Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc41.23 Carica papaya HOM05D005795 ORTHO05D007200 1.8e-50 202.2 98 100.0
Rhsim02G0076300 Rhododendron simsii HOM05D005795 ORTHO05D007200 2.2e-27 125.6 87 65.5
CANSAT78G1297 Cannabis sativa HOM05D005795 ORTHO05D007200 2.8e-27 125.2 88 65.9
Cpa.g.sc41.30 Carica papaya HOM05D005795 ORTHO05D007200 3.1e-26 121.7 88 70.5
Lsat_1_v5_gn_6_55280 Lactuca sativa HOM05D005795 ORTHO05D007200 5.3e-26 120.9 113 54.0
Lsat_1_v5_gn_9_14160 Lactuca sativa HOM05D005795 ORTHO05D007200 1.2e-25 119.8 113 54.0
HanXRQChr07g0186111 Helianthus annuus HOM05D005795 ORTHO05D007200 2.6e-25 118.6 95 60.0
vmacro15646 Vaccinium macrocarpon HOM05D005795 ORTHO05D007200 5.9e-25 117.5 78 65.4
DCAR_003909 Daucus carota HOM05D005795 ORTHO05D007200 2.9e-24 115.2 81 64.2
BcaC06g33415 Brassica carinata HOM05D005795 ORTHO05D007200 2.5e-23 112.1 85 64.7
Actinidia35971 Actinidia chinensis HOM05D005795 ORTHO05D007200 9.4e-23 110.2 84 61.9
Hund03150 Selenicereus undatus HOM05D005795 ORTHO05D007200 2.7e-22 108.6 87 60.9
CAN.G65.180 Capsicum annuum HOM05D005795 ORTHO05D007200 8.0e-22 107.1 88 62.5
Glyma.13G343600 Glycine max HOM05D005795 ORTHO05D007200 8.0e-22 107.1 110 49.1
GSVIVG01010747001 Vitis vinifera HOM05D005795 ORTHO05D007200 2.3e-21 105.5 87 55.2
MELO3C017720.2 Cucumis melo HOM05D005795 ORTHO05D007200 5.2e-21 104.4 88 54.5
Sed0015939 Sechium edule HOM05D005795 ORTHO05D007200 6.7e-21 104.0 92 53.3
Sp7g13790 Schrenkiella parvula HOM05D005795 ORTHO05D007200 8.8e-21 103.6 95 51.6
arahy.Tifrunner.gnm1.ann1.LQCR4Y Arachis hypogaea HOM05D005795 ORTHO05D007200 1.5e-20 102.8 88 56.8
CsaV3_4G003310 Cucumis sativus L. HOM05D005795 ORTHO05D007200 2.0e-20 102.4 89 53.9
HPP92_013540 Vanilla planifolia HOM05D005795 ORTHO05D007200 2.0e-20 102.4 97 52.6
CSS0047301 Camellia sinensis var. sinensis HOM05D005795 ORTHO05D007200 4.4e-20 101.3 88 55.7
ClCG07G015610 Citrullus lanatus HOM05D005795 ORTHO05D007200 4.4e-20 101.3 89 53.9
Atru.chr3.1532 Acer truncatum HOM05D005795 ORTHO05D007200 5.7e-20 100.9 88 58.0
Atru.chr3.1535 Acer truncatum HOM05D005795 ORTHO05D007200 5.7e-20 100.9 88 58.0
SGA_v2.0_scaffold375G50253 Striga asiatica HOM05D005795 ORTHO05D007200 5.7e-20 100.9 88 58.0
Cfa015145 Carpinus fangiana HOM05D005795 ORTHO05D007200 9.7e-20 100.1 88 58.0
Actinidia11305 Actinidia chinensis HOM05D005795 ORTHO05D007200 1.3e-19 99.8 88 55.7
A05p02150 Brassica napus HOM05D005795 ORTHO05D007200 1.3e-19 99.8 70 64.3
CiPaw.01G101200 Carya illinoinensis HOM05D005795 ORTHO05D007200 1.3e-19 99.8 88 55.7
AUR62015400 Chenopodium quinoa HOM05D005795 ORTHO05D007200 1.3e-19 99.8 94 51.1
Duzib212G0505 Durio zibethinus HOM05D005795 ORTHO05D007200 1.3e-19 99.8 89 53.9
QL10p048508 Quercus lobata HOM05D005795 ORTHO05D007200 1.7e-19 99.4 88 58.0
Aa31LG10G13730 Aethionema arabicum HOM05D005795 ORTHO05D007200 2.2e-19 99.0 88 53.4
Manes.04G041300 Manihot esculenta HOM05D005795 ORTHO05D007200 2.8e-19 98.6 88 56.8
FAN17G0508 Fragaria x ananassa HOM05D005795 ORTHO05D007200 3.7e-19 98.2 97 52.6
Lalb_Chr22g0352181 Lupinus albus HOM05D005795 ORTHO05D007200 1.1e-18 96.7 81 59.3
BcaNung00265 Brassica carinata HOM05D005795 ORTHO05D007200 1.4e-18 96.3 90 53.3
Ciclev10021008m.g Citrus clementina HOM05D005795 ORTHO05D007200 1.8e-18 95.9 89 51.7
Dinv44196 Davidia involucrata HOM05D005795 ORTHO05D007200 2.4e-18 95.5 65 67.7
Gohir.D05G287100 Gossypium hirsutum HOM05D005795 ORTHO05D007200 2.4e-18 95.5 88 54.5
Gorai.009G302100 Gossypium raimondii HOM05D005795 ORTHO05D007200 2.4e-18 95.5 88 54.5
Sabra07G0103500 Salix brachista HOM05D005795 ORTHO05D007200 2.4e-18 95.5 96 49.0
Haze_01529 Corylus avellana HOM05D005795 ORTHO05D007200 3.1e-18 95.1 88 54.5
Gohir.A05G286100 Gossypium hirsutum HOM05D005795 ORTHO05D007200 3.1e-18 95.1 88 54.5
SGA_v2.0_scaffold136G34981 Striga asiatica HOM05D005795 ORTHO05D007200 3.1e-18 95.1 88 55.7
CARHR169760 Cardamine hirsuta HOM05D005795 ORTHO05D007200 4.1e-18 94.7 88 52.3
Migut.G00958 Erythranthe guttata HOM05D005795 ORTHO05D007200 5.3e-18 94.4 88 50.0
Potri.007G127500 Populus trichocarpa HOM05D005795 ORTHO05D007200 5.3e-18 94.4 97 48.5
THA.LOC104803670 Tarenaya hassleriana HOM05D005795 ORTHO05D007200 5.3e-18 94.4 88 51.1
AT3G59380 Arabidopsis thaliana HOM05D005795 ORTHO05D007200 7.0e-18 94.0 88 52.3
Lj6A56T30 Lonicera japonica HOM05D005795 ORTHO05D007200 7.0e-18 94.0 83 56.6
AL5G41280 Arabidopsis lyrata HOM05D005795 ORTHO05D007200 9.1e-18 93.6 88 52.3
SalBow3G4461 Salvia bowleyana HOM05D005795 ORTHO05D007200 9.1e-18 93.6 88 52.3
C01p27420 Brassica napus HOM05D005795 ORTHO05D007200 1.2e-17 93.2 88 52.3
Ca_01264_v3 Cicer arietinum L. HOM05D005795 ORTHO05D007200 1.2e-17 93.2 89 52.8
Os09g0514400 Oryza sativa ssp. japonica HOM05D005795 ORTHO05D007200 1.6e-17 92.8 90 52.2
Ah.13g072920 Amaranthus hybridus HOM05D005795 ORTHO05D007200 2.0e-17 92.4 87 51.7
Sopen06g029770 Solanum pennellii HOM05D005795 ORTHO05D007200 2.0e-17 92.4 65 69.2
AUR62002291 Chenopodium quinoa HOM05D005795 ORTHO05D007200 2.6e-17 92.0 60 66.7
Thhalv10025709m.g Eutrema salsugineum HOM05D005795 ORTHO05D007200 2.6e-17 92.0 85 52.9
BcaC09g50250 Brassica carinata HOM05D005795 ORTHO05D007200 3.5e-17 91.7 88 51.1
Carub.0005s2612 Capsella rubella HOM05D005795 ORTHO05D007200 3.5e-17 91.7 88 51.1
Duzib151G0649 Durio zibethinus HOM05D005795 ORTHO05D007200 3.5e-17 91.7 69 62.3
Cc08_g05980 Coffea canephora HOM05D005795 ORTHO05D007200 5.9e-17 90.9 64 68.8
TPR.G18871 Trifolium pratense HOM05D005795 ORTHO05D007200 5.9e-17 90.9 89 50.6
COL.COLO4_21665 Corchorus olitorius HOM05D005795 ORTHO05D007200 7.7e-17 90.5 62 69.4
RcHm_v2.0_Chr4g0407031 Rosa chinensis HOM05D005795 ORTHO05D007200 7.7e-17 90.5 88 52.3
SMO137G0277 Selaginella moellendorffii HOM05D005795 ORTHO05D007200 7.7e-17 90.5 81 53.1
MSTRG.9769 Avicennia marina HOM05D005795 ORTHO05D007200 1.0e-16 90.1 88 50.0
Thecc.04G314000 Theobroma cacao HOM05D005795 ORTHO05D007200 1.0e-16 90.1 92 47.8
A01p22030 Brassica napus HOM05D005795 ORTHO05D007200 1.3e-16 89.7 88 51.1
BraA01t02109Z Brassica rapa HOM05D005795 ORTHO05D007200 1.3e-16 89.7 88 51.1
PGSC0003DMG400027009 Solanum tuberosum HOM05D005795 ORTHO05D007200 1.3e-16 89.7 65 67.7
Phvul.005G152400 Phaseolus vulgaris HOM05D005795 ORTHO05D007200 1.7e-16 89.4 83 53.0
Prupe.1G191500 Prunus persica HOM05D005795 ORTHO05D007200 1.7e-16 89.4 88 51.1
Peaxi162Scf00375g00059 Petunia axillaris HOM05D005795 ORTHO05D007200 2.2e-16 89.0 65 67.7
Solyc06g073390.3 Solanum lycopersicum HOM05D005795 ORTHO05D007200 2.2e-16 89.0 65 67.7
Aqoxy2G04090 Aquilegia oxysepala HOM05D005795 ORTHO05D007200 2.9e-16 88.6 65 61.5
Medtr2g098650 Medicago truncatula HOM05D005795 ORTHO05D007200 2.9e-16 88.6 89 50.6
Zm00001eb102710 Zea mays HOM05D005795 ORTHO05D007200 3.8e-16 88.2 90 51.1
EL10Ac3g05921 Beta vulgaris HOM05D005795 ORTHO05D007200 6.5e-16 87.4 61 65.6
Glyma.15G030700 Glycine max HOM05D005795 ORTHO05D007200 6.5e-16 87.4 83 50.6
unitig_22.g5744 Utricularia gibba HOM05D005795 ORTHO05D007200 8.5e-16 87.0 88 47.7
Lj3g0002937 Lotus japonicus HOM05D005795 ORTHO05D007200 1.1e-15 86.7 60 65.0
TWI38G2022 Tripterygium wilfordii HOM05D005795 ORTHO05D007200 1.5e-15 86.3 61 65.6
PSO675G7496 Papaver somniferum HOM05D005795 ORTHO05D007200 1.9e-15 85.9 61 62.3
VMungo1080G0355 Vigna mungo HOM05D005795 ORTHO05D007200 1.9e-15 85.9 88 47.7
Cc05_g13970 Coffea canephora HOM05D005795 ORTHO05D007200 2.5e-15 85.5 59 69.5
Nn1g09576 Nelumbo nucifera HOM05D005795 ORTHO05D007200 2.5e-15 85.5 55 67.3
Eucgr.L02278 Eucalyptus grandis HOM05D005795 ORTHO05D007200 3.2e-15 85.1 70 58.6
PSO732G0188 Papaver somniferum HOM05D005795 ORTHO05D007200 3.2e-15 85.1 60 61.7
MD04G1007300 Malus domestica HOM05D005795 ORTHO05D007200 1.2e-14 83.2 59 61.0
ATR0743G276 Amborella trichopoda HOM05D005795 ORTHO05D007200 1.6e-14 82.8 89 44.9
PGR083G1909 Punica granatum HOM05D005795 ORTHO05D007200 6.1e-14 80.9 61 63.9
FAN07G0438 Fragaria x ananassa HOM05D005795 ORTHO05D007200 3.0e-13 78.6 89 47.2
FvH4_4g10680 Fragaria vesca HOM05D005795 ORTHO05D007200 4.0e-13 78.2 89 47.2
ECA233G5655 Erigeron canadensis HOM05D005795 ORTHO05D007200 6.8e-13 77.4 95 41.1
Pp3c9_24240 Physcomitrium patens HOM05D005795 ORTHO05D007200 5.7e-12 74.3 83 47.0
Mapoly0093s0047 Marchantia polymorpha HOM05D005795 ORTHO05D007200 7.5e-12 73.9 57 57.9
CBR_g21757 Chara braunii HOM05D005795 ORTHO05D007200 9.8e-12 73.6 97 44.3
Nitab4.5_0003132g0100 Nicotiana tabacum HOM05D005795 ORTHO05D007200 1.7e-11 72.8 88 44.3
MCO13G170 Micromonas commoda HOM05D005795 ORTHO05D007200 2.2e-11 72.4 91 40.7
CDE08G0443 Ceratophyllum demersum HOM05D005795 ORTHO05D007200 2.8e-11 72.0 52 59.6
Eucgr.A00077 Eucalyptus grandis HOM05D005795 ORTHO05D007200 2.8e-11 72.0 64 53.1
AagrBONN_evm.TU.Sc2ySwM_228.2319 Anthoceros agrestis HOM05D005795 ORTHO05D007200 8.3e-11 70.5 81 46.9
PRCOL_00002257 Prasinoderma coloniale HOM05D005795 ORTHO05D007200 3.5e-09 65.1 71 50.7
SHI30236 Sapria himalayana HOM05D005795 ORTHO05D007200 4.5e-09 64.7 80 46.2
Cfa027123 Carpinus fangiana HOM05D004239 ORTHO05D005191 5.9e-09 64.3 72 41.7


User provided reference genes

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