Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc41.38 Carica papaya HOM05D000121 ORTHO05D015773 1.0e-66 256.5 123 100.0
QL04p025142 Quercus lobata HOM05D000121 ORTHO05D000102 8.4e-37 157.1 123 60.2
Cfa011010 Carpinus fangiana HOM05D000121 ORTHO05D000102 5.1e-34 147.9 121 55.4
RcHm_v2.0_Chr1g0340151 Rosa chinensis HOM05D000121 ORTHO05D000102 6.7e-34 147.5 123 56.9
Haze_02927 Corylus avellana HOM05D000121 ORTHO05D000102 1.9e-33 146.0 123 55.3
Dinv43571 Davidia involucrata HOM05D000121 ORTHO05D000102 4.3e-33 144.8 123 55.3
Atru.chr5.20 Acer truncatum HOM05D000121 ORTHO05D000102 7.4e-33 144.1 123 54.5
Haze_02928 Corylus avellana HOM05D000121 ORTHO05D000102 9.6e-33 143.7 123 55.3
FvH4_7g08440 Fragaria vesca HOM05D000121 ORTHO05D000102 9.6e-33 143.7 123 53.7
FAN10G3517 Fragaria x ananassa HOM05D000121 ORTHO05D000102 9.6e-33 143.7 123 53.7
Cfa011011 Carpinus fangiana HOM05D000121 ORTHO05D000102 2.1e-32 142.5 123 54.5
FAN03G2042 Fragaria x ananassa HOM05D000121 ORTHO05D000102 2.8e-32 142.1 123 52.8
FAN06G3337 Fragaria x ananassa HOM05D000121 ORTHO05D000102 3.7e-32 141.7 123 52.8
RcHm_v2.0_Chr0c20g0500301 Rosa chinensis HOM05D000121 ORTHO05D015773 4.8e-32 141.4 123 51.2
RcHm_v2.0_Chr1g0340111 Rosa chinensis HOM05D000121 ORTHO05D000102 4.8e-32 141.4 123 51.2
Duzib213G1011 Durio zibethinus HOM05D000121 ORTHO05D000102 1.4e-31 139.8 123 51.2
Potri.014G180100 Populus trichocarpa HOM05D000121 ORTHO05D000102 1.8e-31 139.4 124 52.4
Thecc.10G001000 Theobroma cacao HOM05D000121 ORTHO05D000102 1.8e-31 139.4 123 50.4
FAN01G2493 Fragaria x ananassa HOM05D000121 ORTHO05D000102 2.4e-31 139.0 123 51.2
Prupe.2G111500 Prunus persica HOM05D000121 ORTHO05D000102 2.4e-31 139.0 123 51.2
CSS0010150 Camellia sinensis var. sinensis HOM05D000121 ORTHO05D000102 6.9e-31 137.5 123 52.8
CSS0042039 Camellia sinensis var. sinensis HOM05D000121 ORTHO05D000102 2.0e-30 136.0 121 54.5
Eucgr.E01719 Eucalyptus grandis HOM05D000121 ORTHO05D000102 2.6e-30 135.6 123 50.4
MD07G1084200 Malus domestica HOM05D000121 ORTHO05D000102 2.6e-30 135.6 123 50.4
TWI59G0195 Tripterygium wilfordii HOM05D000121 ORTHO05D000102 2.6e-30 135.6 123 52.0
CiPaw.13G019600 Carya illinoinensis HOM05D000121 ORTHO05D000102 5.8e-30 134.4 121 52.1
Manes.05G060300 Manihot esculenta HOM05D000121 ORTHO05D000102 1.0e-29 133.7 123 51.2
TWI14G0569 Tripterygium wilfordii HOM05D000121 ORTHO05D000102 2.2e-29 132.5 123 51.2
Actinidia05799 Actinidia chinensis HOM05D000121 ORTHO05D000102 4.9e-29 131.3 123 48.8
TAR375G1159 Trochodendron aralioides HOM05D000121 ORTHO05D000102 1.1e-28 130.2 123 51.2
Duzib106G0522 Durio zibethinus HOM05D000121 ORTHO05D000102 1.9e-28 129.4 123 50.4
Eucgr.E01720 Eucalyptus grandis HOM05D000121 ORTHO05D000102 3.2e-28 128.6 123 50.4
Ciclev10018481m.g Citrus clementina HOM05D000121 ORTHO05D000102 1.6e-27 126.3 125 48.8
Eucgr.E01721 Eucalyptus grandis HOM05D000121 ORTHO05D000102 1.6e-27 126.3 123 49.6
Sabra14G0138100 Salix brachista HOM05D000121 ORTHO05D000102 1.6e-27 126.3 124 48.4
Sabra14G0140200 Salix brachista HOM05D000121 ORTHO05D000102 1.6e-27 126.3 124 48.4
CSS0040380 Camellia sinensis var. sinensis HOM05D000121 ORTHO05D015773 2.7e-27 125.6 123 48.0
Hma1.2p1_0021F.1_g014400 Hydrangea macrophylla HOM05D000121 ORTHO05D000102 6.0e-27 124.4 123 48.8
TAR374G0150 Trochodendron aralioides HOM05D000121 ORTHO05D000102 1.0e-26 123.6 123 48.8
Nitab4.5_0009812g0030 Nicotiana tabacum HOM05D000121 ORTHO05D000102 1.3e-26 123.2 119 47.1
MSTRG.28126 Avicennia marina HOM05D000121 ORTHO05D000102 5.1e-26 121.3 123 46.3
Cc02_g25860 Coffea canephora HOM05D000121 ORTHO05D000102 8.7e-26 120.6 123 46.3
Nitab4.5_0000166g0120 Nicotiana tabacum HOM05D000121 ORTHO05D000102 1.9e-25 119.4 119 46.2
Gohir.D10G254700 Gossypium hirsutum HOM05D000121 ORTHO05D000102 4.3e-25 118.2 121 45.5
Lj9A547G70 Lonicera japonica HOM05D000121 ORTHO05D000102 4.3e-25 118.2 123 48.0
Lsat_1_v5_gn_5_31221 Lactuca sativa HOM05D000121 ORTHO05D000102 5.7e-25 117.9 123 46.3
PGR042G2381 Punica granatum HOM05D000121 ORTHO05D000102 1.6e-24 116.3 123 46.3
Nitab4.5_0000548g0180 Nicotiana tabacum HOM05D000121 ORTHO05D000102 2.2e-24 115.9 119 44.5
Phvul.010G040400 Phaseolus vulgaris HOM05D000121 ORTHO05D000102 2.2e-24 115.9 123 43.1
Nn6g33651 Nelumbo nucifera HOM05D000121 ORTHO05D000102 3.7e-24 115.2 123 43.1
Peaxi162Scf00901g00110 Petunia axillaris HOM05D000121 ORTHO05D000102 3.7e-24 115.2 123 43.1
Gorai.011G295700 Gossypium raimondii HOM05D000121 ORTHO05D000102 4.8e-24 114.8 121 43.8
Ah.05g177510 Amaranthus hybridus HOM05D000121 ORTHO05D000102 8.2e-24 114.0 124 46.8
Migut.N01705 Erythranthe guttata HOM05D000121 ORTHO05D000102 8.2e-24 114.0 130 48.5
RhsimUnG0113900 Rhododendron simsii HOM05D000121 ORTHO05D000102 8.2e-24 114.0 123 46.3
Nitab4.5_0000765g0050 Nicotiana tabacum HOM05D000121 ORTHO05D000102 1.4e-23 113.2 119 44.5
SGA_v2.0_scaffold77G25239 Striga asiatica HOM05D000121 ORTHO05D000102 1.8e-23 112.8 124 46.8
vmacro13548 Vaccinium macrocarpon HOM05D000121 ORTHO05D000102 2.4e-23 112.5 123 48.0
VMungo0331G0813 Vigna mungo HOM05D000121 ORTHO05D000102 2.4e-23 112.5 123 43.1
ECA246G3049 Erigeron canadensis HOM05D000121 ORTHO05D000102 4.1e-23 111.7 125 42.4
Rhsim07G0040400 Rhododendron simsii HOM05D000121 ORTHO05D000102 4.1e-23 111.7 123 46.3
Solyc10g024420.3 Solanum lycopersicum HOM05D000121 ORTHO05D000102 4.1e-23 111.7 123 43.9
Lj7A553T52 Lonicera japonica HOM05D000121 ORTHO05D000102 5.3e-23 111.3 123 45.5
arahy.Tifrunner.gnm1.ann1.WX55PG Arachis hypogaea HOM05D000121 ORTHO05D000102 6.9e-23 110.9 123 41.5
Glyma.07G121900 Glycine max HOM05D000121 ORTHO05D000102 6.9e-23 110.9 123 44.7
PGSC0003DMG400021922 Solanum tuberosum HOM05D000121 ORTHO05D000102 6.9e-23 110.9 123 42.3
CAN.G95.14 Capsicum annuum HOM05D000121 ORTHO05D000102 2.0e-22 109.4 123 40.7
AUR62013807 Chenopodium quinoa HOM05D000121 ORTHO05D000102 2.0e-22 109.4 124 44.4
Hund27426 Selenicereus undatus HOM05D000121 ORTHO05D000102 2.6e-22 109.0 124 44.4
TPR.G17381 Trifolium pratense HOM05D000121 ORTHO05D000102 2.6e-22 109.0 126 42.9
Glyma.03G101000 Glycine max HOM05D000121 ORTHO05D000102 3.4e-22 108.6 126 44.4
arahy.Tifrunner.gnm1.ann1.B968KT Arachis hypogaea HOM05D000121 ORTHO05D000102 5.9e-22 107.8 123 40.7
Ca_25881_v3 Cicer arietinum L. HOM05D000121 ORTHO05D000102 5.9e-22 107.8 127 43.3
Lalb_Chr07g0194961 Lupinus albus HOM05D000121 ORTHO05D000102 5.9e-22 107.8 124 41.1
Sc26g0001900 Simmondsia chinensis HOM05D000121 ORTHO05D000102 7.6e-22 107.5 121 43.0
DCAR_001369 Daucus carota HOM05D000121 ORTHO05D000102 1.0e-21 107.1 123 39.8
AUR62023351 Chenopodium quinoa HOM05D000121 ORTHO05D000102 1.3e-21 106.7 124 41.1
PGSC0003DMG402004392 Solanum tuberosum HOM05D000121 ORTHO05D000102 1.3e-21 106.7 121 42.1
Nn1g00601 Nelumbo nucifera HOM05D000121 ORTHO05D000102 1.7e-21 106.3 123 41.5
EL10Ac1g00700 Beta vulgaris HOM05D000121 ORTHO05D000102 6.5e-21 104.4 125 42.4
COL.COLO4_19316 Corchorus olitorius HOM05D000121 ORTHO05D000102 8.5e-21 104.0 111 43.2
THA.LOC104817169 Tarenaya hassleriana HOM05D000121 ORTHO05D000102 8.5e-21 104.0 123 43.9
CANSAT47G0001 Cannabis sativa HOM05D000121 ORTHO05D000102 1.1e-20 103.6 124 41.9
Psat4g216600 Pisum sativum HOM05D000121 ORTHO05D000102 1.4e-20 103.2 125 41.6
HanXRQChr16g0505351 Helianthus annuus HOM05D000121 ORTHO05D000102 3.2e-20 102.1 125 40.0
Lj3g0003674 Lotus japonicus HOM05D000121 ORTHO05D000102 3.2e-20 102.1 126 45.2
ClCG05G002750 Citrullus lanatus HOM05D000121 ORTHO05D000102 4.2e-20 101.7 123 39.0
AT3G60160 Arabidopsis thaliana HOM05D000121 ORTHO05D000102 5.5e-20 101.3 123 42.3
Carub.0005s2689 Capsella rubella HOM05D000121 ORTHO05D000102 5.5e-20 101.3 123 41.5
MBI04_g31969_MAGBIO Magnolia biondii HOM05D000121 ORTHO05D000102 9.3e-20 100.5 120 41.7
unitig_5.g30995 Utricularia gibba HOM05D000121 ORTHO05D000102 1.6e-19 99.8 120 39.2
unitig_748.g7125 Utricularia gibba HOM05D000331 ORTHO05D000732 1.6e-19 99.8 120 39.2
Aa31LG10G14310 Aethionema arabicum HOM05D000121 ORTHO05D000102 2.7e-19 99.0 120 38.3
Aqoxy3G02498 Aquilegia oxysepala HOM05D000121 ORTHO05D000102 2.7e-19 99.0 123 39.0
CsaV3_3G010240 Cucumis sativus L. HOM05D000121 ORTHO05D000102 3.6e-19 98.6 123 37.4
Nn6g33660 Nelumbo nucifera HOM05D000121 ORTHO05D000102 3.6e-19 98.6 123 40.7
AL5G42370 Arabidopsis lyrata HOM05D000121 ORTHO05D000102 6.1e-19 97.8 121 39.7
Medtr8g009630 Medicago truncatula HOM05D000121 ORTHO05D015773 1.4e-18 96.7 125 41.6
Sp5g03050 Schrenkiella parvula HOM05D000121 ORTHO05D000102 1.8e-18 96.3 125 38.4
MELO3C006247.2 Cucumis melo HOM05D000121 ORTHO05D000102 3.0e-18 95.5 121 34.7
QL04p025242 Quercus lobata HOM05D000121 ORTHO05D000102 3.0e-18 95.5 123 39.8
Sed0014386 Sechium edule HOM05D000121 ORTHO05D000102 3.9e-18 95.1 121 38.0
PSO782G1650 Papaver somniferum HOM05D000121 ORTHO05D000102 5.1e-18 94.7 123 34.1
PSO832G2985 Papaver somniferum HOM05D000121 ORTHO05D015773 6.7e-18 94.4 121 36.4
MELO3C006244.2 Cucumis melo HOM05D000121 ORTHO05D000102 1.1e-17 93.6 124 37.1
Thhalv10005742m.g Eutrema salsugineum HOM05D000121 ORTHO05D000102 1.1e-17 93.6 123 39.8
BcaB02g07430 Brassica carinata HOM05D000121 ORTHO05D000102 1.5e-17 93.2 119 37.8
C06p26550 Brassica napus HOM05D000121 ORTHO05D000102 1.5e-17 93.2 122 39.3
A07p24980 Brassica napus HOM05D000121 ORTHO05D000102 1.9e-17 92.8 124 38.7
BraA07t30139Z Brassica rapa HOM05D000121 ORTHO05D000102 1.9e-17 92.8 124 38.7
MELO3C006246.2 Cucumis melo HOM05D000121 ORTHO05D000102 1.9e-17 92.8 121 35.5
PSO782G0356 Papaver somniferum HOM05D000121 ORTHO05D000102 1.9e-17 92.8 121 36.4
BolC6t37818H Brassica oleracea HOM05D000121 ORTHO05D000102 4.3e-17 91.7 122 38.5
CsaV3_3G010260 Cucumis sativus L. HOM05D000121 ORTHO05D000102 7.4e-17 90.9 121 34.7
Sed0027562 Sechium edule HOM05D000121 ORTHO05D000102 7.4e-17 90.9 123 34.1
GSVIVG01018403001 Vitis vinifera HOM05D000121 ORTHO05D000102 2.2e-16 89.4 89 48.3
Zm00001eb428300 Zea mays HOM05D000121 ORTHO05D000102 1.1e-15 87.0 123 35.8
BcaC08g45024 Brassica carinata HOM05D000121 ORTHO05D000102 1.4e-15 86.7 122 36.9
DCAR_000773 Daucus carota HOM05D000121 ORTHO05D000102 1.4e-15 86.7 121 37.2
PSO063G3585 Papaver somniferum HOM05D000121 ORTHO05D000102 1.8e-15 86.3 123 35.0
CARHR170470 Cardamine hirsuta HOM05D000121 ORTHO05D000102 4.1e-15 85.1 124 38.7
PSO421G0032 Papaver somniferum HOM05D000121 ORTHO05D015773 5.3e-15 84.7 121 36.4
PSO421G0370 Papaver somniferum HOM05D000121 ORTHO05D015773 5.3e-15 84.7 121 36.4
Oeu002886.1 Olea europaea HOM05D000121 ORTHO05D000102 4.5e-14 81.6 79 50.6
HPP92_020912 Vanilla planifolia HOM05D000121 ORTHO05D000102 2.9e-13 79.0 123 35.8
PSO421G0618 Papaver somniferum HOM05D000121 ORTHO05D000102 2.5e-12 75.9 127 33.1
ATR0049G048 Amborella trichopoda HOM05D000121 ORTHO05D000102 8.8e-10 67.4 124 31.5
Actinidia30965 Actinidia chinensis HOM05D000121 ORTHO05D015773 3.3e-09 65.5 58 56.9
AagrBONN_evm.TU.Sc2ySwM_344.4797 Anthoceros agrestis HOM05D000121 ORTHO05D000102 4.4e-09 65.1 114 25.4
SEGI_14852 Sequoiadendron giganteum HOM05D000121 ORTHO05D000102 4.1e-07 58.5 123 30.9
Pp3c13_19960 Physcomitrium patens HOM05D000121 ORTHO05D000102 2.6e-06 55.8 121 27.3
PGSC0003DMG400035127 Solanum tuberosum HOM05D000121 ORTHO05D015773 7.7e-06 54.3 60 48.3
PGSC0003DMG400045156 Solanum tuberosum HOM05D000121 ORTHO05D015773 7.7e-06 54.3 60 48.3


User provided reference genes

Program Settings