Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc41.62 Carica papaya HOM05D000466 ORTHO05D120082 2.0e-32 141.7 68 100.0
THA.LOC104805246 Tarenaya hassleriana HOM05D000466 ORTHO05D000331 1.6e-08 62.4 66 45.5
AL1G24970 Arabidopsis lyrata HOM05D000466 ORTHO05D000331 2.0e-08 62.0 66 45.5
AT1G13260 Arabidopsis thaliana HOM05D000466 ORTHO05D000331 2.0e-08 62.0 66 45.5
Thhalv10010019m.g Eutrema salsugineum HOM05D000466 ORTHO05D000331 2.0e-08 62.0 66 45.5
Sp1g11770 Schrenkiella parvula HOM05D000466 ORTHO05D000331 2.0e-08 62.0 66 45.5
Aa31LG1G1410 Aethionema arabicum HOM05D000466 ORTHO05D000331 2.7e-08 61.6 66 43.9
Carub.0001s1299 Capsella rubella HOM05D000466 ORTHO05D000331 2.7e-08 61.6 66 43.9
Ah.03g137890 Amaranthus hybridus HOM05D000466 ORTHO05D000331 3.5e-08 61.2 66 45.5
EL10Ac6g14484 Beta vulgaris HOM05D000466 ORTHO05D000331 4.5e-08 60.8 66 43.9
BcaC05g25069 Brassica carinata HOM05D000466 ORTHO05D000331 4.5e-08 60.8 66 43.9
A06p08480 Brassica napus HOM05D000466 ORTHO05D000331 4.5e-08 60.8 66 43.9
C05p10070 Brassica napus HOM05D000466 ORTHO05D000331 4.5e-08 60.8 66 43.9
BolC5t29755H Brassica oleracea HOM05D000466 ORTHO05D000331 4.5e-08 60.8 66 43.9
BraA06t24044Z Brassica rapa HOM05D000466 ORTHO05D000331 4.5e-08 60.8 66 43.9
CARHR013640 Cardamine hirsuta HOM05D000466 ORTHO05D000331 4.5e-08 60.8 66 45.5
AUR62035279 Chenopodium quinoa HOM05D000466 ORTHO05D000331 5.9e-08 60.5 66 42.4
Sc11g0003130 Simmondsia chinensis HOM05D000466 ORTHO05D000331 5.9e-08 60.5 66 42.4
Sc04g0006680 Simmondsia chinensis HOM05D000466 ORTHO05D000331 7.7e-08 60.1 66 45.5
BcaC06g33961 Brassica carinata HOM05D000466 ORTHO05D000331 1.0e-07 59.7 66 43.9
C07p34610 Brassica napus HOM05D000466 ORTHO05D000331 1.0e-07 59.7 66 43.9
BolC7t43994H Brassica oleracea HOM05D000466 ORTHO05D000331 1.0e-07 59.7 66 43.9
CARHR146650 Cardamine hirsuta HOM05D000466 ORTHO05D000331 1.0e-07 59.7 66 43.9
TWI31G0981 Tripterygium wilfordii HOM05D000466 ORTHO05D000331 1.0e-07 59.7 66 43.9
AL5G14290 Arabidopsis lyrata HOM05D000466 ORTHO05D000331 1.3e-07 59.3 66 43.9
BcaB08g34285 Brassica carinata HOM05D000466 ORTHO05D000331 1.3e-07 59.3 66 42.4
BcaC07g41656 Brassica carinata HOM05D000466 ORTHO05D000331 1.3e-07 59.3 66 42.4
A09p63190 Brassica napus HOM05D000466 ORTHO05D000331 1.3e-07 59.3 66 42.4
C08p46640 Brassica napus HOM05D000466 ORTHO05D000331 1.3e-07 59.3 66 42.4
BolC8t52205H Brassica oleracea HOM05D000466 ORTHO05D000331 1.3e-07 59.3 66 42.4
BraA09t41671Z Brassica rapa HOM05D000466 ORTHO05D000331 1.3e-07 59.3 66 42.4
Manes.14G098000 Manihot esculenta HOM05D000466 ORTHO05D000331 1.3e-07 59.3 66 45.5
Sp2g14980 Schrenkiella parvula HOM05D000466 ORTHO05D000331 1.3e-07 59.3 66 45.5
TWI79G1296 Tripterygium wilfordii HOM05D000466 ORTHO05D000331 1.3e-07 59.3 66 42.4
BcaC06g31121 Brassica carinata HOM05D000466 ORTHO05D000331 1.7e-07 58.9 66 43.9
Thhalv10004508m.g Eutrema salsugineum HOM05D000466 ORTHO05D000331 1.7e-07 58.9 66 43.9
Solyc05g009790.1 Solanum lycopersicum HOM05D000466 ORTHO05D000331 2.3e-07 58.5 66 43.9
Ah.02g127100 Amaranthus hybridus HOM05D000466 ORTHO05D000331 2.9e-07 58.2 66 43.9
A06p42550 Brassica napus HOM05D001474 ORTHO05D000331 2.9e-07 58.2 66 42.4
BraA06t27170Z Brassica rapa HOM05D001474 ORTHO05D000331 2.9e-07 58.2 66 42.4
Carub.0005s0355 Capsella rubella HOM05D000466 ORTHO05D000331 2.9e-07 58.2 66 42.4
Nitab4.5_0000672g0020 Nicotiana tabacum HOM05D000466 ORTHO05D000331 2.9e-07 58.2 66 42.4
Nitab4.5_0008588g0010 Nicotiana tabacum HOM05D000466 ORTHO05D000331 2.9e-07 58.2 66 42.4
Sopen05g005620 Solanum pennellii HOM05D000466 ORTHO05D000331 2.9e-07 58.2 66 42.4
PGSC0003DMG400000811 Solanum tuberosum HOM05D000466 ORTHO05D000331 2.9e-07 58.2 66 42.4
THA.LOC104825711 Tarenaya hassleriana HOM05D000466 ORTHO05D000331 2.9e-07 58.2 66 42.4
CDE08G0038 Ceratophyllum demersum HOM05D002039 ORTHO05D005834 3.8e-07 57.8 66 43.9
Lj6P764T48 Lonicera japonica HOM05D000466 ORTHO05D000331 3.8e-07 57.8 66 45.5
Peaxi162Scf00380g00041 Petunia axillaris HOM05D000466 ORTHO05D000331 3.8e-07 57.8 66 42.4
RcHm_v2.0_Chr4g0435771 Rosa chinensis HOM05D000466 ORTHO05D000331 3.8e-07 57.8 67 44.8
Aa31LG2G6590 Aethionema arabicum HOM05D000466 ORTHO05D000331 6.6e-07 57.0 68 44.1
COL.COLO4_07873 Corchorus olitorius HOM05D000466 ORTHO05D000331 6.6e-07 57.0 66 43.9
FvH4_4g28030 Fragaria vesca HOM05D000466 ORTHO05D000331 6.6e-07 57.0 67 44.8
FAN07G0290 Fragaria x ananassa HOM05D000466 ORTHO05D000331 6.6e-07 57.0 67 44.8
FAN12G3561 Fragaria x ananassa HOM05D000466 ORTHO05D000331 6.6e-07 57.0 67 44.8
FAN22G2233 Fragaria x ananassa HOM05D000466 ORTHO05D000331 6.6e-07 57.0 67 44.8
Nn3g17748 Nelumbo nucifera HOM05D000466 ORTHO05D000331 6.6e-07 57.0 66 42.4
Sabra10G0098300 Salix brachista HOM05D000466 ORTHO05D000331 6.6e-07 57.0 66 43.9
Thecc.02G360500 Theobroma cacao HOM05D000466 ORTHO05D000331 6.6e-07 57.0 66 43.9
DCAR_023683 Daucus carota HOM05D000466 ORTHO05D000331 8.6e-07 56.6 66 43.9
Gohir.A12G170100 Gossypium hirsutum HOM05D000466 ORTHO05D000331 8.6e-07 56.6 66 42.4
Gohir.D12G173400 Gossypium hirsutum HOM05D000466 ORTHO05D000331 8.6e-07 56.6 66 42.4
Gorai.008G185900 Gossypium raimondii HOM05D000466 ORTHO05D000331 8.6e-07 56.6 66 42.4
Manes.06G071700 Manihot esculenta HOM05D000466 ORTHO05D000331 8.6e-07 56.6 66 43.9
Sabra08G0088800 Salix brachista HOM05D000466 ORTHO05D000331 8.6e-07 56.6 65 44.6
Sabra08G0088900 Salix brachista HOM05D000466 ORTHO05D000331 8.6e-07 56.6 65 44.6
Sp5g23950 Schrenkiella parvula HOM05D000466 ORTHO05D000331 8.6e-07 56.6 63 42.9
BcaC03g17289 Brassica carinata HOM05D000466 ORTHO05D000331 1.1e-06 56.2 66 40.9
A02p34080 Brassica napus HOM05D000466 ORTHO05D000331 1.1e-06 56.2 66 40.9
C02p52340 Brassica napus HOM05D000466 ORTHO05D000331 1.1e-06 56.2 66 40.9
BolC2t11317H Brassica oleracea HOM05D000466 ORTHO05D000331 1.1e-06 56.2 66 40.9
BraA02t08425Z Brassica rapa HOM05D000466 ORTHO05D000331 1.1e-06 56.2 66 40.9
FAN17G0567 Fragaria x ananassa HOM05D000466 ORTHO05D000331 1.1e-06 56.2 67 44.8
Actinidia16620 Actinidia chinensis HOM05D000466 ORTHO05D000331 1.5e-06 55.8 66 43.9
Dinv21128 Davidia involucrata HOM05D000466 ORTHO05D000331 1.5e-06 55.8 66 43.9
Thhalv10019566m.g Eutrema salsugineum HOM05D000466 ORTHO05D000331 1.5e-06 55.8 63 42.9
Potri.008G117100 Populus trichocarpa HOM05D000466 ORTHO05D000331 1.5e-06 55.8 65 44.6
SHI15899 Sapria himalayana HOM05D000466 ORTHO05D000331 1.5e-06 55.8 66 40.9
AT3G25730 Arabidopsis thaliana HOM05D000466 ORTHO05D000331 1.9e-06 55.5 70 41.4
CSS0034576 Camellia sinensis var. sinensis HOM05D000466 ORTHO05D000331 1.9e-06 55.5 65 43.1
Duzib251G0472 Durio zibethinus HOM05D000466 ORTHO05D000331 1.9e-06 55.5 66 42.4
CANSAT64G2628 Cannabis sativa HOM05D000466 ORTHO05D000331 2.5e-06 55.1 69 42.0
CARHR061680 Cardamine hirsuta HOM05D000466 ORTHO05D000331 2.5e-06 55.1 63 42.9
Migut.E00306 Erythranthe guttata HOM05D000466 ORTHO05D000331 2.5e-06 55.1 65 44.6
Dinv16504 Davidia involucrata HOM05D000466 ORTHO05D000331 3.3e-06 54.7 66 43.9
BcaB05g24418 Brassica carinata HOM05D000466 ORTHO05D000331 4.2e-06 54.3 63 41.3
CARHR025890 Cardamine hirsuta HOM05D000466 ORTHO05D000331 4.2e-06 54.3 63 41.3
BcaB07g30255 Brassica carinata HOM05D000466 ORTHO05D000331 5.5e-06 53.9 66 37.9
CAN.G1982.7 Capsicum annuum HOM05D000466 ORTHO05D000331 5.5e-06 53.9 67 43.3
Duzib268G1164 Durio zibethinus HOM05D000466 ORTHO05D000331 5.5e-06 53.9 66 40.9
AL1G39740 Arabidopsis lyrata HOM05D000466 ORTHO05D000331 7.2e-06 53.5 63 41.3
AT1G25560 Arabidopsis thaliana HOM05D000466 ORTHO05D000331 7.2e-06 53.5 63 41.3
Carub.0002s1543 Capsella rubella HOM05D000466 ORTHO05D000331 7.2e-06 53.5 63 42.9
MBI16_g25113_MAGBIO Magnolia biondii HOM05D000466 ORTHO05D000331 7.2e-06 53.5 66 42.4
QL01p045082 Quercus lobata HOM05D000466 ORTHO05D000331 7.2e-06 53.5 65 41.5
Aqoxy3G00370 Aquilegia oxysepala HOM05D000466 ORTHO05D000331 9.5e-06 53.1 63 41.3
Aqoxy3G03915 Aquilegia oxysepala HOM05D000466 ORTHO05D000331 9.5e-06 53.1 66 37.9
BcaB03g12078 Brassica carinata HOM05D000466 ORTHO05D000331 9.5e-06 53.1 63 41.3
BcaC03g15000 Brassica carinata HOM05D000466 ORTHO05D000331 9.5e-06 53.1 63 41.3
C02p25460 Brassica napus HOM05D000466 ORTHO05D000331 9.5e-06 53.1 63 41.3
BolC2t08612H Brassica oleracea HOM05D000466 ORTHO05D000331 9.5e-06 53.1 63 41.3
Ciclev10031846m.g Citrus clementina HOM05D000466 ORTHO05D000331 9.5e-06 53.1 67 44.8
Glyma.02G099500 Glycine max HOM05D000466 ORTHO05D000331 9.5e-06 53.1 69 42.0
MBI09_g36359_MAGBIO Magnolia biondii HOM05D000466 ORTHO05D000331 9.5e-06 53.1 66 40.9
PSO063G2521 Papaver somniferum HOM05D000466 ORTHO05D000331 9.5e-06 53.1 66 37.9
Potri.010G129200 Populus trichocarpa HOM05D000466 ORTHO05D000331 9.5e-06 53.1 62 43.5
TAR629G1512 Trochodendron aralioides HOM05D000466 ORTHO05D000331 9.5e-06 53.1 66 37.9


User provided reference genes

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