HOM05D006002 ORTHO05D007651 9.3e-67 258.1 194 66.5
Phvul.005G050900 Phaseolus vulgaris HOM05D006002 ORTHO05D007651 1.2e-66 257.7 225 57.8
RcHm_v2.0_Chr5g0027061 Rosa chinensis HOM05D006002 ORTHO05D007651 2.1e-66 256.9 216 63.0
CARHR278060 Cardamine hirsuta HOM05D006002 ORTHO05D007651 4.6e-66 255.8 241 57.7
Cc05_g15870 Coffea canephora HOM05D006002 ORTHO05D007651 6.1e-66 255.4 210 62.4
Glyma.08G167200 Glycine max HOM05D006002 ORTHO05D007651 6.1e-66 255.4 216 59.3
CAN.G943.23 Capsicum annuum HOM05D006002 ORTHO05D007651 1.8e-65 253.8 226 59.3
ClCG11G016270 Citrullus lanatus HOM05D006002 ORTHO05D007651 2.3e-65 253.4 223 59.6
PSO675G3741 Papaver somniferum HOM05D006002 ORTHO05D007651 2.3e-65 253.4 214 56.1
QL03p043202 Quercus lobata HOM05D006002 ORTHO05D007651 3.0e-65 253.1 166 72.3
COL.COLO4_25103 Corchorus olitorius HOM05D006002 ORTHO05D007651 5.1e-65 252.3 232 60.3
Peaxi162Scf00232g00102 Petunia axillaris HOM05D006002 ORTHO05D007651 5.1e-65 252.3 255 54.1
FAN25G3512 Fragaria x ananassa HOM05D006002 ORTHO05D007651 8.7e-65 251.5 190 64.7
Nitab4.5_0001235g0050 Nicotiana tabacum HOM05D006002 ORTHO05D007651 1.1e-64 251.1 195 64.6
Aqoxy1G01586 Aquilegia oxysepala HOM05D006002 ORTHO05D007651 7.4e-64 248.4 222 55.9
Ah.04g163380 Amaranthus hybridus HOM05D006002 ORTHO05D007651 1.3e-63 247.7 219 59.8
Eucgr.F01442 Eucalyptus grandis HOM05D006002 ORTHO05D007651 2.2e-63 246.9 194 62.4
Sed0002243 Sechium edule HOM05D006002 ORTHO05D007651 2.2e-63 246.9 222 59.0
AT5G64150 Arabidopsis thaliana HOM05D006002 ORTHO05D007651 2.8e-63 246.5 253 55.7
PSO541G1619 Papaver somniferum HOM05D006002 ORTHO05D007651 2.8e-63 246.5 214 56.1
MBI02_g43301_MAGBIO Magnolia biondii HOM05D006002 ORTHO05D007651 6.3e-63 245.4 240 53.3
Migut.M01570 Erythranthe guttata HOM05D006002 ORTHO05D007651 8.2e-63 245.0 211 58.8
EL10Ac4g08518 Beta vulgaris HOM05D006002 ORTHO05D007651 1.4e-62 244.2 225 56.0
SalBow8G1862 Salvia bowleyana HOM05D006002 ORTHO05D007651 1.4e-62 244.2 219 57.1
AL8G41420 Arabidopsis lyrata HOM05D006002 ORTHO05D007651 1.8e-62 243.8 245 56.3
BraA06t26026Z Brassica rapa HOM05D006002 ORTHO05D007651 1.8e-62 243.8 220 57.7
CSS0008604 Camellia sinensis var. sinensis HOM05D006002 ORTHO05D007651 1.8e-62 243.8 244 55.3
A06p30870 Brassica napus HOM05D006002 ORTHO05D007651 5.3e-62 242.3 220 56.8
Actinidia35439 Actinidia chinensis HOM05D006002 ORTHO05D007651 1.2e-61 241.1 229 60.3
Aa31LG1G17780 Aethionema arabicum HOM05D006002 ORTHO05D007651 1.2e-61 241.1 243 53.5
HanXRQChr11g0335201 Helianthus annuus HOM05D006002 ORTHO05D007651 2.0e-61 240.4 210 58.6
MSTRG.16122 Avicennia marina HOM05D006002 ORTHO05D007651 2.6e-61 240.0 250 54.0
BcaC01g02672 Brassica carinata HOM05D006002 ORTHO05D007651 7.7e-61 238.4 219 58.0
PGR083G2675 Punica granatum HOM05D006002 ORTHO05D007651 7.7e-61 238.4 222 57.2
BolC3t18471H Brassica oleracea HOM05D006002 ORTHO05D007651 1.0e-60 238.0 219 58.0
C03p62100 Brassica napus HOM05D006002 ORTHO05D007651 1.3e-60 237.7 207 59.9
BcaB02g09782 Brassica carinata HOM05D006002 ORTHO05D007651 1.7e-60 237.3 227 54.2
Thhalv10004403m.g Eutrema salsugineum HOM05D006002 ORTHO05D007651 2.9e-60 236.5 243 53.9
CiPaw.11G062100 Carya illinoinensis HOM05D006002 ORTHO05D007651 3.8e-60 236.1 211 58.3
Sc03g0007860 Simmondsia chinensis HOM05D006002 ORTHO05D007651 3.8e-60 236.1 213 57.3
SGA_v2.0_scaffold7G03564 Striga asiatica HOM05D006002 ORTHO05D007651 6.5e-60 235.3 233 53.2
Carub.0008s2494 Capsella rubella HOM05D006002 ORTHO05D007651 8.5e-60 235.0 192 62.0
unitig_748.g7639 Utricularia gibba HOM05D006002 ORTHO05D007651 3.2e-59 233.0 228 53.1
Gohir.A05G076100 Gossypium hirsutum HOM05D006002 ORTHO05D007651 2.7e-58 229.9 230 55.2
Lj8A185G55 Lonicera japonica HOM05D006002 ORTHO05D007651 3.6e-58 229.6 195 63.1
SEGI_37419 Sequoiadendron giganteum HOM05D006002 ORTHO05D007651 3.6e-58 229.6 229 50.2
Sp2g27210 Schrenkiella parvula HOM05D006002 ORTHO05D007651 4.6e-58 229.2 281 48.8
Gorai.009G080200 Gossypium raimondii HOM05D006002 ORTHO05D007651 5.1e-57 225.7 230 54.3
Gohir.D05G078800 Gossypium hirsutum HOM05D006002 ORTHO05D007651 6.7e-57 225.3 205 58.0
Duzib168G0541 Durio zibethinus HOM05D006002 ORTHO05D007651 2.6e-56 223.4 230 55.7
Thecc.03G324000 Theobroma cacao HOM05D006002 ORTHO05D007651 1.2e-53 214.5 234 53.0
MBI02_g20986_MAGBIO Magnolia biondii HOM05D006002 ORTHO05D007651 2.0e-53 213.8 240 49.6
TPR.G18376 Trifolium pratense HOM05D006002 ORTHO05D007651 2.0e-53 213.8 155 65.2
Lalb_Chr25g0284701 Lupinus albus HOM05D006002 ORTHO05D007651 4.5e-53 212.6 153 62.1
ECA236G2913 Erigeron canadensis HOM05D006002 ORTHO05D007651 1.0e-52 211.5 208 53.4
QL04p088694 Quercus lobata HOM05D006002 ORTHO05D007651 5.7e-48 195.7 166 60.8
HPP92_001894 Vanilla planifolia HOM05D006002 ORTHO05D004222 6.3e-47 192.2 206 51.5
GSVIVG01020461001 Vitis vinifera HOM05D006002 ORTHO05D007651 1.1e-46 191.4 207 52.2
Gohir.1Z049302 Gossypium hirsutum HOM05D006002 ORTHO05D007651 4.1e-46 189.5 201 52.7
QL04p062372 Quercus lobata HOM05D006002 ORTHO05D007651 1.9e-43 180.6 124 70.2
Potri.018G000850 Populus trichocarpa HOM05D006002 ORTHO05D007651 6.1e-42 175.6 189 52.4
ATR0165G036 Amborella trichopoda HOM05D006002 ORTHO05D007651 1.4e-41 174.5 133 63.2
SMO145G0236 Selaginella moellendorffii HOM05D006002 ORTHO05D007651 6.7e-41 172.2 202 45.5
AagrBONN_evm.TU.Sc2ySwM_344.4971 Anthoceros agrestis HOM05D006002 ORTHO05D007651 3.3e-40 169.9 195 46.7
MD05G1214000 Malus domestica HOM05D006002 ORTHO05D007651 1.2e-37 161.4 159 54.1
MD05G1214300 Malus domestica HOM05D006002 ORTHO05D007651 3.2e-35 153.3 103 73.8
Pp3c1_22930 Physcomitrium patens HOM05D006002 ORTHO05D007651 5.5e-35 152.5 333 31.5
Os12g0612500 Oryza sativa ssp. japonica HOM05D006002 ORTHO05D007651 1.2e-34 151.4 227 43.2
AUR62041934 Chenopodium quinoa HOM05D006002 ORTHO05D007651 4.7e-34 149.4 221 44.3
Dinv42524 Davidia involucrata HOM05D006002 ORTHO05D007651 2.3e-33 147.1 292 39.7
Potri.001G003632 Populus trichocarpa HOM05D006002 ORTHO05D007651 3.0e-33 146.7 148 58.1
AUR62035491 Chenopodium quinoa HOM05D006002 ORTHO05D007651 5.2e-33 146.0 221 43.0
Mapoly0051s0043 Marchantia polymorpha HOM05D006002 ORTHO05D007651 1.2e-32 144.8 307 31.9
BcaB04g17517 Brassica carinata HOM05D006002 ORTHO05D007651 1.2e-26 124.8 77 72.7
CBR_g8978 Chara braunii HOM05D006002 ORTHO05D007651 2.8e-26 123.6 117 53.0
TPR.G32276 Trifolium pratense HOM05D006002 ORTHO05D007651 2.6e-24 117.1 88 62.5
PRCOL_00003514 Prasinoderma coloniale HOM05D006002 ORTHO05D007651 3.5e-21 106.7 185 39.5
MCO01G477 Micromonas commoda HOM05D006002 ORTHO05D007651 1.2e-18 98.2 236 32.2
Cre07.g337516 Chlamydomonas reinhardtii HOM05D006002 ORTHO05D007651 1.8e-17 94.4 116 47.4
CAN.G42.13 Capsicum annuum HOM05D006002 ORTHO05D007651 5.8e-08 62.8 70 48.6


User provided reference genes

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