Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc42.74 Carica papaya HOM05D005104 ORTHO05D006614 1.2e-138 496.5 252 100.0
Manes.14G166400 Manihot esculenta HOM05D005104 ORTHO05D006614 3.9e-73 278.9 255 62.7
Eucgr.I02668 Eucalyptus grandis HOM05D005104 ORTHO05D006614 2.0e-69 266.5 255 59.6
Duzib248G0158 Durio zibethinus HOM05D005104 ORTHO05D006614 2.6e-69 266.2 258 62.0
PGR142G2776 Punica granatum HOM05D005104 ORTHO05D006614 6.5e-68 261.5 258 59.7
Phvul.002G208000 Phaseolus vulgaris HOM05D005104 ORTHO05D006614 2.5e-67 259.6 259 57.5
Dinv24198 Davidia involucrata HOM05D005104 ORTHO05D006614 4.2e-67 258.8 263 61.6
VMungo0251G0802 Vigna mungo HOM05D005104 ORTHO05D006614 4.2e-67 258.8 262 58.8
Medtr4g094252 Medicago truncatula HOM05D005104 ORTHO05D006614 9.4e-67 257.7 256 57.4
Psat7g098720 Pisum sativum HOM05D005104 ORTHO05D006614 1.4e-65 253.8 256 60.2
Thecc.02G140100 Theobroma cacao HOM05D005104 ORTHO05D006614 3.9e-65 252.3 260 58.5
Haze_10684 Corylus avellana HOM05D005104 ORTHO05D006614 1.5e-64 250.4 255 59.6
Actinidia28058 Actinidia chinensis HOM05D005104 ORTHO05D006614 2.0e-64 250.0 263 59.3
TAR628G1132 Trochodendron aralioides HOM05D005104 ORTHO05D006614 2.6e-64 249.6 259 57.5
Lj4g0020611 Lotus japonicus HOM05D005104 ORTHO05D006614 3.3e-64 249.2 254 57.1
CiPaw.05G036500 Carya illinoinensis HOM05D005104 ORTHO05D006614 4.4e-64 248.8 259 59.5
Gohir.A04G113100 Gossypium hirsutum HOM05D005104 ORTHO05D006614 9.7e-64 247.7 260 58.5
Ciclev10029197m.g Citrus clementina HOM05D005104 ORTHO05D006614 1.7e-63 246.9 252 59.5
Gohir.D04G154400 Gossypium hirsutum HOM05D005104 ORTHO05D006614 1.7e-63 246.9 258 58.9
Gorai.012G141700 Gossypium raimondii HOM05D005104 ORTHO05D006614 1.7e-63 246.9 258 58.9
MELO3C018651.2 Cucumis melo HOM05D005104 ORTHO05D006614 2.2e-63 246.5 260 59.2
CsaV3_7G006430 Cucumis sativus L. HOM05D005104 ORTHO05D006614 8.2e-63 244.6 265 58.5
Lalb_Chr10g0097741 Lupinus albus HOM05D005104 ORTHO05D006614 8.2e-63 244.6 260 58.5
Sed0008592 Sechium edule HOM05D005104 ORTHO05D006614 4.1e-62 242.3 257 59.1
arahy.Tifrunner.gnm1.ann1.V9NXIE Arachis hypogaea HOM05D005104 ORTHO05D006614 5.3e-62 241.9 259 58.3
GSVIVG01003083001 Vitis vinifera HOM05D005104 ORTHO05D006614 7.0e-62 241.5 261 56.3
Cfa005608 Carpinus fangiana HOM05D005104 ORTHO05D006614 9.1e-62 241.1 260 59.2
Atru.chr6.1089 Acer truncatum HOM05D005104 ORTHO05D006614 2.6e-61 239.6 253 59.7
Atru.chr6.1109 Acer truncatum HOM05D005104 ORTHO05D006614 2.6e-61 239.6 253 59.7
Gohir.A04G112960 Gossypium hirsutum HOM05D005104 ORTHO05D006614 3.5e-61 239.2 215 62.8
arahy.Tifrunner.gnm1.ann1.PH7E5N Arachis hypogaea HOM05D005104 ORTHO05D006614 5.9e-61 238.4 259 57.5
Prupe.8G062400 Prunus persica HOM05D005104 ORTHO05D006614 1.0e-60 237.7 257 56.8
COL.COLO4_20953 Corchorus olitorius HOM05D005104 ORTHO05D006614 3.8e-60 235.7 261 57.5
Glyma.05G118400 Glycine max HOM05D005104 ORTHO05D006614 3.8e-60 235.7 258 56.6
Aqoxy6G00597 Aquilegia oxysepala HOM05D005104 ORTHO05D006614 1.1e-59 234.2 207 64.3
CSS0037720 Camellia sinensis var. sinensis HOM05D005104 ORTHO05D006614 2.5e-59 233.0 262 55.3
ClCG09G015340 Citrullus lanatus HOM05D005104 ORTHO05D006614 4.2e-59 232.3 282 53.9
Ca_18345_v3 Cicer arietinum L. HOM05D005104 ORTHO05D006614 5.5e-59 231.9 280 54.6
Glyma.08G073500 Glycine max HOM05D005104 ORTHO05D006614 9.4e-59 231.1 261 56.7
TPR.G10460 Trifolium pratense HOM05D005104 ORTHO05D006614 1.6e-58 230.3 223 61.4
RcHm_v2.0_Chr6g0273461 Rosa chinensis HOM05D005104 ORTHO05D006614 2.7e-58 229.6 256 55.1
DCAR_001791 Daucus carota HOM05D005104 ORTHO05D006614 1.0e-57 227.6 265 56.2
MD10G1051500 Malus domestica HOM05D005104 ORTHO05D006614 1.0e-57 227.6 256 55.9
MSTRG.27791 Avicennia marina HOM05D005104 ORTHO05D006614 2.3e-57 226.5 259 53.7
Hma1.2p1_0522F.1_g171600 Hydrangea macrophylla HOM05D005104 ORTHO05D006614 2.3e-57 226.5 207 63.3
PSO781G0266 Papaver somniferum HOM05D005104 ORTHO05D006614 3.9e-57 225.7 264 55.3
CANSAT11G2657 Cannabis sativa HOM05D005104 ORTHO05D006614 5.2e-57 225.3 274 53.3
TWI59G0245 Tripterygium wilfordii HOM05D005104 ORTHO05D006614 5.2e-57 225.3 255 55.3
Oeu007957.1 Olea europaea HOM05D005104 ORTHO05D006614 1.5e-56 223.8 260 55.4
Thhalv10004872m.g Eutrema salsugineum HOM05D005104 ORTHO05D006614 2.0e-56 223.4 253 53.4
Nn1g05321 Nelumbo nucifera HOM05D005104 ORTHO05D006614 2.6e-56 223.0 259 54.8
FAN27G3119 Fragaria x ananassa HOM05D005104 ORTHO05D006614 4.4e-56 222.2 252 54.4
HanXRQChr10g0295831 Helianthus annuus HOM05D005104 ORTHO05D006614 7.4e-56 221.5 261 54.0
CDE10G0587 Ceratophyllum demersum HOM05D005104 ORTHO05D006614 9.7e-56 221.1 257 51.4
Sp2g27220 Schrenkiella parvula HOM05D005104 ORTHO05D006614 9.7e-56 221.1 253 54.2
BcaB07g29727 Brassica carinata HOM05D005104 ORTHO05D006614 1.3e-55 220.7 255 52.9
FvH4_2g12710 Fragaria vesca HOM05D005104 ORTHO05D006614 1.3e-55 220.7 253 53.8
PSO541G4381 Papaver somniferum HOM05D005104 ORTHO05D006614 1.7e-55 220.3 264 54.5
AL8G41430 Arabidopsis lyrata HOM05D005104 ORTHO05D006614 2.2e-55 219.9 253 53.8
CARHR278070 Cardamine hirsuta HOM05D005104 ORTHO05D006614 2.2e-55 219.9 255 54.1
Carub.0008s2495 Capsella rubella HOM05D005104 ORTHO05D006614 3.7e-55 219.2 255 52.9
AT5G64160 Arabidopsis thaliana HOM05D005104 ORTHO05D006614 6.3e-55 218.4 255 52.5
QL11p020542 Quercus lobata HOM05D005104 ORTHO05D006614 6.3e-55 218.4 282 50.4
SalBow6G6009 Salvia bowleyana HOM05D005104 ORTHO05D006614 1.8e-54 216.9 258 54.3
Rhsim05G0108500 Rhododendron simsii HOM05D005104 ORTHO05D006614 3.1e-54 216.1 178 66.3
SalBow6G6298 Salvia bowleyana HOM05D005104 ORTHO05D006614 5.3e-54 215.3 258 54.3
HPP92_006000 Vanilla planifolia HOM05D005104 ORTHO05D006614 5.3e-54 215.3 257 52.1
BcaB02g09781 Brassica carinata HOM05D005104 ORTHO05D006614 7.0e-54 214.9 255 52.9
FAN20G1981 Fragaria x ananassa HOM05D005104 ORTHO05D006614 7.0e-54 214.9 253 53.4
vmacro19925 Vaccinium macrocarpon HOM05D005104 ORTHO05D006614 1.2e-53 214.2 305 50.2
Aa31LG1G17770 Aethionema arabicum HOM05D005104 ORTHO05D006614 1.6e-53 213.8 261 52.1
Migut.N01063 Erythranthe guttata HOM05D005104 ORTHO05D006614 2.0e-53 213.4 255 52.5
ATR0564G397 Amborella trichopoda HOM05D005104 ORTHO05D006614 4.5e-53 212.2 256 52.3
SGA_v2.0_scaffold45G17311 Striga asiatica HOM05D005104 ORTHO05D006614 7.7e-53 211.5 260 51.9
A06p30880 Brassica napus HOM05D005104 ORTHO05D006614 1.7e-52 210.3 255 52.9
BcaC01g02673 Brassica carinata HOM05D005104 ORTHO05D006614 6.5e-52 208.4 255 52.2
Sabra01G0157800 Salix brachista HOM05D005104 ORTHO05D006614 6.5e-52 208.4 287 50.2
BolC3t18470H Brassica oleracea HOM05D005104 ORTHO05D006614 1.1e-51 207.6 255 52.2
C03p62090 Brassica napus HOM05D005104 ORTHO05D006614 1.5e-51 207.2 255 52.2
Potri.003G023601 Populus trichocarpa HOM05D005104 ORTHO05D006614 3.2e-51 206.1 271 50.2
SEGI_35517 Sequoiadendron giganteum HOM05D005104 ORTHO05D006614 3.2e-51 206.1 264 50.8
ECA234G0341 Erigeron canadensis HOM05D005104 ORTHO05D006614 1.8e-49 200.3 211 56.9
Lsat_1_v5_gn_5_107140 Lactuca sativa HOM05D005104 ORTHO05D006614 2.3e-49 199.9 267 49.8
BcaC02g09479 Brassica carinata HOM05D002012 ORTHO05D001992 4.0e-49 199.1 228 51.8
Sopen10g017460 Solanum pennellii HOM05D005104 ORTHO05D006614 1.5e-48 197.2 257 49.0
PGSC0003DMG400017693 Solanum tuberosum HOM05D005104 ORTHO05D006614 4.4e-48 195.7 259 49.4
Hund06391 Selenicereus undatus HOM05D005104 ORTHO05D006614 1.3e-47 194.1 255 51.8
C09p58390 Brassica napus HOM05D005104 ORTHO05D006614 6.3e-47 191.8 230 49.1
C09p58340 Brassica napus HOM05D005104 ORTHO05D006614 8.3e-47 191.4 230 49.1
BolC9t58698H Brassica oleracea HOM05D005104 ORTHO05D006614 8.3e-47 191.4 230 49.1
Solyc10g047220.2 Solanum lycopersicum HOM05D005104 ORTHO05D006614 5.3e-46 188.7 257 47.9
Oeu026158.1 Olea europaea HOM05D005104 ORTHO05D006614 1.6e-45 187.2 253 47.8
MBI02_g08741_MAGBIO Magnolia biondii HOM05D005104 ORTHO05D006614 3.5e-45 186.0 135 70.4
C06p26800 Brassica napus HOM05D005104 ORTHO05D006614 1.0e-44 184.5 230 48.3
BolC6t37855H Brassica oleracea HOM05D005104 ORTHO05D006614 1.0e-44 184.5 230 48.3
GSVIVG01003087001 Vitis vinifera HOM05D005104 ORTHO05D006614 2.9e-44 183.0 138 71.7
GSVIVG01013334001 Vitis vinifera HOM05D005104 ORTHO05D006614 2.9e-44 183.0 138 71.7
Peaxi162Scf00003g03543 Petunia axillaris HOM05D005104 ORTHO05D006614 1.5e-43 180.6 256 47.3
FAN24G3378 Fragaria x ananassa HOM05D005104 ORTHO05D006614 1.9e-43 180.3 134 70.9
Cc02_g21630 Coffea canephora HOM05D005104 ORTHO05D006614 3.2e-43 179.5 252 51.2
Lj5A240T40 Lonicera japonica HOM05D005104 ORTHO05D006614 3.2e-43 179.5 136 73.5
BcaC08g45071 Brassica carinata HOM05D005104 ORTHO05D006614 4.2e-43 179.1 235 46.8
AUR62010117 Chenopodium quinoa HOM05D005104 ORTHO05D006614 9.4e-43 177.9 253 45.8
Os02g0753200 Oryza sativa ssp. japonica HOM05D005104 ORTHO05D006614 3.6e-42 176.0 268 45.5
C02p46090 Brassica napus HOM05D005104 ORTHO05D006614 8.0e-42 174.9 252 46.4
AUR62013112 Chenopodium quinoa HOM05D005104 ORTHO05D006614 1.4e-41 174.1 253 45.8
BraA03t13815Z Brassica rapa HOM05D005104 ORTHO05D006614 6.8e-41 171.8 229 45.4
Hma1.2p1_0522F.1_g171590 Hydrangea macrophylla HOM05D005104 ORTHO05D006614 7.5e-40 168.3 219 53.0
Zm00001eb255190 Zea mays HOM05D005104 ORTHO05D006614 4.1e-38 162.5 264 43.6
Ah.01g009520 Amaranthus hybridus HOM05D005104 ORTHO05D006614 1.6e-37 160.6 253 43.9
GSVIVG01003093001 Vitis vinifera HOM05D005104 ORTHO05D006614 3.8e-36 156.0 118 72.0
Zm00001eb194200 Zea mays HOM05D005104 ORTHO05D006614 5.0e-36 155.6 197 48.7
Mapoly0096s0033 Marchantia polymorpha HOM05D005104 ORTHO05D006614 3.7e-31 139.4 271 41.0
Sc08g0003350 Simmondsia chinensis HOM05D005104 ORTHO05D006614 3.7e-31 139.4 135 57.0
Pp3c18_21190 Physcomitrium patens HOM05D005104 ORTHO05D006614 3.2e-30 136.3 258 40.3
AagrBONN_evm.TU.Sc2ySwM_117.984 Anthoceros agrestis HOM05D005104 ORTHO05D006614 1.6e-29 134.0 256 39.5
THA.LOC104818435 Tarenaya hassleriana HOM05D005104 ORTHO05D006614 1.5e-27 127.5 183 49.2
SMO117G0229 Selaginella moellendorffii HOM05D005104 ORTHO05D006614 9.5e-27 124.8 200 43.5
CDE10G1356 Ceratophyllum demersum HOM05D005104 ORTHO05D006614 1.9e-22 110.5 183 42.6
Nitab4.5_0000078g0030 Nicotiana tabacum HOM05D005104 ORTHO05D006614 3.2e-22 109.8 269 38.7
BolC4t25904H Brassica oleracea HOM05D005104 ORTHO05D006614 1.0e-20 104.8 73 68.5
unitig_22.g6836 Utricularia gibba HOM05D001058 ORTHO05D000911 1.7e-20 104.0 205 43.4
EL10Ac9g21466 Beta vulgaris HOM05D005104 ORTHO05D006614 1.9e-19 100.5 74 67.6
CBR_g47116 Chara braunii HOM05D005104 ORTHO05D006614 9.8e-16 88.2 236 33.1
CAN.G1.36 Capsicum annuum HOM05D005104 ORTHO05D006614 6.4e-15 85.5 187 40.6
Duzib132G1169 Durio zibethinus HOM05D005104 ORTHO05D006614 6.0e-13 79.0 147 42.9
A02p26040 Brassica napus HOM05D005104 ORTHO05D006614 1.1e-11 74.7 97 44.3
Nitab4.5_0005015g0050 Nicotiana tabacum HOM05D005104 ORTHO05D006614 1.1e-11 74.7 154 40.9
Hma1.2p1_0516F.1_g170490 Hydrangea macrophylla HOM05D005104 ORTHO05D006614 1.5e-08 64.3 138 39.9
C07p45690 Brassica napus HOM05D005104 ORTHO05D021970 4.4e-08 62.8 131 37.4
C05p26840 Brassica napus HOM05D005104 ORTHO05D006614 9.9e-08 61.6 131 36.6
BolC6t38485H Brassica oleracea HOM05D005104 ORTHO05D006614 1.7e-07 60.8 137 38.0
Potri.001G206032 Populus trichocarpa HOM05D005104 ORTHO05D006614 3.7e-07 59.7 192 35.9
C09p03790 Brassica napus HOM05D005104 ORTHO05D006614 4.9e-07 59.3 131 35.9
C03p52730 Brassica napus HOM05D005104 ORTHO05D021970 7.1e-06 55.5 134 35.1


User provided reference genes

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