Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc41.28 Carica papaya HOM05D000004 ORTHO05D000563 1.2e-59 233.0 118 100.0
Cpa.g.sc41.26 Carica papaya HOM05D000004 ORTHO05D000563 4.7e-45 184.5 117 82.1
Cpa.g.sc66.64 Carica papaya HOM05D000004 ORTHO05D000563 3.1e-44 181.8 117 80.3
Cpa.g.sc239.3 Carica papaya HOM05D000004 ORTHO05D000563 1.9e-41 172.6 117 75.2
Cpa.g.sc40.40 Carica papaya HOM05D000004 ORTHO05D000563 2.4e-41 172.2 117 70.1
Cpa.g.sc97.21 Carica papaya HOM05D000004 ORTHO05D000563 6.0e-40 167.5 117 70.1
Cpa.g.sc143.9 Carica papaya HOM05D000004 ORTHO05D000563 1.7e-39 166.0 117 76.9
Cpa.g.sc10.121 Carica papaya HOM05D000004 ORTHO05D000563 1.9e-38 162.5 103 77.7
Cpa.g.sc2164.2 Carica papaya HOM05D000004 ORTHO05D000563 1.7e-34 149.4 117 61.5
Cpa.g.sc1925.3 Carica papaya HOM05D000004 ORTHO05D000563 6.4e-34 147.5 106 73.6
Cpa.g.sc38.73 Carica papaya HOM05D000004 ORTHO05D000563 1.0e-31 140.2 98 76.5
Cpa.g.sc11.160 Carica papaya HOM05D000004 ORTHO05D000563 2.5e-30 135.6 100 74.0
Cpa.g.sc910.1 Carica papaya HOM05D000004 ORTHO05D000563 3.6e-29 131.7 100 67.0
Cpa.g.sc3815.1 Carica papaya HOM05D000004 ORTHO05D000563 2.6e-27 125.6 118 58.5
Cpa.g.sc40.67 Carica papaya HOM05D000004 ORTHO05D000563 5.8e-27 124.4 89 66.3
Cpa.g.sc4.191 Carica papaya HOM05D000004 ORTHO05D000563 5.4e-25 117.9 100 60.0
Cpa.g.sc41.76 Carica papaya HOM05D000004 ORTHO05D000563 5.1e-23 111.3 91 65.9
Cpa.g.sc78.88 Carica papaya HOM05D000004 ORTHO05D000563 8.1e-21 104.0 77 71.4
Cpa.g.sc31.30 Carica papaya HOM05D000004 ORTHO05D000563 1.1e-20 103.6 73 76.7
Cpa.g.sc1785.1 Carica papaya HOM05D000004 ORTHO05D000563 1.3e-15 86.7 49 81.6
Cpa.g.sc60.9 Carica papaya HOM05D000004 ORTHO05D000563 1.3e-15 86.7 111 48.6
Cpa.g.sc98.4 Carica papaya HOM05D000004 ORTHO05D000563 3.0e-15 85.5 73 58.9
Cpa.g.sc75.77 Carica papaya HOM05D000004 ORTHO05D000563 1.9e-14 82.8 47 76.6
Cpa.g.sc124.46 Carica papaya HOM05D000004 ORTHO05D000563 1.6e-13 79.7 42 83.3
Cpa.g.sc113.48 Carica papaya HOM05D000004 ORTHO05D000563 6.2e-13 77.8 64 57.8
Cpa.g.sc56.12 Carica papaya HOM05D000004 ORTHO05D000563 8.1e-13 77.4 55 61.8
Cpa.g.sc100.21 Carica papaya HOM05D000004 ORTHO05D000563 6.9e-12 74.3 116 37.9
Cpa.g.sc92.118 Carica papaya HOM05D000004 ORTHO05D000563 1.2e-11 73.6 98 43.9
PGR119G1621 Punica granatum HOM05D000004 ORTHO05D000563 1.3e-10 70.1 119 37.0
PGR004G2150 Punica granatum HOM05D000004 ORTHO05D000002 2.9e-10 68.9 44 63.6
PGR031G3733 Punica granatum HOM05D000004 ORTHO05D000563 2.9e-10 68.9 64 51.6
SHI49845 Sapria himalayana HOM05D000004 ORTHO05D000563 3.8e-10 68.6 60 55.0
THA.LOC104799780 Tarenaya hassleriana HOM05D000004 ORTHO05D000563 4.9e-10 68.2 113 36.3
THA.LOC104806048 Tarenaya hassleriana HOM05D000004 ORTHO05D000563 6.4e-10 67.8 113 36.3
PGR102G0770 Punica granatum HOM05D000004 ORTHO05D000002 1.1e-09 67.0 141 31.9
Cpa.g.sc22.77 Carica papaya HOM05D000004 ORTHO05D000563 1.4e-09 66.6 99 40.4
THA.LOC104821896 Tarenaya hassleriana HOM05D000004 ORTHO05D000563 1.4e-09 66.6 113 35.4
THA.LOC109116513 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 1.4e-09 66.6 65 50.8
THA.LOC109117128 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 1.4e-09 66.6 65 50.8
Cpa.g.sc40.46 Carica papaya HOM05D000004 ORTHO05D000563 2.4e-09 65.9 103 37.9
THA.LOC109116955 Tarenaya hassleriana HOM05D000004 ORTHO05D000563 2.4e-09 65.9 65 50.8
Cpa.g.sc2811.1 Carica papaya HOM05D000004 ORTHO05D000563 4.2e-09 65.1 98 39.8
SHI32913 Sapria himalayana HOM05D000004 ORTHO05D000563 4.2e-09 65.1 44 56.8
Cpa.g.sc39.88 Carica papaya HOM05D000004 ORTHO05D000563 5.5e-09 64.7 44 65.9
QL07p027315 Quercus lobata HOM05D000004 ORTHO05D000002 5.5e-09 64.7 120 32.5
PGR025G0001 Punica granatum HOM05D000004 ORTHO05D000002 9.3e-09 63.9 49 57.1
PGR044G2607 Punica granatum HOM05D000004 ORTHO05D000002 9.3e-09 63.9 49 57.1
PGR052G0001 Punica granatum HOM05D000004 ORTHO05D000002 9.3e-09 63.9 49 57.1
PGR083G1623 Punica granatum HOM05D000004 ORTHO05D000002 9.3e-09 63.9 49 57.1
PGR115G0001 Punica granatum HOM05D000004 ORTHO05D000002 9.3e-09 63.9 49 57.1
PGR119G1513 Punica granatum HOM05D000004 ORTHO05D000002 9.3e-09 63.9 49 57.1
PGR119G1563 Punica granatum HOM05D000004 ORTHO05D000563 9.3e-09 63.9 49 57.1
CANSAT25G3060 Cannabis sativa HOM05D000004 ORTHO05D000563 1.6e-08 63.2 43 55.8
Cpa.g.sc172.6 Carica papaya HOM05D000004 ORTHO05D000563 1.6e-08 63.2 100 41.0
Cpa.g.sc205.5 Carica papaya HOM05D000004 ORTHO05D000563 1.6e-08 63.2 85 37.6
Cpa.g.sc303.4 Carica papaya HOM05D000004 ORTHO05D000563 1.6e-08 63.2 91 40.7
Cpa.g.sc305.4 Carica papaya HOM05D000004 ORTHO05D000563 1.6e-08 63.2 91 40.7
PGR044G0113 Punica granatum HOM05D000004 ORTHO05D000563 1.6e-08 63.2 49 57.1
PGR044G1656 Punica granatum HOM05D000004 ORTHO05D000563 1.6e-08 63.2 49 57.1
QL11p008013 Quercus lobata HOM05D000004 ORTHO05D000563 1.6e-08 63.2 141 31.9
Cpa.g.sc141.7 Carica papaya HOM05D000004 ORTHO05D000563 2.1e-08 62.8 33 78.8
Cpa.g.sc3055.1 Carica papaya HOM05D000004 ORTHO05D000563 2.1e-08 62.8 102 42.2
PGR004G1708 Punica granatum HOM05D000004 ORTHO05D000563 2.1e-08 62.8 38 63.2
PGR004G2489 Punica granatum HOM05D000004 ORTHO05D000002 2.1e-08 62.8 64 50.0
Cpa.g.sc38.20 Carica papaya HOM05D000004 ORTHO05D000563 2.7e-08 62.4 126 34.1
Cpa.g.sc943.3 Carica papaya HOM05D000004 ORTHO05D000563 2.7e-08 62.4 120 33.3
PGR031G2848 Punica granatum HOM05D000004 ORTHO05D000002 2.7e-08 62.4 47 57.4
PGR083G2791 Punica granatum HOM05D000004 ORTHO05D000563 2.7e-08 62.4 47 57.4
Cpa.g.sc79.55 Carica papaya HOM05D000004 ORTHO05D000563 3.5e-08 62.0 102 38.2
PGR142G1811 Punica granatum HOM05D000004 ORTHO05D000002 3.5e-08 62.0 49 55.1
THA.LOC109116027 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 3.5e-08 62.0 115 33.9
Cpa.g.sc143.15 Carica papaya HOM05D000004 ORTHO05D000563 4.6e-08 61.6 117 35.0
Cpa.g.sc1555.3 Carica papaya HOM05D000004 ORTHO05D000563 4.6e-08 61.6 81 44.4
Cpa.g.sc251.2 Carica papaya HOM05D000004 ORTHO05D000563 4.6e-08 61.6 91 40.7
Cpa.g.sc28.100 Carica papaya HOM05D000004 ORTHO05D000563 4.6e-08 61.6 92 40.2
Cpa.g.sc28.156 Carica papaya HOM05D000004 ORTHO05D000563 4.6e-08 61.6 102 38.2
Cpa.g.sc15.34 Carica papaya HOM05D000004 ORTHO05D000563 6.0e-08 61.2 39 61.5
PGR102G2704 Punica granatum HOM05D000004 ORTHO05D000002 6.0e-08 61.2 49 55.1
THA.LOC104818534 Tarenaya hassleriana HOM05D000004 ORTHO05D000563 6.0e-08 61.2 110 37.3
Cpa.g.sc0.188 Carica papaya HOM05D000004 ORTHO05D000563 7.9e-08 60.8 99 39.4
Cpa.g.sc225.2 Carica papaya HOM05D000004 ORTHO05D000563 7.9e-08 60.8 91 39.6
Cpa.g.sc372.2 Carica papaya HOM05D000004 ORTHO05D000563 7.9e-08 60.8 91 39.6
Cpa.g.sc38.15 Carica papaya HOM05D000004 ORTHO05D000563 7.9e-08 60.8 102 37.3
PGR004G1184 Punica granatum HOM05D000004 ORTHO05D000563 7.9e-08 60.8 38 60.5
Cpa.g.sc148.24 Carica papaya HOM05D000004 ORTHO05D000563 1.0e-07 60.5 60 56.7
Cpa.g.sc15.23 Carica papaya HOM05D000004 ORTHO05D000563 1.0e-07 60.5 33 81.8
Cpa.g.sc30.31 Carica papaya HOM05D000004 ORTHO05D000563 1.0e-07 60.5 115 33.9
QL10p037628 Quercus lobata HOM05D000004 ORTHO05D000002 1.0e-07 60.5 70 44.3
THA.LOC104822353 Tarenaya hassleriana HOM05D000442 ORTHO05D001979 1.0e-07 60.5 50 54.0
Atru.chr6.660 Acer truncatum HOM05D000003 ORTHO05D000004 1.3e-07 60.1 43 53.5
Cpa.g.sc42.7 Carica papaya HOM05D055815 ORTHO05D000563 1.3e-07 60.1 44 65.9
Lj5g0019047 Lotus japonicus HOM05D000004 ORTHO05D000563 1.3e-07 60.1 117 35.0
PGR102G1518 Punica granatum HOM05D000004 ORTHO05D000563 1.3e-07 60.1 64 46.9
TPR.G40552 Trifolium pratense HOM05D000004 ORTHO05D000563 1.3e-07 60.1 66 37.9
Cpa.g.sc15.96 Carica papaya HOM05D000004 ORTHO05D000563 1.8e-07 59.7 102 36.3
Cpa.g.sc15.98 Carica papaya HOM05D000004 ORTHO05D000563 1.8e-07 59.7 102 36.3
Cpa.g.sc32.166 Carica papaya HOM05D000004 ORTHO05D000563 1.8e-07 59.7 121 35.5
Cpa.g.sc54.19 Carica papaya HOM05D000004 ORTHO05D000563 1.8e-07 59.7 102 35.3
Atru.chr8.565 Acer truncatum HOM05D000004 ORTHO05D000563 3.0e-07 58.9 43 51.2
Atru.chr9.178 Acer truncatum HOM05D000004 ORTHO05D000563 3.0e-07 58.9 44 50.0
Cpa.g.sc56.54 Carica papaya HOM05D000004 ORTHO05D000563 3.0e-07 58.9 117 32.5
SHI51545 Sapria himalayana HOM05D000004 ORTHO05D000563 3.0e-07 58.9 39 59.0
SHI54914 Sapria himalayana HOM05D000004 ORTHO05D009927 3.0e-07 58.9 41 56.1
Cpa.g.sc219.5 Carica papaya HOM05D000004 ORTHO05D000563 3.9e-07 58.5 123 33.3
Cpa.g.sc658.1 Carica papaya HOM05D000004 ORTHO05D000563 3.9e-07 58.5 48 52.1
Cpa.g.sc826.2 Carica papaya HOM05D000004 ORTHO05D000563 3.9e-07 58.5 126 33.3
Cpa.g.sc88.32 Carica papaya HOM05D000004 ORTHO05D000563 3.9e-07 58.5 43 60.5
Cpa.g.sc1356.1 Carica papaya HOM05D000004 ORTHO05D000563 5.1e-07 58.2 39 56.4
Cpa.g.sc38.3 Carica papaya HOM05D000004 ORTHO05D000563 5.1e-07 58.2 124 33.1
Cpa.g.sc1318.1 Carica papaya HOM05D000004 ORTHO05D000563 8.7e-07 57.4 38 60.5
Cpa.g.sc35.67 Carica papaya HOM05D000004 ORTHO05D000563 8.7e-07 57.4 92 40.2
Cpa.g.sc60.61 Carica papaya HOM05D000004 ORTHO05D000563 8.7e-07 57.4 41 56.1
SHI01378 Sapria himalayana HOM05D000004 ORTHO05D000563 8.7e-07 57.4 33 69.7
Cpa.g.sc38.75 Carica papaya HOM05D000004 ORTHO05D000563 1.5e-06 56.6 89 38.2
Cpa.g.sc484.1 Carica papaya HOM05D000004 ORTHO05D000563 1.5e-06 56.6 37 62.2
Cpa.g.sc2455.1 Carica papaya HOM05D000004 ORTHO05D000563 1.9e-06 56.2 31 67.7
PGR031G1605 Punica granatum HOM05D000004 ORTHO05D000002 1.9e-06 56.2 36 61.1
PGR042G0073 Punica granatum HOM05D000004 ORTHO05D000002 1.9e-06 56.2 38 57.9
PGR083G2735 Punica granatum HOM05D000004 ORTHO05D000002 1.9e-06 56.2 36 61.1
Cpa.g.sc0.119 Carica papaya HOM05D000004 ORTHO05D000563 2.5e-06 55.8 72 37.5
SHI33683 Sapria himalayana HOM05D000004 ORTHO05D000563 2.5e-06 55.8 57 45.6
Cpa.g.sc1555.2 Carica papaya HOM05D000004 ORTHO05D000563 3.3e-06 55.5 124 33.1
Cpa.g.sc303.2 Carica papaya HOM05D000004 ORTHO05D000563 3.3e-06 55.5 91 37.4
Cpa.g.sc44.39 Carica papaya HOM05D000004 ORTHO05D000563 3.3e-06 55.5 91 38.5
Cpa.g.sc6.80 Carica papaya HOM05D000004 ORTHO05D000563 3.3e-06 55.5 117 34.2
SHI46426 Sapria himalayana HOM05D000004 ORTHO05D000563 3.3e-06 55.5 39 51.3
Cpa.g.sc154.1 Carica papaya HOM05D000004 ORTHO05D000563 4.3e-06 55.1 90 38.9
Cpa.g.sc31.61 Carica papaya HOM05D000004 ORTHO05D000563 4.3e-06 55.1 33 66.7
Cpa.g.sc4.120 Carica papaya HOM05D000004 ORTHO05D000563 4.3e-06 55.1 57 49.1
Cpa.g.sc949.4 Carica papaya HOM05D000004 ORTHO05D000563 5.6e-06 54.7 77 42.9
TPR.G29503 Trifolium pratense HOM05D000004 ORTHO05D000002 5.6e-06 54.7 36 52.8
Atru.chr8.715 Acer truncatum HOM05D000004 ORTHO05D000563 7.4e-06 54.3 135 28.1
MSTRG.13863 Avicennia marina HOM05D000004 ORTHO05D000563 7.4e-06 54.3 70 42.9
MSTRG.20360 Avicennia marina HOM05D000004 ORTHO05D000002 7.4e-06 54.3 55 45.5
Cpa.g.sc2811.2 Carica papaya HOM05D000004 ORTHO05D000002 7.4e-06 54.3 83 39.8
THA.LOC104807122 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 7.4e-06 54.3 41 48.8
Cpa.g.sc143.13 Carica papaya HOM05D000004 ORTHO05D000563 9.6e-06 53.9 33 63.6
Cpa.g.sc203.12 Carica papaya HOM05D000004 ORTHO05D000563 9.6e-06 53.9 43 58.1
Cpa.g.sc28.99 Carica papaya HOM05D000004 ORTHO05D000563 9.6e-06 53.9 33 60.6
Cpa.g.sc949.2 Carica papaya HOM05D000004 ORTHO05D000563 9.6e-06 53.9 47 48.9


User provided reference genes

Program Settings