Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc414.2 Carica papaya HOM05D005796 ORTHO05D007054 3.3e-130 468.4 236 100.0
Duzib084G0674 Durio zibethinus HOM05D005796 ORTHO05D007054 4.1e-80 302.0 191 78.5
Thecc.03G078500 Theobroma cacao HOM05D005796 ORTHO05D007054 7.7e-79 297.7 191 78.5
TWI60G1143 Tripterygium wilfordii HOM05D005796 ORTHO05D007054 1.3e-78 297.0 180 81.7
Manes.14G074300 Manihot esculenta HOM05D005796 ORTHO05D007054 2.2e-78 296.2 193 76.7
Ciclev10021819m.g Citrus clementina HOM05D005796 ORTHO05D007054 2.5e-77 292.7 205 72.7
Atru.chr9.2321 Acer truncatum HOM05D005796 ORTHO05D007054 5.5e-77 291.6 182 79.7
Dinv38663 Davidia involucrata HOM05D005796 ORTHO05D007054 3.0e-75 285.8 186 75.8
Gohir.A07G065400 Gossypium hirsutum HOM05D005796 ORTHO05D007054 3.9e-75 285.4 221 70.1
Gorai.001G073800 Gossypium raimondii HOM05D005796 ORTHO05D007054 6.7e-75 284.6 221 70.1
GSVIVG01008066001 Vitis vinifera HOM05D005796 ORTHO05D007054 6.7e-75 284.6 206 70.4
CANSAT80G0862 Cannabis sativa HOM05D005796 ORTHO05D007054 1.1e-74 283.9 225 67.6
Prupe.5G185800 Prunus persica HOM05D005796 ORTHO05D007054 1.1e-74 283.9 189 76.7
SGA_v2.0_scaffold7G04086 Striga asiatica HOM05D005796 ORTHO05D007054 1.1e-74 283.9 191 75.4
Aa31LG11G960 Aethionema arabicum HOM05D005796 ORTHO05D007054 3.3e-74 282.3 202 70.3
Hma1.2p1_0002F.1_g003270 Hydrangea macrophylla HOM05D005796 ORTHO05D007054 7.4e-74 281.2 255 57.6
Potri.015G065500 Populus trichocarpa HOM05D005796 ORTHO05D007054 7.4e-74 281.2 178 79.2
TAR481G0014 Trochodendron aralioides HOM05D005796 ORTHO05D007054 7.4e-74 281.2 243 62.6
CiPaw.11G037800 Carya illinoinensis HOM05D005796 ORTHO05D007054 1.7e-73 280.0 188 75.5
Sc12g0006170 Simmondsia chinensis HOM05D005796 ORTHO05D007054 4.1e-72 275.4 225 64.4
Hund02671 Selenicereus undatus HOM05D005796 ORTHO05D007054 1.2e-71 273.9 185 73.0
Actinidia04922 Actinidia chinensis HOM05D005796 ORTHO05D007054 2.6e-71 272.7 181 73.5
Migut.D01857 Erythranthe guttata HOM05D005796 ORTHO05D007054 3.4e-71 272.3 177 74.6
Peaxi162Scf00009g00426 Petunia axillaris HOM05D005796 ORTHO05D007054 4.5e-71 271.9 191 71.2
Carub.0008s2345 Capsella rubella HOM05D005796 ORTHO05D007054 5.9e-71 271.6 229 60.7
MD14G1193900 Malus domestica HOM05D005796 ORTHO05D007054 1.0e-70 270.8 193 71.5
RcHm_v2.0_Chr7g0180561 Rosa chinensis HOM05D005796 ORTHO05D007054 1.0e-70 270.8 176 75.0
BcaB02g09686 Brassica carinata HOM05D005796 ORTHO05D007054 1.3e-70 270.4 207 65.2
AUR62008352 Chenopodium quinoa HOM05D005796 ORTHO05D007054 1.7e-70 270.0 188 69.1
THA.LOC104821456 Tarenaya hassleriana HOM05D005796 ORTHO05D007054 1.7e-70 270.0 191 71.7
CARHR276510 Cardamine hirsuta HOM05D005796 ORTHO05D007054 2.2e-70 269.6 194 68.6
FAN13G2643 Fragaria x ananassa HOM05D005796 ORTHO05D007054 2.2e-70 269.6 243 59.7
A09p07830 Brassica napus HOM05D005796 ORTHO05D007054 2.9e-70 269.2 189 71.4
BraA09t36434Z Brassica rapa HOM05D005796 ORTHO05D007054 2.9e-70 269.2 189 71.4
Cc04_g15610 Coffea canephora HOM05D005796 ORTHO05D007054 2.9e-70 269.2 178 74.2
AL8G39690 Arabidopsis lyrata HOM05D005796 ORTHO05D007054 3.8e-70 268.9 223 61.9
AT5G62720 Arabidopsis thaliana HOM05D005796 ORTHO05D007054 3.8e-70 268.9 223 61.0
HanXRQChr02g0045201 Helianthus annuus HOM05D005796 ORTHO05D007054 3.8e-70 268.9 187 71.1
MD06G1187500 Malus domestica HOM05D005796 ORTHO05D007054 3.8e-70 268.9 218 66.5
Nitab4.5_0004605g0110 Nicotiana tabacum HOM05D005796 ORTHO05D007054 5.0e-70 268.5 190 71.6
MSTRG.4407 Avicennia marina HOM05D005796 ORTHO05D007054 6.5e-70 268.1 176 73.3
BcaC04g23395 Brassica carinata HOM05D005796 ORTHO05D007054 6.5e-70 268.1 193 71.0
Carub.0005s1409 Capsella rubella HOM05D005796 ORTHO05D007054 1.1e-69 267.3 198 68.2
Eucgr.B00422 Eucalyptus grandis HOM05D005796 ORTHO05D007054 1.1e-69 267.3 162 81.5
arahy.Tifrunner.gnm1.ann1.U2VSD4 Arachis hypogaea HOM05D005796 ORTHO05D007054 2.5e-69 266.2 193 70.5
Lalb_Chr13g0303431 Lupinus albus HOM05D005796 ORTHO05D007054 2.5e-69 266.2 217 63.6
Solyc03g113280.3 Solanum lycopersicum HOM05D005796 ORTHO05D007054 3.2e-69 265.8 166 78.3
arahy.Tifrunner.gnm1.ann1.NXA9BP Arachis hypogaea HOM05D005796 ORTHO05D007054 4.2e-69 265.4 193 69.9
BcaC01g02511 Brassica carinata HOM05D005796 ORTHO05D007054 4.2e-69 265.4 204 66.2
BolC3t18656H Brassica oleracea HOM05D005796 ORTHO05D007054 4.2e-69 265.4 204 66.2
Nitab4.5_0005402g0010 Nicotiana tabacum HOM05D005796 ORTHO05D007054 4.2e-69 265.4 190 69.5
AL5G27300 Arabidopsis lyrata HOM05D005796 ORTHO05D007054 7.2e-69 264.6 229 62.0
Thhalv10004798m.g Eutrema salsugineum HOM05D005796 ORTHO05D007054 7.2e-69 264.6 204 65.7
PSO017G2472 Papaver somniferum HOM05D005796 ORTHO05D007054 9.4e-69 264.2 165 78.2
BraA06t25896Z Brassica rapa HOM05D005796 ORTHO05D007054 1.2e-68 263.8 204 65.2
PGSC0003DMG400025332 Solanum tuberosum HOM05D005796 ORTHO05D007054 1.2e-68 263.8 166 78.3
Sopen03g032340 Solanum pennellii HOM05D005796 ORTHO05D007054 1.6e-68 263.5 188 72.3
ECA247G3495 Erigeron canadensis HOM05D005796 ORTHO05D007054 2.1e-68 263.1 176 71.6
PSO478G3339 Papaver somniferum HOM05D005796 ORTHO05D007054 2.1e-68 263.1 165 78.8
Sed0020047 Sechium edule HOM05D005796 ORTHO05D007054 2.1e-68 263.1 176 75.6
FAN08G2559 Fragaria x ananassa HOM05D005796 ORTHO05D007054 3.6e-68 262.3 259 58.3
EL10Ac5g10940 Beta vulgaris HOM05D005796 ORTHO05D007054 4.7e-68 261.9 191 69.6
BolC9t53794H Brassica oleracea HOM05D005796 ORTHO05D007054 4.7e-68 261.9 193 68.9
FAN18G3372 Fragaria x ananassa HOM05D005796 ORTHO05D007054 4.7e-68 261.9 263 55.5
Gohir.D07G069900 Gossypium hirsutum HOM05D005796 ORTHO05D007054 4.7e-68 261.9 221 67.0
CARHR156700 Cardamine hirsuta HOM05D005796 ORTHO05D007054 6.1e-68 261.5 207 65.7
Sp2g25890 Schrenkiella parvula HOM05D005796 ORTHO05D007054 6.1e-68 261.5 192 68.2
BcaB05g22893 Brassica carinata HOM05D005796 ORTHO05D007054 2.3e-67 259.6 210 65.2
ClCG01G014370 Citrullus lanatus HOM05D005796 ORTHO05D007054 3.9e-67 258.8 177 73.4
DCAR_026077 Daucus carota HOM05D005796 ORTHO05D007054 3.9e-67 258.8 242 61.2
unitig_899.g15402 Utricularia gibba HOM05D003955 ORTHO05D004684 5.1e-67 258.5 173 70.5
AT3G47980 Arabidopsis thaliana HOM05D005796 ORTHO05D007054 6.7e-67 258.1 200 67.0
Sabra15G0090700 Salix brachista HOM05D005796 ORTHO05D007054 1.1e-66 257.3 210 64.8
A01p25720 Brassica napus HOM05D005796 ORTHO05D007054 1.5e-66 256.9 210 64.3
Lsat_1_v5_gn_1_10700 Lactuca sativa HOM05D005796 ORTHO05D007054 1.5e-66 256.9 182 69.8
BraA01t02488Z Brassica rapa HOM05D005796 ORTHO05D007054 2.6e-66 256.1 210 64.3
FAN04G0326 Fragaria x ananassa HOM05D005796 ORTHO05D007054 2.6e-66 256.1 192 67.2
C01p32410 Brassica napus HOM05D005796 ORTHO05D007054 7.4e-66 254.6 210 63.8
BolC1t03180H Brassica oleracea HOM05D005796 ORTHO05D007054 7.4e-66 254.6 210 63.8
MELO3C002210.2 Cucumis melo HOM05D005796 ORTHO05D007054 7.4e-66 254.6 176 73.3
A06p19660 Brassica napus HOM05D005796 ORTHO05D007054 9.7e-66 254.2 198 67.2
Sp5g14000 Schrenkiella parvula HOM05D005796 ORTHO05D007054 9.7e-66 254.2 195 65.6
CsaV3_1G007940 Cucumis sativus L. HOM05D005796 ORTHO05D007054 1.7e-65 253.4 176 72.7
BraA06t25046Z Brassica rapa HOM05D005796 ORTHO05D007054 3.7e-65 252.3 198 66.7
Oeu048731.1 Olea europaea HOM05D005796 ORTHO05D007054 3.7e-65 252.3 211 63.0
ATR0665G316 Amborella trichopoda HOM05D005796 ORTHO05D007054 4.8e-65 251.9 241 54.8
VMungo1215G0702 Vigna mungo HOM05D005796 ORTHO05D007054 8.2e-65 251.1 177 68.4
Phvul.003G193000 Phaseolus vulgaris HOM05D005796 ORTHO05D007054 1.4e-64 250.4 177 67.2
Aqoxy3G00785 Aquilegia oxysepala HOM05D005796 ORTHO05D007054 2.4e-64 249.6 168 72.6
Glyma.17G096600 Glycine max HOM05D005796 ORTHO05D007054 3.1e-64 249.2 177 67.2
CDE02G2117 Ceratophyllum demersum HOM05D005796 ORTHO05D007054 4.1e-64 248.8 198 64.6
BcaNung01383 Brassica carinata HOM05D005796 ORTHO05D007054 2.0e-63 246.5 180 68.9
MBI03_g20464_MAGBIO Magnolia biondii HOM05D005796 ORTHO05D007054 1.3e-62 243.8 169 70.4
C03p64010 Brassica napus HOM05D000012 ORTHO05D002455 2.9e-62 242.7 192 65.1
unitig_0.g783 Utricularia gibba HOM05D005796 ORTHO05D007054 2.9e-62 242.7 171 69.0
BcaB02g09676 Brassica carinata HOM05D005796 ORTHO05D007054 3.8e-62 242.3 190 65.3
A06p29510 Brassica napus HOM05D000012 ORTHO05D002455 3.8e-62 242.3 192 64.6
TPR.G38380 Trifolium pratense HOM05D005796 ORTHO05D007054 8.5e-62 241.1 181 65.7
Ca_21851_v3 Cicer arietinum L. HOM05D005796 ORTHO05D007054 1.1e-61 240.7 180 66.1
Os03g0684700 Oryza sativa ssp. japonica HOM05D005796 ORTHO05D007054 1.1e-61 240.7 154 77.3
Lj4g0017253 Lotus japonicus HOM05D005796 ORTHO05D007054 2.7e-60 236.1 195 58.5
Medtr4g107630 Medicago truncatula HOM05D005796 ORTHO05D007054 6.7e-59 231.5 177 66.1
Haze_07383 Corylus avellana HOM05D005796 ORTHO05D007054 1.5e-58 230.3 229 55.5
SEGI_40570 Sequoiadendron giganteum HOM05D005796 ORTHO05D007054 3.7e-57 225.7 199 55.8
AUR62021745 Chenopodium quinoa HOM05D005796 ORTHO05D007054 6.3e-57 224.9 144 76.4
Zm00001eb217240 Zea mays HOM05D005796 ORTHO05D007054 1.1e-56 224.2 202 60.9
PGR083G2169 Punica granatum HOM05D005796 ORTHO05D007054 1.8e-56 223.4 154 71.4
vmacro19431 Vaccinium macrocarpon HOM05D005796 ORTHO05D007054 5.3e-56 221.9 190 61.1
Thhalv10010656m.g Eutrema salsugineum HOM05D005796 ORTHO05D007054 1.4e-51 207.2 193 59.1
C09p08810 Brassica napus HOM05D005796 ORTHO05D007054 1.3e-49 200.7 156 69.2
COL.COLO4_37386 Corchorus olitorius HOM05D005796 ORTHO05D007054 5.4e-48 195.3 126 77.8
PGR083G0992 Punica granatum HOM05D005796 ORTHO05D007054 5.9e-47 191.8 136 69.9
Mapoly0029s0058 Marchantia polymorpha HOM05D005796 ORTHO05D007054 2.5e-45 186.4 157 54.1
BcaB01g00857 Brassica carinata HOM05D005796 ORTHO05D007054 1.2e-44 184.1 148 67.6
Aa31LG4G16620 Aethionema arabicum HOM05D005796 ORTHO05D007054 2.1e-44 183.3 153 62.7
SalBow7G0869 Salvia bowleyana HOM05D005796 ORTHO05D007054 2.1e-44 183.3 127 71.7
SMO356G0151 Selaginella moellendorffii HOM05D005796 ORTHO05D007054 3.0e-43 179.5 142 61.3
AagrBONN_evm.TU.Sc2ySwM_228.2536 Anthoceros agrestis HOM05D005796 ORTHO05D007054 4.0e-43 179.1 155 56.8
Lj9A459G48 Lonicera japonica HOM05D005796 ORTHO05D007054 8.8e-43 177.9 128 70.3
BcaNung07157 Brassica carinata HOM05D005796 ORTHO05D007054 1.2e-42 177.6 170 58.2
BcaC09g49836 Brassica carinata HOM05D005796 ORTHO05D007054 2.0e-42 176.8 160 60.6
QL10p015509 Quercus lobata HOM05D005796 ORTHO05D007054 2.5e-37 159.8 95 81.1
Zm00001eb053360 Zea mays HOM05D005796 ORTHO05D007054 3.0e-35 152.9 141 61.0
Sabra12G0050500 Salix brachista HOM05D005796 ORTHO05D007054 1.4e-32 144.1 147 57.1
CAN.G4519.1 Capsicum annuum HOM05D005796 ORTHO05D007054 4.3e-29 132.5 82 76.8
QL10p015507 Quercus lobata HOM05D005796 ORTHO05D007054 5.2e-27 125.6 88 70.5
FvH4_5g15530 Fragaria vesca HOM05D005796 ORTHO05D007054 1.7e-25 120.6 148 47.3
Sed0018874 Sechium edule HOM05D005796 ORTHO05D007054 1.0e-22 111.3 83 67.5
Nn4g23032 Nelumbo nucifera HOM05D005796 ORTHO05D007054 4.4e-18 95.9 123 43.9
MCO14G168 Micromonas commoda HOM05D005796 ORTHO05D007054 2.1e-12 77.0 161 29.2
Rhsim08G0160200 Rhododendron simsii HOM05D005796 ORTHO05D007054 8.9e-11 71.6 108 40.7
Glyma.05G030200 Glycine max HOM05D005796 ORTHO05D007054 1.2e-10 71.2 50 68.0
C09p08830 Brassica napus HOM05D005796 ORTHO05D007054 1.3e-09 67.8 37 75.7


User provided reference genes

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