Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc41.24 Carica papaya HOM05D005795 ORTHO05D007200 8.4e-41 169.9 82 100.0
Cpa.g.sc41.30 Carica papaya HOM05D005795 ORTHO05D007200 1.9e-29 132.1 127 59.8
Dinv44196 Davidia involucrata HOM05D005795 ORTHO05D007200 5.8e-18 94.0 128 45.3
Atru.chr3.1532 Acer truncatum HOM05D005795 ORTHO05D007200 4.9e-17 90.9 128 41.4
Atru.chr3.1535 Acer truncatum HOM05D005795 ORTHO05D007200 4.9e-17 90.9 128 41.4
Thecc.04G314000 Theobroma cacao HOM05D005795 ORTHO05D007200 6.5e-17 90.5 128 44.5
Hma1.2p1_0754F.1_g213060 Hydrangea macrophylla HOM05D005795 ORTHO05D007200 8.4e-17 90.1 126 41.3
Actinidia11305 Actinidia chinensis HOM05D005795 ORTHO05D007200 1.4e-16 89.4 127 42.5
Duzib212G0505 Durio zibethinus HOM05D005795 ORTHO05D007200 2.5e-16 88.6 128 42.2
Ciclev10021008m.g Citrus clementina HOM05D005795 ORTHO05D007200 3.2e-16 88.2 127 42.5
Manes.04G041300 Manihot esculenta HOM05D005795 ORTHO05D007200 3.2e-16 88.2 123 43.1
Sed0015939 Sechium edule HOM05D005795 ORTHO05D007200 3.2e-16 88.2 124 41.1
Gohir.D05G287100 Gossypium hirsutum HOM05D005795 ORTHO05D007200 4.2e-16 87.8 126 41.3
COL.COLO4_21665 Corchorus olitorius HOM05D005795 ORTHO05D007200 1.2e-15 86.3 128 41.4
Sabra07G0103500 Salix brachista HOM05D005795 ORTHO05D007200 1.6e-15 85.9 128 40.6
Actinidia35971 Actinidia chinensis HOM05D005795 ORTHO05D007200 3.5e-15 84.7 124 41.1
Gorai.009G302100 Gossypium raimondii HOM05D005795 ORTHO05D007200 3.5e-15 84.7 126 40.5
MELO3C017720.2 Cucumis melo HOM05D005795 ORTHO05D007200 4.6e-15 84.3 125 40.0
Gohir.A05G286100 Gossypium hirsutum HOM05D005795 ORTHO05D007200 7.9e-15 83.6 126 39.7
Rhsim02G0076300 Rhododendron simsii HOM05D005795 ORTHO05D007200 7.9e-15 83.6 122 40.2
TAR633G0878 Trochodendron aralioides HOM05D005795 ORTHO05D007200 1.3e-14 82.8 123 42.3
Aqoxy2G04090 Aquilegia oxysepala HOM05D005795 ORTHO05D007200 2.3e-14 82.0 124 38.7
GSVIVG01010747001 Vitis vinifera HOM05D005795 ORTHO05D007200 2.3e-14 82.0 123 40.7
DCAR_003909 Daucus carota HOM05D005795 ORTHO05D007200 3.9e-14 81.3 122 37.7
Potri.007G127500 Populus trichocarpa HOM05D005795 ORTHO05D007200 3.9e-14 81.3 126 38.1
Sc03g0006720 Simmondsia chinensis HOM05D005795 ORTHO05D007200 3.9e-14 81.3 123 41.5
CSS0047301 Camellia sinensis var. sinensis HOM05D005795 ORTHO05D007200 6.7e-14 80.5 128 39.1
CsaV3_4G003310 Cucumis sativus L. HOM05D005795 ORTHO05D007200 6.7e-14 80.5 125 38.4
CiPaw.01G101200 Carya illinoinensis HOM05D005795 ORTHO05D007200 8.7e-14 80.1 128 39.8
Nn1g09576 Nelumbo nucifera HOM05D005795 ORTHO05D007200 1.1e-13 79.7 123 40.7
Psat1g007200 Pisum sativum HOM05D005795 ORTHO05D007200 1.9e-13 79.0 128 35.2
Hund03150 Selenicereus undatus HOM05D005795 ORTHO05D007200 2.5e-13 78.6 123 40.7
TWI38G2022 Tripterygium wilfordii HOM05D005795 ORTHO05D007200 2.5e-13 78.6 123 37.4
Medtr2g098650 Medicago truncatula HOM05D005795 ORTHO05D007200 3.3e-13 78.2 128 35.9
BcaC06g33415 Brassica carinata HOM05D005795 ORTHO05D007200 4.3e-13 77.8 82 54.9
Lj6A56T30 Lonicera japonica HOM05D005795 ORTHO05D007200 4.3e-13 77.8 122 38.5
PSO675G7496 Papaver somniferum HOM05D005795 ORTHO05D007200 9.6e-13 76.6 127 36.2
EL10Ac3g05921 Beta vulgaris HOM05D005795 ORTHO05D007200 1.6e-12 75.9 123 38.2
SalBow3G4461 Salvia bowleyana HOM05D005795 ORTHO05D007200 2.8e-12 75.1 122 38.5
Lj3g0002937 Lotus japonicus HOM05D005795 ORTHO05D007200 3.7e-12 74.7 125 34.4
CANSAT78G1297 Cannabis sativa HOM05D005795 ORTHO05D007200 4.8e-12 74.3 125 36.8
Peaxi162Scf00375g00059 Petunia axillaris HOM05D005795 ORTHO05D007200 4.8e-12 74.3 122 36.1
Ah.13g072920 Amaranthus hybridus HOM05D005795 ORTHO05D007200 6.2e-12 73.9 123 37.4
Lalb_Chr22g0352181 Lupinus albus HOM05D005795 ORTHO05D007200 1.1e-11 73.2 127 37.0
Aa31LG10G13730 Aethionema arabicum HOM05D005795 ORTHO05D007200 1.4e-11 72.8 129 37.2
Cc05_g03950 Coffea canephora HOM05D005795 ORTHO05D007200 1.8e-11 72.4 119 37.8
Cc05_g13970 Coffea canephora HOM05D005795 ORTHO05D007200 1.8e-11 72.4 119 37.8
TPR.G18871 Trifolium pratense HOM05D005795 ORTHO05D007200 1.8e-11 72.4 128 34.4
Cc08_g05980 Coffea canephora HOM05D005795 ORTHO05D007200 2.4e-11 72.0 119 37.8
FvH4_4g10680 Fragaria vesca HOM05D005795 ORTHO05D007200 2.4e-11 72.0 116 41.4
FAN07G0438 Fragaria x ananassa HOM05D005795 ORTHO05D007200 2.4e-11 72.0 116 41.4
FAN12G0695 Fragaria x ananassa HOM05D005795 ORTHO05D007200 2.4e-11 72.0 116 41.4
BcaC06g32941 Brassica carinata HOM05D005795 ORTHO05D007200 3.1e-11 71.6 128 37.5
Lsat_1_v5_gn_6_55280 Lactuca sativa HOM05D005795 ORTHO05D007200 3.1e-11 71.6 126 34.1
FAN12G2789 Fragaria x ananassa HOM05D005795 ORTHO05D007200 4.0e-11 71.2 116 41.4
arahy.Tifrunner.gnm1.ann1.LQCR4Y Arachis hypogaea HOM05D005795 ORTHO05D007200 5.3e-11 70.9 123 35.0
Oeu035829.1 Olea europaea HOM05D005795 ORTHO05D007200 5.3e-11 70.9 122 35.2
PSO732G0188 Papaver somniferum HOM05D005795 ORTHO05D007200 5.3e-11 70.9 127 33.1
AL5G41280 Arabidopsis lyrata HOM05D005795 ORTHO05D007200 6.9e-11 70.5 126 35.7
A01p22030 Brassica napus HOM05D005795 ORTHO05D007200 6.9e-11 70.5 128 36.7
BraA01t02109Z Brassica rapa HOM05D005795 ORTHO05D007200 6.9e-11 70.5 128 36.7
Lsat_1_v5_gn_9_14160 Lactuca sativa HOM05D005795 ORTHO05D007200 6.9e-11 70.5 126 34.1
Sp7g13790 Schrenkiella parvula HOM05D005795 ORTHO05D007200 6.9e-11 70.5 128 35.9
Eucgr.A00272 Eucalyptus grandis HOM05D005795 ORTHO05D007200 9.0e-11 70.1 126 35.7
BcaNung00265 Brassica carinata HOM05D005795 ORTHO05D007200 1.2e-10 69.7 126 34.1
CARHR169760 Cardamine hirsuta HOM05D005795 ORTHO05D007200 1.2e-10 69.7 128 35.9
C01p27420 Brassica napus HOM05D005795 ORTHO05D007200 2.0e-10 68.9 128 35.2
BolC1t02678H Brassica oleracea HOM05D005795 ORTHO05D000108 2.0e-10 68.9 128 35.2
Ca_01264_v3 Cicer arietinum L. HOM05D005795 ORTHO05D007200 2.0e-10 68.9 125 32.8
Thhalv10025709m.g Eutrema salsugineum HOM05D005795 ORTHO05D007200 2.0e-10 68.9 128 35.2
THA.LOC104803670 Tarenaya hassleriana HOM05D005795 ORTHO05D007200 2.0e-10 68.9 128 36.7
Glyma.13G343600 Glycine max HOM05D005795 ORTHO05D007200 2.6e-10 68.6 134 33.6
Nitab4.5_0005570g0030 Nicotiana tabacum HOM05D005795 ORTHO05D007200 3.4e-10 68.2 122 34.4
Nitab4.5_0003132g0100 Nicotiana tabacum HOM05D005795 ORTHO05D007200 4.5e-10 67.8 122 34.4
SHI30236 Sapria himalayana HOM05D005795 ORTHO05D007200 4.5e-10 67.8 126 36.5
vmacro15646 Vaccinium macrocarpon HOM05D005795 ORTHO05D007200 5.8e-10 67.4 117 35.0
MSTRG.9769 Avicennia marina HOM05D005795 ORTHO05D007200 7.6e-10 67.0 124 35.5
Eucgr.A00076 Eucalyptus grandis HOM05D005795 ORTHO05D007200 7.6e-10 67.0 128 34.4
Os09g0514400 Oryza sativa ssp. japonica HOM05D005795 ORTHO05D007200 7.6e-10 67.0 120 35.0
ECA233G5655 Erigeron canadensis HOM05D005795 ORTHO05D007200 1.0e-09 66.6 125 32.8
AT3G59380 Arabidopsis thaliana HOM05D005795 ORTHO05D007200 1.3e-09 66.2 126 34.9
Migut.G00958 Erythranthe guttata HOM05D005795 ORTHO05D007200 1.3e-09 66.2 121 37.2
Carub.0005s2612 Capsella rubella HOM05D005795 ORTHO05D007200 1.7e-09 65.9 126 34.9
Phvul.005G152400 Phaseolus vulgaris HOM05D005795 ORTHO05D007200 2.2e-09 65.5 134 31.3
Glyma.15G030700 Glycine max HOM05D005795 ORTHO05D007200 3.8e-09 64.7 134 32.1
MD04G1007300 Malus domestica HOM05D005795 ORTHO05D007200 3.8e-09 64.7 121 33.9
Zm00001eb102710 Zea mays HOM05D005795 ORTHO05D007200 6.5e-09 63.9 125 36.8
unitig_22.g5744 Utricularia gibba HOM05D005795 ORTHO05D007200 1.1e-08 63.2 126 32.5
VMungo1080G0355 Vigna mungo HOM05D005795 ORTHO05D007200 1.1e-08 63.2 134 31.3
QL10p048508 Quercus lobata HOM05D005795 ORTHO05D007200 5.5e-08 60.8 36 75.0
Haze_01529 Corylus avellana HOM05D005795 ORTHO05D007200 1.2e-07 59.7 57 56.1
CAN.G65.180 Capsicum annuum HOM05D005795 ORTHO05D007200 2.1e-07 58.9 37 67.6
SGA_v2.0_scaffold136G34981 Striga asiatica HOM05D005795 ORTHO05D007200 2.1e-07 58.9 124 33.9
HPP92_013540 Vanilla planifolia HOM05D005795 ORTHO05D007200 2.1e-07 58.9 32 75.0
AUR62015400 Chenopodium quinoa HOM05D005795 ORTHO05D007200 2.7e-07 58.5 61 52.5
CDE08G0443 Ceratophyllum demersum HOM05D005795 ORTHO05D007200 6.1e-07 57.4 34 73.5
ClCG07G015610 Citrullus lanatus HOM05D005795 ORTHO05D007200 6.1e-07 57.4 57 57.9
Eucgr.A00077 Eucalyptus grandis HOM05D005795 ORTHO05D007200 6.1e-07 57.4 36 72.2
Solyc06g073390.3 Solanum lycopersicum HOM05D005795 ORTHO05D007200 6.1e-07 57.4 37 64.9
Sopen06g029770 Solanum pennellii HOM05D005795 ORTHO05D007200 6.1e-07 57.4 37 64.9
BcaC09g50250 Brassica carinata HOM05D005795 ORTHO05D007200 7.9e-07 57.0 57 54.4
AUR62002291 Chenopodium quinoa HOM05D005795 ORTHO05D007200 7.9e-07 57.0 61 52.5
Cfa015145 Carpinus fangiana HOM05D005795 ORTHO05D007200 1.0e-06 56.6 57 54.4
SGA_v2.0_scaffold375G50253 Striga asiatica HOM05D005795 ORTHO05D007200 1.8e-06 55.8 124 33.1
ATR0743G276 Amborella trichopoda HOM05D005795 ORTHO05D007200 3.0e-06 55.1 122 32.0
Prupe.1G191500 Prunus persica HOM05D005795 ORTHO05D007200 5.1e-06 54.3 31 74.2
PGSC0003DMG400027009 Solanum tuberosum HOM05D005795 ORTHO05D007200 5.1e-06 54.3 37 59.5


User provided reference genes

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